; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G005700 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G005700
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionQWRF motif-containing protein 2
Genome locationchr03:6879774..6882431
RNA-Seq ExpressionLsi03G005700
SyntenyLsi03G005700
Gene Ontology termsGO:0051225 - spindle assembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005880 - nuclear microtubule (cellular component)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR007573 - QWRF family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031361.1 QWRF motif-containing protein 2 [Cucumis melo var. makuwa]6.9e-6299.24Show/hide
Query:  KISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQCEDFLS
        KISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKA+ADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQCEDFLS
Subjt:  KISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQCEDFLS

Query:  TLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
        TLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
Subjt:  TLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM

XP_004136940.1 QWRF motif-containing protein 2 [Cucumis sativus]6.9e-6295.62Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +V+  +ISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKA+ADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
        EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM

XP_008455028.1 PREDICTED: QWRF motif-containing protein 2 [Cucumis melo]6.9e-6295.62Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +V+  +ISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKA+ADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
        EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM

XP_022148844.1 QWRF motif-containing protein 2-like, partial [Momordica charantia]7.6e-6194.16Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +V+  +ISYLEEWALLDRDHSSS+LGATEALKASTLRLPVVGKA ADIQNLKDAVGSAVDVMQAMASSICSLSSKVE+TNSVVAELVKVTAKERILLQQC
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
        EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM

XP_038888480.1 QWRF motif-containing protein 2-like [Benincasa hispida]6.9e-6295.62Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +V+  +ISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKA+ADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
        EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM

TrEMBL top hitse value%identityAlignment
A0A0A0K7R4 Uncharacterized protein3.3e-6295.62Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +V+  +ISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKA+ADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
        EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM

A0A1S3C019 QWRF motif-containing protein 23.3e-6295.62Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +V+  +ISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKA+ADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
        EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM

A0A5D3C4G1 QWRF motif-containing protein 23.3e-6299.24Show/hide
Query:  KISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQCEDFLS
        KISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKA+ADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQCEDFLS
Subjt:  KISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQCEDFLS

Query:  TLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
        TLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
Subjt:  TLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM

A0A6J1D567 QWRF motif-containing protein 2-like3.7e-6194.16Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +V+  +ISYLEEWALLDRDHSSS+LGATEALKASTLRLPVVGKA ADIQNLKDAVGSAVDVMQAMASSICSLSSKVE+TNSVVAELVKVTAKERILLQQC
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
        EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM

A0A6J1JDT2 QWRF motif-containing protein 24.8e-6193.43Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +V+  +ISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGK++ADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM
        EDFLSTLAAMQVKDCSLRTHILQLNRFPT+QQPNKY+
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM

SwissProt top hitse value%identityAlignment
F4INP9 QWRF motif-containing protein 48.6e-2343.9Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +++  ++  LE+WA+++R+H SS+ GA   L+A+TLRLP+ G   AD+ +LK A+ SA+DVMQ+M SSI SL S++EE N +V++L  +   E  LL +C
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQ
        E+ L++ A M++++ SL+TH++Q
Subjt:  EDFLSTLAAMQVKDCSLRTHILQ

F4K4M0 QWRF motif-containing protein 97.5e-2750.81Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +++  ++ +LEEW ++DR++  S++GA EALK STL LPV   A+ ++Q++KDA+ SAVDVMQAMASSIC L  KV + +S+ AEL +V AK+  +L  C
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQL
         D L+T++A+QV +CSLRT + QL
Subjt:  EDFLSTLAAMQVKDCSLRTHILQL

Q8GXD9 Protein SNOWY COTYLEDON 32.0e-4066.67Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +++ +++ YLEEW+LLDR+HS+S+ GATEALKASTLRLPV GKA+ DIQ+LK AV SAVDVM AM SSI SL+SKVEE NSV+AE+V +T KE +LL+QC
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNR
        + FL+ +AAMQV DCS++THI+QL+R
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNR

Q94AI1 QWRF motif-containing protein 22.0e-4065.62Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +++  ++ +LEEW+LLDRDHSSS+ GATE+LKASTLRLP+VGK + DIQ+LK AV SAVDVMQAM+SSI SL+SKV+E NSV+ E V VTAKE++LL++C
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNRFP
        +  LS +AAMQV DCS++THI+QL+R P
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNRFP

Q9SUH5 AUGMIN subunit 84.4e-2755.56Show/hide
Query:  LEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQCEDFLSTLAA
        LE+WA L+RDH SS++GA   L+A+TLRLP  G   AD ++LK A+ SA+DVMQAM SSI SL SKVEE N +V EL  V  KE  +  +CED L++ A 
Subjt:  LEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQCEDFLSTLAA

Query:  MQVKDCSLRTHILQLNR
        MQ+++CSLRTH++Q  R
Subjt:  MQVKDCSLRTHILQLNR

Arabidopsis top hitse value%identityAlignment
AT1G49890.1 Family of unknown function (DUF566)1.4e-4165.62Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +++  ++ +LEEW+LLDRDHSSS+ GATE+LKASTLRLP+VGK + DIQ+LK AV SAVDVMQAM+SSI SL+SKV+E NSV+ E V VTAKE++LL++C
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNRFP
        +  LS +AAMQV DCS++THI+QL+R P
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNRFP

AT3G19570.1 Family of unknown function (DUF566)9.4e-3365.14Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +++ +++ YLEEW+LLDR+HS+S+ GATEALKASTLRLPV GKA+ DIQ+LK AV SAVDVM AM SSI SL+SKVEE NSV+AE+V +T KE +LL+QC
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAA
        + FL+  A+
Subjt:  EDFLSTLAA

AT3G19570.2 Family of unknown function (DUF566)1.4e-4166.67Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +++ +++ YLEEW+LLDR+HS+S+ GATEALKASTLRLPV GKA+ DIQ+LK AV SAVDVM AM SSI SL+SKVEE NSV+AE+V +T KE +LL+QC
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQLNR
        + FL+ +AAMQV DCS++THI+QL+R
Subjt:  EDFLSTLAAMQVKDCSLRTHILQLNR

AT4G30710.1 Family of unknown function (DUF566)3.1e-2855.56Show/hide
Query:  LEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQCEDFLSTLAA
        LE+WA L+RDH SS++GA   L+A+TLRLP  G   AD ++LK A+ SA+DVMQAM SSI SL SKVEE N +V EL  V  KE  +  +CED L++ A 
Subjt:  LEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQCEDFLSTLAA

Query:  MQVKDCSLRTHILQLNR
        MQ+++CSLRTH++Q  R
Subjt:  MQVKDCSLRTHILQLNR

AT5G43160.1 Family of unknown function (DUF566)5.3e-2850.81Show/hide
Query:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC
        +++  ++ +LEEW ++DR++  S++GA EALK STL LPV   A+ ++Q++KDA+ SAVDVMQAMASSIC L  KV + +S+ AEL +V AK+  +L  C
Subjt:  NVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELVKVTAKERILLQQC

Query:  EDFLSTLAAMQVKDCSLRTHILQL
         D L+T++A+QV +CSLRT + QL
Subjt:  EDFLSTLAAMQVKDCSLRTHILQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTGTGGATTTACAGTACCGCTTAAAATCTTGGGAATTGTCGGGAAAGAAGCTGATTTCCAACCAAATGTCATTCCAAAAAAGATAAGTTATTTGGAAGAATGGGC
TCTTTTAGACAGAGATCACTCAAGCTCCATGCTTGGAGCAACTGAGGCTTTGAAGGCCAGTACTCTACGGCTCCCAGTTGTTGGGAAAGCACTTGCTGATATCCAGAACC
TGAAAGATGCTGTGGGTTCAGCTGTTGATGTTATGCAGGCAATGGCATCTTCAATATGCTCTCTCTCATCTAAGGTAGAAGAAACAAACTCCGTGGTGGCTGAACTGGTT
AAGGTGACGGCAAAGGAACGGATTTTACTTCAACAATGTGAAGATTTTTTGTCCACTTTAGCAGCCATGCAGGTTAAAGATTGTAGCTTGCGAACGCACATATTGCAACT
GAATCGATTTCCAACGAGACAACAGCCTAACAAATACATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTTGTGGATTTACAGTACCGCTTAAAATCTTGGGAATTGTCGGGAAAGAAGCTGATTTCCAACCAAATGTCATTCCAAAAAAGATAAGTTATTTGGAAGAATGGGC
TCTTTTAGACAGAGATCACTCAAGCTCCATGCTTGGAGCAACTGAGGCTTTGAAGGCCAGTACTCTACGGCTCCCAGTTGTTGGGAAAGCACTTGCTGATATCCAGAACC
TGAAAGATGCTGTGGGTTCAGCTGTTGATGTTATGCAGGCAATGGCATCTTCAATATGCTCTCTCTCATCTAAGGTAGAAGAAACAAACTCCGTGGTGGCTGAACTGGTT
AAGGTGACGGCAAAGGAACGGATTTTACTTCAACAATGTGAAGATTTTTTGTCCACTTTAGCAGCCATGCAGGTTAAAGATTGTAGCTTGCGAACGCACATATTGCAACT
GAATCGATTTCCAACGAGACAACAGCCTAACAAATACATGTAGAACTGATATGATCCTGATGATATGACGACTCACTCCTCACCTGTTATTCTACTAACATTACACGGAC
CCCTTTTCGTTTTTTCAACCCGATGGAGGCAGAGACTGAAGTAACAAGAAACAGATTGGTGATTTTTAGGATCTGGGTTTTGAAACCTTCTTGGTGGCTCTTATATTTCT
TCTCTATGTTGTTAAATGTATCTCTTTGTATCTGGAAAAAAGAAAAAGAAAAAGAAAAAGAGAAAGAAAGGAAGAAGATTGCAGGGAATGGCTTTCCATCCCTTTGATTA
GTTATGTAAAAGTGCTGCAATTCTCTATCCCTTTAGCCCACAAGTAAATGCCAATGTTGAATGTGTATATATGTAATGTTCTCATCATTGATGATTCTTGTAGTTTGTGA
ATTCTTGTGACTCATTGGTGAAATAGTCTCCTTTTTCCTTTCCAATATTGCCTCAGAAATTCGTCCCCAGAAACTTTAACCACAGTAAAATTCAAACAATATCTTTAC
Protein sequenceShow/hide protein sequence
MLCGFTVPLKILGIVGKEADFQPNVIPKKISYLEEWALLDRDHSSSMLGATEALKASTLRLPVVGKALADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVVAELV
KVTAKERILLQQCEDFLSTLAAMQVKDCSLRTHILQLNRFPTRQQPNKYM