; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G005800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G005800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptioncDNA FLJ59059
Genome locationchr03:7122195..7131269
RNA-Seq ExpressionLsi03G005800
SyntenyLsi03G005800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAH13514.1 unnamed protein product [Homo sapiens]7.2e-2363.83Show/hide
Query:  NGTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPA
        +G +EPPGITA +LS PP+TPP C SI+SF G  ISSSTVQG  T PE  N+LVPEL  LPK AN   PR +IVG+TATVST  TVVG P  P+
Subjt:  NGTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPA

KYM93630.1 hypothetical protein ALC62_15765 [Cyphomyrmex costatus]3.0e-2958.33Show/hide
Query:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF
        G EEPPGIT +KLSHPPITPP CLSI+SF GM ISSSTV GLFTCPE                      + + G TATVST VTVVGHP  P  AG GGF
Subjt:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF

Query:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSNQT
        N GFPCFPS  S RAVSSPQ+ +P P  +  +
Subjt:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSNQT

KYN19836.1 hypothetical protein ALC57_07882 [Trachymyrmex cornetzi]1.2e-3059.09Show/hide
Query:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF
        G EEPPGIT +KLSHPPITPP CLSI+SF GM ISSSTV GLFTCPE + N+                 + + G TATVST VTVVGHP  P  AG GGF
Subjt:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF

Query:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSNQT
        + GFPCFPS  S RAVSSPQI +P P  +  +
Subjt:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSNQT

KYN44716.1 hypothetical protein ALC56_00711 [Trachymyrmex septentrionalis]8.8e-2958.33Show/hide
Query:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF
        G EEPPGIT +KLSHPPITPP CLSI+SF GM ISSSTV GLFTCPE                     ++   G TATVST VTVVGHP  P  AG GGF
Subjt:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF

Query:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSNQT
        + GFPCFPS  S RAVSSPQI +P P  +  +
Subjt:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSNQT

KYQ47154.1 hypothetical protein ALC60_13900 [Trachymyrmex zeteki]7.9e-3058.33Show/hide
Query:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF
        G EEPPGIT +KLSHPPITPP CLSI+SF GM ISSSTV GLFTCPE + N++                +   G TATVST VTVVGHP  P  AG GGF
Subjt:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF

Query:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSNQT
        + GFPCFPS  S RAVSSPQ+ +P P  +  +
Subjt:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSNQT

TrEMBL top hitse value%identityAlignment
A0A1L8D7U8 Uncharacterized protein (Fragment)4.7e-3664.57Show/hide
Query:  NGTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGG
        +G E PPG+TA + SHPP TPP C SI+SF G+ ISSSTV G+FTCPE   + VPE    PKLANH+ PR +I G TATVSTFVTVVGHP  P  AG GG
Subjt:  NGTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGG

Query:  FNRGFPCFPSRLSNRAVSSPQI-SPHP
        F+ GFPCFPSR S  AVSSPQ+ +P P
Subjt:  FNRGFPCFPSRLSNRAVSSPQI-SPHP

A0A1L8D821 Uncharacterized protein (Fragment)5.5e-3765.35Show/hide
Query:  NGTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGG
        +G E PPG+TA + SHPP TPP C SI+SFSG+ ISSSTV G+FTCPE   + VPE    PKLANH+ PR +I G TATVSTFVTVVGHP  P  AG GG
Subjt:  NGTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGG

Query:  FNRGFPCFPSRLSNRAVSSPQI-SPHP
        F+ GFPCFPSR S  AVSSPQ+ +P P
Subjt:  FNRGFPCFPSRLSNRAVSSPQI-SPHP

A0A2M4A800 Putative secreted protein (Fragment)2.0e-3159.23Show/hide
Query:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF
        G +EPPG+  ++LSHPP  PP C SI+SF+GM ISSSTV G+ T PE  N+ VPEL   PK AN + PR +IVG TATVSTF TVVG P  P  AG GGF
Subjt:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF

Query:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSN
         RG PC PS  S  AVSSPQ+ +P P   N
Subjt:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSN

A0A2M4C0Z4 Putative secreted protein (Fragment)5.4e-3259.23Show/hide
Query:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF
        G ++PPG+  S+LSHPP  PP C SI+SF+GM ISSSTV G+ T PE  N+ VPEL   PK ANH+ PR ++VG TATVSTF TVVG P  P  AG GGF
Subjt:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF

Query:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSN
         RG PC PS  S  AVSSPQ+ +P P   N
Subjt:  NRGFPCFPSRLSNRAVSSPQI-SPHPNSSN

A0A2M4DLJ6 Putative conserved secreted protein1.1e-3262.81Show/hide
Query:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF
        G +EPPG+  S+LSHPP  PP C SI+SF+GM ISSSTV G+ TCPE  N+ VPEL   PK AN + PR +IVG TATVSTF TVVG P  P  AG GGF
Subjt:  GTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGKGGF

Query:  NRGFPCFPSRLSNRAVSSPQI
         RG PC PS  S  AVSSPQ+
Subjt:  NRGFPCFPSRLSNRAVSSPQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGAGGTGCTTGGAGATATCTTGATTGCATCAAGTGGTATAAGCTCTTAGCTCGAATGTTGTTCACAATTGGATCAGTACATCACATCATCATGAAAGCGGACGC
CTCCTCCCACAGTTGTCGCTTGCAGTCAATTGAAGGGTCTGTTGAAGAATTGAAGAAAGGATTTCAAGAAATGCAACAATCTATCGCTCAACTGACGTTGCAAATAAATC
AAATGGTCCTCATTCATCAAAATCAACCAAGAGGAGCACCAGTCATGCGGAATGACCAAACAAACAATCAAGAACCTCAAGAAGTTCAAATAGGACCGTTGCCACATAAT
CTCTTAAAAATTGAAGAAAATCAGAATATGGGAAGACTTCCAGGCAACTTTAGATCGGGGTTTATGATGGAAGATTCGGAATCATCAGACAAAGGCAAATTTGCGGCCTG
GATCAACTCCCGTTCTGCACGTTCTCTAATCCTTCTCTCAAGCTCAGGCCTAAAATTCTTTATAAGACCCTGCACTGGCCAAGCAGCAGCATCACCAAGGGCACAAATGG
TGTGCCCTTCAATCTGCTTGGTAACCTCTTGTAGCATATCAATTTCTTCCAGCTTTGCATTTCCAACTTTCATTCTTTCCATTATCATCCACAGCCATCCTGTACCTTCT
CTGCAGGGAGTGCACTGTCCACAGCTTTCATGCTTCAATGGAACTGAAGAACCTCCGGGAATTACAGCAAGCAAGTTATCCCATCCACCTATAACCCCTCCACAGTGTCT
TTCAATTAATTCCTTTAGTGGAATGCTCATTTCCTCTTCAACAGTGCAAGGTTTATTCACATGTCCCGAGACACAAAACAATTTGGTACCAGAGTTGTTCTTTCTCCCAA
AACTGGCAAACCATTCTGGTCCACGCCTTAAAATAGTAGGAGAAACAGCCACTGTCTCCACATTTGTCACAGTGGTAGGACATCCGTATAATCCTGCATTAGCAGGAAAA
GGAGGCTTCAATCGTGGTTTCCCTTGTTTCCCTTCAAGGCTTTCTAACAGAGCTGTTTCTTCACCACAAATTAGCCCTCATCCCAACTCCAGCAATCAGACAACCCTCCA
AGAGTTTGTGTGGATCATGCCGCATGATTTCCCTGTCCTTACAGGTTCCGGGTTCACTTTCATCAGCATTGACAACAAGATAGGAAGGGCGGCCATCAGATACTTTGGGC
ATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATAAGAGGTGCTTGGAGATATCTTGATTGCATCAAGTGGTATAAGCTCTTAGCTCGAATGTTGTTCACAATTGGATCAGTACATCACATCATCATGAAAGCGGACGC
CTCCTCCCACAGTTGTCGCTTGCAGTCAATTGAAGGGTCTGTTGAAGAATTGAAGAAAGGATTTCAAGAAATGCAACAATCTATCGCTCAACTGACGTTGCAAATAAATC
AAATGGTCCTCATTCATCAAAATCAACCAAGAGGAGCACCAGTCATGCGGAATGACCAAACAAACAATCAAGAACCTCAAGAAGTTCAAATAGGACCGTTGCCACATAAT
CTCTTAAAAATTGAAGAAAATCAGAATATGGGAAGACTTCCAGGCAACTTTAGATCGGGGTTTATGATGGAAGATTCGGAATCATCAGACAAAGGCAAATTTGCGGCCTG
GATCAACTCCCGTTCTGCACGTTCTCTAATCCTTCTCTCAAGCTCAGGCCTAAAATTCTTTATAAGACCCTGCACTGGCCAAGCAGCAGCATCACCAAGGGCACAAATGG
TGTGCCCTTCAATCTGCTTGGTAACCTCTTGTAGCATATCAATTTCTTCCAGCTTTGCATTTCCAACTTTCATTCTTTCCATTATCATCCACAGCCATCCTGTACCTTCT
CTGCAGGGAGTGCACTGTCCACAGCTTTCATGCTTCAATGGAACTGAAGAACCTCCGGGAATTACAGCAAGCAAGTTATCCCATCCACCTATAACCCCTCCACAGTGTCT
TTCAATTAATTCCTTTAGTGGAATGCTCATTTCCTCTTCAACAGTGCAAGGTTTATTCACATGTCCCGAGACACAAAACAATTTGGTACCAGAGTTGTTCTTTCTCCCAA
AACTGGCAAACCATTCTGGTCCACGCCTTAAAATAGTAGGAGAAACAGCCACTGTCTCCACATTTGTCACAGTGGTAGGACATCCGTATAATCCTGCATTAGCAGGAAAA
GGAGGCTTCAATCGTGGTTTCCCTTGTTTCCCTTCAAGGCTTTCTAACAGAGCTGTTTCTTCACCACAAATTAGCCCTCATCCCAACTCCAGCAATCAGACAACCCTCCA
AGAGTTTGTGTGGATCATGCCGCATGATTTCCCTGTCCTTACAGGTTCCGGGTTCACTTTCATCAGCATTGACAACAAGATAGGAAGGGCGGCCATCAGATACTTTGGGC
ATGAATGA
Protein sequenceShow/hide protein sequence
MIRGAWRYLDCIKWYKLLARMLFTIGSVHHIIMKADASSHSCRLQSIEGSVEELKKGFQEMQQSIAQLTLQINQMVLIHQNQPRGAPVMRNDQTNNQEPQEVQIGPLPHN
LLKIEENQNMGRLPGNFRSGFMMEDSESSDKGKFAAWINSRSARSLILLSSSGLKFFIRPCTGQAAASPRAQMVCPSICLVTSCSISISSSFAFPTFILSIIIHSHPVPS
LQGVHCPQLSCFNGTEEPPGITASKLSHPPITPPQCLSINSFSGMLISSSTVQGLFTCPETQNNLVPELFFLPKLANHSGPRLKIVGETATVSTFVTVVGHPYNPALAGK
GGFNRGFPCFPSRLSNRAVSSPQISPHPNSSNQTTLQEFVWIMPHDFPVLTGSGFTFISIDNKIGRAAIRYFGHE