; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G005310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G005310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein unc-50 homolog
Genome locationchr03:6255917..6263192
RNA-Seq ExpressionLsi03G005310
SyntenyLsi03G005310
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007881 - UNC-50


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022476.1 Protein unc-50-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-4674.83Show/hide
Query:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA
        MLPTASRGRSSSS+SRANPMYLQYLRRIVK                               +TKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSA+HA
Subjt:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA

Query:  SFVVISVLLFHLLITGAILATCCWLYAFDVHCNSFFPMFVLLY
        +FVVISVLL HLLITGAILATCCWLYAFDVHCNSFFPMFVLLY
Subjt:  SFVVISVLLFHLLITGAILATCCWLYAFDVHCNSFFPMFVLLY

RXH87394.1 hypothetical protein DVH24_034294 [Malus domestica]1.5e-5049.63Show/hide
Query:  MLPTASRGRSSSSSSRANPMYLQYLRRIVKV---SILA--------------------------------ETKNQWARDDPAFVVICSLLLAVATLAYCA
        MLPT SRGRSSSSSSR NPM +QYLRRI+KV   S++                                 +TKNQWARDDPAFVVICS+LLAVATLAYCA
Subjt:  MLPTASRGRSSSSSSRANPMYLQYLRRIVKV---SILA--------------------------------ETKNQWARDDPAFVVICSLLLAVATLAYCA

Query:  AYDHSAAHASFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGTDPLLYITASGGPWLHSIIAIKFA
        AYDHSAAHA FVVISVL FH L  G +LAT C                       WLYAFDVHCNSFFP+       DPL  IT  G  WL S IAIKF 
Subjt:  AYDHSAAHASFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGTDPLLYITASGGPWLHSIIAIKFA

Query:  FHVWGFVLPLYQLFSI---------------AIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEY
         H   F+L L QLFS+               A+ GE++ LP+SN C  CP S+L  + LQ FKI +E+
Subjt:  FHVWGFVLPLYQLFSI---------------AIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEY

RXH99908.1 hypothetical protein DVH24_021710 [Malus domestica]9.1e-5654.51Show/hide
Query:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA
        MLPT SRGRSSSS+SR NPM++QYLRRI+K                               +TKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA
Subjt:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA

Query:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGTDPLLYITASGGPWLHSIIAIKFAFHVWGFVLP
         FVVISVLLFH L  G +LAT C                       WLYAFDVHCNSFFP+       DPL  I+ SG  WLHS IAIKF  H   F+L 
Subjt:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGTDPLLYITASGGPWLHSIIAIKFAFHVWGFVLP

Query:  LYQLFSIAIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEY
        L QL S A+ GE++ LP+SN C  CP S+L  + LQ FKIF+E+
Subjt:  LYQLFSIAIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEY

VVA99219.1 unnamed protein product [Arabis nemorensis]6.6e-4649.42Show/hide
Query:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA
        MLPT SR RSSSSSSRANPM+LQY RRIVK                               +TKNQWARDDPAF+VICSLLL VATLAYCA YDHS++HA
Subjt:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA

Query:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGT----DPLLYITASGGPWLHSIIAIKFA---FH
          VV+SV L H LITGA++ATCC                       WLY FDVHCNSFFPMFVLLY       PLL IT    P L S +        +H
Subjt:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGT----DPLLYITASGGPWLHSIIAIKFA---FH

Query:  VWGFV----LPLYQLFSIAIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEYVL
           F+    L    L+S +IFG N ILPL N    CP     L R+QP KI HE+VL
Subjt:  VWGFV----LPLYQLFSIAIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEYVL

XP_042981288.1 protein unc-50 homolog isoform X1 [Carya illinoinensis]2.9e-4648.26Show/hide
Query:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA
        MLP  SRGRSSSS+SRANP++ QYLRRIVK                               +TKNQWARDDPAFVVICSLLL VATLAYCAAYDHSAAHA
Subjt:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA

Query:  SFVVISVLLFHLLITGAILATCC------------------------WLYAFDVHCNSFFPMFVLL----YGTDPLLYITASGGPWLHSIIAIKFA--FH
         +VVISVLLFH +ITGA++ATC                         WLYAFDVHCNSFFPMFVLL    Y   PLL         L + + +  A  +H
Subjt:  SFVVISVLLFHLLITGAILATCC------------------------WLYAFDVHCNSFFPMFVLL----YGTDPLLYITASGGPWLHSIIAIKFA--FH

Query:  VWGFV------LPLYQLFSIAIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEYVL
           F+      LP+ +  SIA+ GE++ L +SNWC   P+ N     LQ FKI +E +L
Subjt:  VWGFV------LPLYQLFSIAIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEYVL

TrEMBL top hitse value%identityAlignment
A0A0A0K2I1 Uncharacterized protein2.3e-4465.66Show/hide
Query:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA
        MLPTASRGRSSSS+SRANPMYLQYLRRIVK                               +TKNQWARDDPAF+VICSLLLAVATLAYCAAYDHSAAHA
Subjt:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA

Query:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLY
        SFVVISVLLFHLLITGAILATCC                       WLYAFDVHCNSFFPMFVLLY
Subjt:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLY

A0A498IZ60 Uncharacterized protein7.3e-5149.63Show/hide
Query:  MLPTASRGRSSSSSSRANPMYLQYLRRIVKV---SILA--------------------------------ETKNQWARDDPAFVVICSLLLAVATLAYCA
        MLPT SRGRSSSSSSR NPM +QYLRRI+KV   S++                                 +TKNQWARDDPAFVVICS+LLAVATLAYCA
Subjt:  MLPTASRGRSSSSSSRANPMYLQYLRRIVKV---SILA--------------------------------ETKNQWARDDPAFVVICSLLLAVATLAYCA

Query:  AYDHSAAHASFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGTDPLLYITASGGPWLHSIIAIKFA
        AYDHSAAHA FVVISVL FH L  G +LAT C                       WLYAFDVHCNSFFP+       DPL  IT  G  WL S IAIKF 
Subjt:  AYDHSAAHASFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGTDPLLYITASGGPWLHSIIAIKFA

Query:  FHVWGFVLPLYQLFSI---------------AIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEY
         H   F+L L QLFS+               A+ GE++ LP+SN C  CP S+L  + LQ FKI +E+
Subjt:  FHVWGFVLPLYQLFSI---------------AIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEY

A0A498JVJ5 Uncharacterized protein4.4e-5654.51Show/hide
Query:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA
        MLPT SRGRSSSS+SR NPM++QYLRRI+K                               +TKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA
Subjt:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA

Query:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGTDPLLYITASGGPWLHSIIAIKFAFHVWGFVLP
         FVVISVLLFH L  G +LAT C                       WLYAFDVHCNSFFP+       DPL  I+ SG  WLHS IAIKF  H   F+L 
Subjt:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGTDPLLYITASGGPWLHSIIAIKFAFHVWGFVLP

Query:  LYQLFSIAIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEY
        L QL S A+ GE++ LP+SN C  CP S+L  + LQ FKIF+E+
Subjt:  LYQLFSIAIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEY

A0A565BC95 Uncharacterized protein3.2e-4649.42Show/hide
Query:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA
        MLPT SR RSSSSSSRANPM+LQY RRIVK                               +TKNQWARDDPAF+VICSLLL VATLAYCA YDHS++HA
Subjt:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA

Query:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGT----DPLLYITASGGPWLHSIIAIKFA---FH
          VV+SV L H LITGA++ATCC                       WLY FDVHCNSFFPMFVLLY       PLL IT    P L S +        +H
Subjt:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLYGT----DPLLYITASGGPWLHSIIAIKFA---FH

Query:  VWGFV----LPLYQLFSIAIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEYVL
           F+    L    L+S +IFG N ILPL N    CP     L R+QP KI HE+VL
Subjt:  VWGFV----LPLYQLFSIAIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEYVL

A0A6J1D6A1 protein unc-50 homolog5.1e-4465.66Show/hide
Query:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA
        MLPTASRGRSSSSSSRANPMYLQYLRRIVK                               +TKNQWARDDPAFVVICSLLL VATLAYCAAYDHSAAHA
Subjt:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA

Query:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLY
        +FVVISVLLFHLLITGAILATCC                       WLYAFDVHCNSFFPMFVLLY
Subjt:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLY

SwissProt top hitse value%identityAlignment
Q10045 Protein unc-502.8e-0734.45Show/hide
Query:  TKNQWARDDPAFVVICSLLLAVATLAYCAAYD-HSAAHASFVVISVLLFHLLITGAILATCCWL-----------------YAFDVHCNSFFPMFVLLYG
        TK+Q+ARDDPAF+V+ +L L  +++ Y  A         +F + SV +   +  G ++AT  W                  Y FDVH N+FFPM +LL+ 
Subjt:  TKNQWARDDPAFVVICSLLLAVATLAYCAAYD-HSAAHASFVVISVLLFHLLITGAILATCCWL-----------------YAFDVHCNSFFPMFVLLYG

Query:  TDPLLYITASGGPWLHSII
          P+LY T    P   SI+
Subjt:  TDPLLYITASGGPWLHSII

Q53HI1 Protein unc-50 homolog7.4e-0833.66Show/hide
Query:  ETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVISVLLFHLLITGAILATCCWL-------------------YAFDVHCNSFFPMFVLL
        +TK+QWARDDPAF+V+ S+ L V+T+ +    D        +++ V+L   +  G ++AT  W                    YAFDVH N+F+P+ V+L
Subjt:  ETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVISVLLFHLLITGAILATCCWL-------------------YAFDVHCNSFFPMFVLL

Query:  Y
        +
Subjt:  Y

Q54DD7 Protein unc-50 homolog2.1e-1036.19Show/hide
Query:  ETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHS-----------AAHASFVVISVLLFHL--LITGAILATCC----------WLYAFDVHCNSFFPM
        +TKNQWARDDPAF VI    +A+A+++Y   +              A    F+ + +L+  +   +T   L              WLYAFD+HCNSFFP+
Subjt:  ETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHS-----------AAHASFVVISVLLFHL--LITGAILATCC----------WLYAFDVHCNSFFPM

Query:  FVLLY
        F++LY
Subjt:  FVLLY

Q6DKM1 Protein unc-50 homolog A2.8e-0732.67Show/hide
Query:  ETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVISVLLFHLLITGAILATCCWL-------------------YAFDVHCNSFFPMFVLL
        +TK+QWARDDPAF+V+ S+ L V+T+ +    D S      +++ V+    +  G ++AT  W                    Y FDVH N+F+P+ V+L
Subjt:  ETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVISVLLFHLLITGAILATCCWL-------------------YAFDVHCNSFFPMFVLL

Query:  Y
        +
Subjt:  Y

Q7ZUU1 Protein unc-50 homolog1.6e-0731.68Show/hide
Query:  ETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVISVLLFHLLITGAILATCCWL-------------------YAFDVHCNSFFPMFVLL
        +TK+QWARDDPAF+V+ S+ L V+T+ +    D        +++ V+    +  G +++T  W                    YAFDVH N+F+P+ V+L
Subjt:  ETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVISVLLFHLLITGAILATCCWL-------------------YAFDVHCNSFFPMFVLL

Query:  Y
        +
Subjt:  Y

Arabidopsis top hitse value%identityAlignment
AT2G15240.1 UNC-50 family protein1.3e-3954.82Show/hide
Query:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA
        MLPT SR RSSSSSSRANPM+LQY RRIVK                               +TKNQWARDDPAF+VICSLLL VAT+AYC  YDHS++HA
Subjt:  MLPTASRGRSSSSSSRANPMYLQYLRRIVK--------------------------VSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHA

Query:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLY
          VV+SVL  H LITGA++ATCC                       WLY FDVHCNSFFPMFVLLY
Subjt:  SFVVISVLLFHLLITGAILATCC-----------------------WLYAFDVHCNSFFPMFVLLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCCCACAGCTTCCAGAGGGCGCTCCTCGTCCTCTTCATCCCGAGCTAATCCCATGTATCTACAGTACCTTCGTCGAATTGTCAAGGTCTCAATTCTTGCT
GAAACTAAGAATCAGTGGGCACGTGACGATCCTGCTTTTGTTGTGATCTGCAGTCTTCTATTGGCAGTTGCGACTCTGGCTTACTGTGCTGCATATGATCATAGT
GCTGCACATGCCTCTTTTGTAGTTATTTCTGTACTGCTCTTCCATTTGCTAATAACTGGGGCGATTTTGGCAACTTGTTGTTGGCTCTATGCATTTGATGTGCAC
TGCAATTCTTTCTTCCCAATGTTTGTTTTGCTTTATGGTACTGATCCATTACTTTATATCACCGCTTCTGGTGGCCCATGGCTTCATTCCATTATTGCTATCAAA
TTTGCTTTTCATGTTTGGGGCTTCGTATTACCATTATATCAACTTTTTAGTATTGCCATTTTTGGAGAAAACTACATTCTTCCTCTATCCAATTGGTGTGGTCTT
TGTCCTTACTCCAATCTTCATCTTGATCGGCTTCAACCCTTCAAGATATTTCATGAATATGTACTTTAG
mRNA sequenceShow/hide mRNA sequence
AACTTGGGCCAAAATCATTTTTAACATTTGGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCATTTCCACCTTCCTCGCCCGTTTTCT
GAAACTCGTCGACGGAGAAGAGAAGAGATAGTTTGTTCGGAGAATTCTCAGATCTCAGAGCAAATAAGTGGCTACAACAATTCTGTCGCCGGAGAAAGAAGGACG
CGCAATTTGAAGCAAACAGAGATGTTGCCCACAGCTTCCAGAGGGCGCTCCTCGTCCTCTTCATCCCGAGCTAATCCCATGTATCTACAGTACCTTCGTCGAATT
GTCAAGGTCTCAATTCTTGCTGAAACTAAGAATCAGTGGGCACGTGACGATCCTGCTTTTGTTGTGATCTGCAGTCTTCTATTGGCAGTTGCGACTCTGGCTTAC
TGTGCTGCATATGATCATAGTGCTGCACATGCCTCTTTTGTAGTTATTTCTGTACTGCTCTTCCATTTGCTAATAACTGGGGCGATTTTGGCAACTTGTTGTTGG
CTCTATGCATTTGATGTGCACTGCAATTCTTTCTTCCCAATGTTTGTTTTGCTTTATGGTACTGATCCATTACTTTATATCACCGCTTCTGGTGGCCCATGGCTT
CATTCCATTATTGCTATCAAATTTGCTTTTCATGTTTGGGGCTTCGTATTACCATTATATCAACTTTTTAGTATTGCCATTTTTGGAGAAAACTACATTCTTCCT
CTATCCAATTGGTGTGGTCTTTGTCCTTACTCCAATCTTCATCTTGATCGGCTTCAACCCTTCAAGATATTTCATGAATATGTACTTTAGTCAGAACTTATAAAT
CTCGACTTACGGATTCGGCTACAACTTGCTTATCTTGAGGCATGACGATTGATAGATCAAAAGATTTCATCGACACAAGTCACTAATGACTGCATTTATTTTTTC
ACTTGCATCTTGAAAGAAATGAGGAAGTCCCGGGTCGTTAGAGCCATAGCTGCTAATTTTTCAGGCCTTTCACGAGCGATATCAGGAATTGTAGGGTAGGATCTT
GGTATCTTGTGCATCACGGCTGCAAGTGAGGTGATGCGGCTGAATTTTTGATGAAATAGATGTGTTGAATGTAATGATTTTTACCTTATACATTTTGTTTTTGCA
GTTTACACATATACACTTGAAAGAAATTTAATTCCATCAGGCTTTCTGAATATGTATCTGCAGATTCGTTTGTTAATGTGCAGAGACCATTTATTTGGCTCGCTT
AACGCTGCTTTCCAGTTGACAAGAAACAGGTGTATTCCCTTTCCCATCTTTGTTCAATGCCTGGTAAAAGTATGTCTTATGAAAGTGCAAATGACACCGGAAAAT
GGTGCGGTTGACCTAAATTTTGGGCCTAATATGGAATTTGTCCCGACTTTTTAA
Protein sequenceShow/hide protein sequence
MLPTASRGRSSSSSSRANPMYLQYLRRIVKVSILAETKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSAAHASFVVISVLLFHLLITGAILATCCWLYAFDVH
CNSFFPMFVLLYGTDPLLYITASGGPWLHSIIAIKFAFHVWGFVLPLYQLFSIAIFGENYILPLSNWCGLCPYSNLHLDRLQPFKIFHEYVL