; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G005510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G005510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCaspase-6 protein
Genome locationchr03:6683213..6686960
RNA-Seq ExpressionLsi03G005510
SyntenyLsi03G005510
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136952.1 uncharacterized protein LOC101219067 isoform X1 [Cucumis sativus]2.6e-4394.12Show/hide
Query:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRP--PPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQ
        MAWRSGSLSRTL+S VRSSSSRL+SSAPQLRP  PPL APRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQ
Subjt:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRP--PPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQ

Query:  DR
        DR
Subjt:  DR

XP_008455007.1 PREDICTED: uncharacterized protein LOC103495285 isoform X1 [Cucumis melo]2.0e-4396Show/hide
Query:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR
        MAWRSGSLSRTL+STVRSSSSRL+SSAPQLR PPL APRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR
Subjt:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR

XP_022148806.1 uncharacterized protein LOC111017370 isoform X1 [Momordica charantia]6.9e-4493Show/hide
Query:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR
        MAWRSGSLSRTL+STVRSSSSRLT S PQLRPPP+ APRRLPGRHFSAASRSLGELGC+QSFLPIYSMTAA+CLTSHLTVNVRAFCELSHGTFCRTCQDR
Subjt:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR

XP_022927655.1 uncharacterized protein LOC111434477 isoform X1 [Cucurbita moschata]1.2e-4393Show/hide
Query:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR
        MAWRSGSLSRTLMSTVRSSSSRLT SAPQLRPPP+ APRRLP RHFSA SRSLGELGCVQSFLPIYS+TAASCLTSHLT+NVRAFCELSHGTFCRTCQDR
Subjt:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR

XP_038888391.1 uncharacterized protein LOC120078240 isoform X1 [Benincasa hispida]8.2e-4595Show/hide
Query:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR
        MAWRSGS+SRTLMSTVRSSSSR++SS PQLRPPPL APRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR
Subjt:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR

TrEMBL top hitse value%identityAlignment
A0A1S3BZZ8 uncharacterized protein LOC103495285 isoform X19.8e-4496Show/hide
Query:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR
        MAWRSGSLSRTL+STVRSSSSRL+SSAPQLR PPL APRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR
Subjt:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR

A0A6J1D533 uncharacterized protein LOC111017370 isoform X21.6e-3892.39Show/hide
Query:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT
        MAWRSGSLSRTL+STVRSSSSRLT S PQLRPPP+ APRRLPGRHFSAASRSLGELGC+QSFLPIYSMTAA+CLTSHLTVNVRAFCELSHGT
Subjt:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT

A0A6J1D623 uncharacterized protein LOC111017370 isoform X13.4e-4493Show/hide
Query:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR
        MAWRSGSLSRTL+STVRSSSSRLT S PQLRPPP+ APRRLPGRHFSAASRSLGELGC+QSFLPIYSMTAA+CLTSHLTVNVRAFCELSHGTFCRTCQDR
Subjt:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR

A0A6J1EPK9 uncharacterized protein LOC111434477 isoform X15.7e-4493Show/hide
Query:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR
        MAWRSGSLSRTLMSTVRSSSSRLT SAPQLRPPP+ APRRLP RHFSA SRSLGELGCVQSFLPIYS+TAASCLTSHLT+NVRAFCELSHGTFCRTCQDR
Subjt:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR

A0A6J1JIV5 uncharacterized protein LOC111486212 isoform X11.7e-4392Show/hide
Query:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR
        MAWRSGSLSRTLMSTVRSSSSRLT SAPQLRPPP+  PRRLP RHFSA SRSLGELGCVQSFLPIYS+TAASCLTSHLT+NVRAFCELSHGTFCRTCQDR
Subjt:  MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15000.1 unknown protein7.0e-1857.89Show/hide
Query:  MAWR-SGSLSRTLMS-TVRSSSSRL-TSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT
        MAWR +GS +R+ +S T RS S R  T++ P+LRPP  + P R     FS+ SR+LG LGC QSFLP+YS+ A S LTSHL VN+RAFCELS+GT
Subjt:  MAWR-SGSLSRTLMS-TVRSSSSRL-TSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT

AT2G15000.2 unknown protein2.6e-1757.45Show/hide
Query:  MAWR-SGSLSRTLMS-TVRSSSSRL-TSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHG
        MAWR +GS +R+ +S T RS S R  T++ P+LRPP  + P R     FS+ SR+LG LGC QSFLP+YS+ A S LTSHL VN+RAFCELS+G
Subjt:  MAWR-SGSLSRTLMS-TVRSSSSRL-TSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHG

AT2G15000.3 unknown protein2.6e-1757.45Show/hide
Query:  MAWR-SGSLSRTLMS-TVRSSSSRL-TSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHG
        MAWR +GS +R+ +S T RS S R  T++ P+LRPP  + P R     FS+ SR+LG LGC QSFLP+YS+ A S LTSHL VN+RAFCELS+G
Subjt:  MAWR-SGSLSRTLMS-TVRSSSSRL-TSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHG

AT2G15000.4 unknown protein2.7e-2260.19Show/hide
Query:  MAWR-SGSLSRTLMS-TVRSSSSRL-TSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTC
        MAWR +GS +R+ +S T RS S R  T++ P+LRPP  + P R     FS+ SR+LG LGC QSFLP+YS+ A S LTSHL VN+RAFCELS+GTF RTC
Subjt:  MAWR-SGSLSRTLMS-TVRSSSSRL-TSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTC

Query:  QDR
        QDR
Subjt:  QDR

AT2G15000.5 unknown protein2.7e-2260.19Show/hide
Query:  MAWR-SGSLSRTLMS-TVRSSSSRL-TSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTC
        MAWR +GS +R+ +S T RS S R  T++ P+LRPP  + P R     FS+ SR+LG LGC QSFLP+YS+ A S LTSHL VN+RAFCELS+GTF RTC
Subjt:  MAWR-SGSLSRTLMS-TVRSSSSRL-TSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTC

Query:  QDR
        QDR
Subjt:  QDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGCGCTCTGGATCGCTTTCTCGGACGCTAATGTCCACTGTCCGCTCTTCATCTTCCAGGTTAACTTCATCGGCTCCTCAACTCCGCCCGCCGCCGCTCGCTGC
TCCTCGCCGCCTTCCGGGCCGCCATTTCTCTGCTGCTTCCAGGAGCTTGGGAGAATTGGGATGCGTACAATCATTTTTGCCAATTTACAGCATGACAGCAGCTTCCTGCC
TAACATCCCACCTCACTGTTAATGTTAGGGCTTTTTGCGAGTTGTCTCATGGTACCTTCTGCCGTACTTGTCAAGATCGCTAG
mRNA sequenceShow/hide mRNA sequence
TGTACACCACGCAGCTCCGAATTGCCTTGAAACTAAAACCCTCGCAAAGCCCCAACACTGTTACTGTTAGCAACCGCACAACAATCACAGCGTAGAATCGGAGAAGACGA
TGGCTTGGCGCTCTGGATCGCTTTCTCGGACGCTAATGTCCACTGTCCGCTCTTCATCTTCCAGGTTAACTTCATCGGCTCCTCAACTCCGCCCGCCGCCGCTCGCTGCT
CCTCGCCGCCTTCCGGGCCGCCATTTCTCTGCTGCTTCCAGGAGCTTGGGAGAATTGGGATGCGTACAATCATTTTTGCCAATTTACAGCATGACAGCAGCTTCCTGCCT
AACATCCCACCTCACTGTTAATGTTAGGGCTTTTTGCGAGTTGTCTCATGGTACCTTCTGCCGTACTTGTCAAGATCGCTAGTGGTCGCTTTGTACTTAAATTTCAATGG
GATTAAACACAGCTATGTGCGGCAATATGCGGGTGCAGGGGACTCGTGAAGAGTTGATACTTCCGGAGTTTATCCTTTGGAAATAGGATAAAAGTGTTCTTTATTATATT
GTTGATCAGAACAGGGATTAAAACAATTGCTACATGTATCATCGAGCTGTTGTTTCTTGCTCATCGTTACTACGTCTGTCTTTGATTTACTATTTAT
Protein sequenceShow/hide protein sequence
MAWRSGSLSRTLMSTVRSSSSRLTSSAPQLRPPPLAAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGTFCRTCQDR