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Lsi03G005460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G005460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:6603937..6609234
RNA-Seq ExpressionLsi03G005460
SyntenyLsi03G005460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148697.1 uncharacterized protein LOC111017298 [Momordica charantia]1.6e-1657.8Show/hide
Query:  KTEMENIEAEEEDESSKDVDTKPKVAM--NPSCDYVST-RTSGKPECSDQPKGEGGSSNPSASIETTKSGPELERMQKNEIDKMVKALHRRVEELEEKMR
        + EMEN +  EEDES KDVD K KV M  NPSCDYVST R SG+ E SD+ KGEGG S PSA   TTK  P+ ER Q+ E ++ +K L+RR++ELEE++R
Subjt:  KTEMENIEAEEEDESSKDVDTKPKVAM--NPSCDYVST-RTSGKPECSDQPKGEGGSSNPSASIETTKSGPELERMQKNEIDKMVKALHRRVEELEEKMR

Query:  -QQFPPNSE
         +Q PP SE
Subjt:  -QQFPPNSE
TrEMBL top hitse value%identityAlignment
A0A6J1D4R5 uncharacterized protein LOC1110172987.5e-1757.8Show/hide
Query:  KTEMENIEAEEEDESSKDVDTKPKVAM--NPSCDYVST-RTSGKPECSDQPKGEGGSSNPSASIETTKSGPELERMQKNEIDKMVKALHRRVEELEEKMR
        + EMEN +  EEDES KDVD K KV M  NPSCDYVST R SG+ E SD+ KGEGG S PSA   TTK  P+ ER Q+ E ++ +K L+RR++ELEE++R
Subjt:  KTEMENIEAEEEDESSKDVDTKPKVAM--NPSCDYVST-RTSGKPECSDQPKGEGGSSNPSASIETTKSGPELERMQKNEIDKMVKALHRRVEELEEKMR

Query:  -QQFPPNSE
         +Q PP SE
Subjt:  -QQFPPNSE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATAAAAACAGAGATGGAAAACATAGAAGCAGAGGAGGAGGATGAGTCGTCCAAGGATGTTGATACTAAGCCTAAGGTGGCCATGAATCCTAGTTGTGATTATGT
CTCGACTCGAACATCGGGGAAACCGGAATGCTCTGATCAACCGAAGGGAGAAGGTGGTTCGAGTAATCCTAGCGCAAGCATTGAGACAACAAAATCTGGTCCTGAACTAG
AGAGAATGCAAAAGAATGAAATTGATAAGATGGTCAAAGCGTTACATCGACGTGTTGAGGAGTTGGAAGAGAAAATGCGACAACAGTTTCCTCCCAATTCCGAGACAATT
GAAATTGTTTCACTCATAGAAGGATATTTTGTACAGCCTACATTAGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACATAAAAACAGAGATGGAAAACATAGAAGCAGAGGAGGAGGATGAGTCGTCCAAGGATGTTGATACTAAGCCTAAGGTGGCCATGAATCCTAGTTGTGATTATGT
CTCGACTCGAACATCGGGGAAACCGGAATGCTCTGATCAACCGAAGGGAGAAGGTGGTTCGAGTAATCCTAGCGCAAGCATTGAGACAACAAAATCTGGTCCTGAACTAG
AGAGAATGCAAAAGAATGAAATTGATAAGATGGTCAAAGCGTTACATCGACGTGTTGAGGAGTTGGAAGAGAAAATGCGACAACAGTTTCCTCCCAATTCCGAGACAATT
GAAATTGTTTCACTCATAGAAGGATATTTTGTACAGCCTACATTAGTATAA
Protein sequenceShow/hide protein sequence
MNIKTEMENIEAEEEDESSKDVDTKPKVAMNPSCDYVSTRTSGKPECSDQPKGEGGSSNPSASIETTKSGPELERMQKNEIDKMVKALHRRVEELEEKMRQQFPPNSETI
EIVSLIEGYFVQPTLV