; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G005910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G005910
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLipoxygenase
Genome locationchr03:7318342..7320336
RNA-Seq ExpressionLsi03G005910
SyntenyLsi03G005910
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0034219 - carbohydrate transmembrane transport (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051119 - sugar transmembrane transporter activity (molecular function)
InterPro domainsIPR000907 - Lipoxygenase
IPR013819 - Lipoxygenase, C-terminal
IPR036226 - Lipoxigenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599219.1 Linoleate 9S-lipoxygenase 6, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4289.11Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        + +E  S PEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAAL+ FENFGKQVFEVENRIMERN+DVNLKNR+GPVN+PYTLLLP
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        S
Subjt:  S

XP_022946175.1 linoleate 9S-lipoxygenase 6-like isoform X1 [Cucurbita moschata]2.3e-4289.11Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        + +E  S PEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAAL+ FENFGKQVFEVENRIMERN+DVNLKNR+GPVN+PYTLLLP
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        S
Subjt:  S

XP_023545242.1 linoleate 9S-lipoxygenase 6-like isoform X1 [Cucurbita pepo subsp. pepo]2.3e-4289.11Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        + +E  S PEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAAL+ FENFGKQVFEVENRIMERN+DVNLKNR+GPVN+PYTLLLP
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        S
Subjt:  S

XP_038877838.1 linoleate 9S-lipoxygenase 6-like, partial [Benincasa hispida]4.6e-4391.09Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        + +E  SNPEK FLRTINSQ QTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGK VFEVENRI+ERNKDVNLKNRTGPVNVPYTLLLP
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        S
Subjt:  S

XP_038890867.1 LOW QUALITY PROTEIN: linoleate 9S-lipoxygenase 6-like [Benincasa hispida]2.7e-4391.09Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        + +E  SNPEK FLRTINSQ+QTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGK VFEVENRI+ERNKDVNLKNRTGPVNVPYTLLLP
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A5D3CQJ3 Lipoxygenase4.2e-4289.11Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        + +E  S PEKA+L TINS LQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVE+RI+ERNKDVNLKNRTGPVNVPYTLLLP
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        S
Subjt:  S

A0A6J1G2X4 Lipoxygenase1.1e-4289.11Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        + +E  S PEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAAL+ FENFGKQVFEVENRIMERN+DVNLKNR+GPVN+PYTLLLP
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        S
Subjt:  S

A0A6J1G329 Lipoxygenase1.1e-4289.11Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        + +E  S PEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAAL+ FENFGKQVFEVENRIMERN+DVNLKNR+GPVN+PYTLLLP
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        S
Subjt:  S

A0A6J1KBU1 Lipoxygenase1.1e-4289.11Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        + +E  S PEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAAL+ FENFGKQVFEVENRIMERN+DVNLKNR+GPVN+PYTLLLP
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        S
Subjt:  S

A0A6J1KIF6 Lipoxygenase1.1e-4289.11Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        + +E  S PEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAAL+ FENFGKQVFEVENRIMERN+DVNLKNR+GPVN+PYTLLLP
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
O22507 Probable linoleate 9S-lipoxygenase 71.6e-3061.39Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        D  E + NP+KAFL+TI +QLQTLLGVSL+EILSRH +DE+YLGQR S EWT DK  L  F+ FGK++ ++E +I++RN D  L NR+GPVN PYTLL P
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        +
Subjt:  S

O24379 Linoleate 9S-lipoxygenase 22.7e-3061.39Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        +  E + NP+KAFL+TI +QLQTLLGVSLIEILSRH +DE+YLGQR S EWT DK  L  F+ FGK++ ++E +I++RN D  L NR+GPVN PYTLL P
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        +
Subjt:  S

P38415 Linoleate 9S-lipoxygenase A2.1e-3062.38Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        +  E + NP+KAFL+TI +QLQTLLGVSLIEILSRH +DE+YLGQR S EWT DK  L  FE FG ++ ++E +IM+RN +  L NRTGPVN PYTLL P
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        +
Subjt:  S

Q41238 Linoleate 9S-lipoxygenase 6 (Fragment)2.7e-3061.39Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        +  E + NP+KAFL+TI +QLQTLLGVSLIEILSRH +DE+YLGQR S EWT DK  L  F+ FGK++ ++E +I++RN D  L NR+GPVN PYTLL P
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        +
Subjt:  S

Q43191 Probable linoleate 9S-lipoxygenase 57.2e-3161.39Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        +  E ++NP+KA+L+TI  QLQTLLG+SLIEILSRHASDE+YLGQR S EWT D+  +  FE FGK++ E+E++I++ N D   KNR+GPVNVPYTLL P
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        +
Subjt:  S

Arabidopsis top hitse value%identityAlignment
AT1G17420.1 lipoxygenase 31.2e-1236.73Show/hide
Query:  FRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIE-WTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLPS
        F S+PEK +  ++ S  QT   +++++ LS H+ DE Y+G+R     WT D   +E F  F  ++  +E  I +RN D + +NR G   +PY LL+PS
Subjt:  FRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIE-WTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLPS

AT1G55020.1 lipoxygenase 11.9e-3164.36Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP
        +  E   NP+K FL+TI +QLQTLLG+SLIEILS H+SDEVYLGQR S EW ++K ALE FE FG++V E+E  I ERN D  LKNRTG V +PYTLL P
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLP

Query:  S
        S
Subjt:  S

AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein1.7e-1438.83Show/hide
Query:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIE--WTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLL
        D   F  NP+ +FL ++ +QLQ    +++ E LS H+ DE YL +   ++  W  D+  ++ F  F +++ ++E  I ERNKD  LKNRTG    PY LL
Subjt:  DIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIE--WTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLL

Query:  LPS
        LP+
Subjt:  LPS

AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein2.6e-2858.16Show/hide
Query:  EFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLPS
        E   + + AFL+TI  QLQTLLG+S+IEILS H++DE+YLGQR S  WT+D   LE F+ FGK++  +EN I+ RN D   KNRTGPVN+PYTLL P+
Subjt:  EFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLPS

AT3G45140.1 lipoxygenase 22.4e-1337Show/hide
Query:  IREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLPS
        ++EF  +PEK  L+T  SQ Q  L +  +++LS H+ DE Y+G++    W ++      FE F  ++  +E  I ERN ++ LKNR G   V Y LL P+
Subjt:  IREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGACATAAGAGAATTTCGATCAAATCCTGAGAAGGCTTTTTTGAGAACAATCAATTCACAATTGCAAACACTTCTTGGTGTTTCACTAATTGAAATTTTGTCAAG
GCATGCTTCTGATGAGGTTTATCTTGGACAAAGGGCTAGCATTGAATGGACTTCAGACAAAGCTGCATTGGAAGTGTTTGAGAATTTTGGAAAACAAGTGTTTGAAGTTG
AAAATAGAATTATGGAAAGGAATAAAGATGTCAATCTGAAAAATAGAACTGGACCTGTTAATGTGCCTTACACTTTGCTTCTTCCATCC
mRNA sequenceShow/hide mRNA sequence
ATGTGGGACATAAGAGAATTTCGATCAAATCCTGAGAAGGCTTTTTTGAGAACAATCAATTCACAATTGCAAACACTTCTTGGTGTTTCACTAATTGAAATTTTGTCAAG
GCATGCTTCTGATGAGGTTTATCTTGGACAAAGGGCTAGCATTGAATGGACTTCAGACAAAGCTGCATTGGAAGTGTTTGAGAATTTTGGAAAACAAGTGTTTGAAGTTG
AAAATAGAATTATGGAAAGGAATAAAGATGTCAATCTGAAAAATAGAACTGGACCTGTTAATGTGCCTTACACTTTGCTTCTTCCATCC
Protein sequenceShow/hide protein sequence
MWDIREFRSNPEKAFLRTINSQLQTLLGVSLIEILSRHASDEVYLGQRASIEWTSDKAALEVFENFGKQVFEVENRIMERNKDVNLKNRTGPVNVPYTLLLPS