; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G005950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G005950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationchr03:7372611..7378907
RNA-Seq ExpressionLsi03G005950
SyntenyLsi03G005950
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7399415.1 unnamed protein product [Spirodela intermedia]9.0e-0850Show/hide
Query:  MSFHEQQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP---YPYQGYPPQGYPPLQYPP
        MS++ QQPPPVGVPPPQGYPP  YP  + PP                         + YP QGYP   YP QGYPPQGYPP  YPP
Subjt:  MSFHEQQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP---YPYQGYPPQGYPPLQYPP

THG15937.1 hypothetical protein TEA_008972 [Camellia sinensis var. sinensis]4.0e-0853.12Show/hide
Query:  MSFHEQQPPPVGVPPPQGYPP-----GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP--YPYQGYPPQGYPPLQYPPTNSHNQ
        MS++ QQ PPVGVPPPQGYPP      AYPPP  PP      QG P               + YP QGYP  YP QGYPPQGYPP QYPP   H Q
Subjt:  MSFHEQQPPPVGVPPPQGYPP-----GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP--YPYQGYPPQGYPPLQYPPTNSHNQ

XP_018439307.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Raphanus sativus]1.8e-0856.18Show/hide
Query:  PPVGVPPPQGYPP-----GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPP---LQYPPTNSHNQ
        PPVGVPPPQGYPP      AYPP   PP    P QG P P   YP Q Y       P QGYP P QGYPPQGYPP    QYPP   H+Q
Subjt:  PPVGVPPPQGYPP-----GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPP---LQYPPTNSHNQ

XP_022148855.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]8.0e-4180.36Show/hide
Query:  MSFHEQQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPPLQYPPTNSHNQCTYVVVQSRQQ
        MS+HEQQPPPVGVPPPQGYPPGAYPPPSCPPLHD PAQG+PQ N  YP QEY + YSPYP QGYPYPYQGYPPQGYPP  YP  +S NQCTYVVVQS QQ
Subjt:  MSFHEQQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPPLQYPPTNSHNQCTYVVVQSRQQ

Query:  QQEQQTYGYWES
        QQ QQ   YWES
Subjt:  QQEQQTYGYWES

XP_028066429.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Camellia sinensis]4.0e-0853.12Show/hide
Query:  MSFHEQQPPPVGVPPPQGYPP-----GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP--YPYQGYPPQGYPPLQYPPTNSHNQ
        MS++ QQ PPVGVPPPQGYPP      AYPPP  PP      QG P               + YP QGYP  YP QGYPPQGYPP QYPP   H Q
Subjt:  MSFHEQQPPPVGVPPPQGYPP-----GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP--YPYQGYPPQGYPPLQYPPTNSHNQ

TrEMBL top hitse value%identityAlignment
A0A4V3WPD4 Uncharacterized protein1.9e-0853.12Show/hide
Query:  MSFHEQQPPPVGVPPPQGYPP-----GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP--YPYQGYPPQGYPPLQYPPTNSHNQ
        MS++ QQ PPVGVPPPQGYPP      AYPPP  PP      QG P               + YP QGYP  YP QGYPPQGYPP QYPP   H Q
Subjt:  MSFHEQQPPPVGVPPPQGYPP-----GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP--YPYQGYPPQGYPPLQYPPTNSHNQ

A0A4Y7JPY7 Rhodopsin7.4e-0856.98Show/hide
Query:  MSFHEQQPPPVGVPPPQGYPP------GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPPLQ
        MS++  Q PPVGVPPPQGYPP      GAYPPP  PP      QG PQ    YP Q   Y    YP QGYP P QGYP QGYPP Q
Subjt:  MSFHEQQPPPVGVPPPQGYPP------GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPPLQ

A0A6J0JUU3 Rhodopsin8.7e-0956.18Show/hide
Query:  PPVGVPPPQGYPP-----GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPP---LQYPPTNSHNQ
        PPVGVPPPQGYPP      AYPP   PP    P QG P P   YP Q Y       P QGYP P QGYPPQGYPP    QYPP   H+Q
Subjt:  PPVGVPPPQGYPP-----GAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPP---LQYPPTNSHNQ

A0A6J1D440 cysteine-rich and transmembrane domain-containing protein WIH2-like3.9e-4180.36Show/hide
Query:  MSFHEQQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPPLQYPPTNSHNQCTYVVVQSRQQ
        MS+HEQQPPPVGVPPPQGYPPGAYPPPSCPPLHD PAQG+PQ N  YP QEY + YSPYP QGYPYPYQGYPPQGYPP  YP  +S NQCTYVVVQS QQ
Subjt:  MSFHEQQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPPLQYPPTNSHNQCTYVVVQSRQQ

Query:  QQEQQTYGYWES
        QQ QQ   YWES
Subjt:  QQEQQTYGYWES

A0A7I8KR29 Rhodopsin4.3e-0850Show/hide
Query:  MSFHEQQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP---YPYQGYPPQGYPPLQYPP
        MS++ QQPPPVGVPPPQGYPP  YP  + PP                         + YP QGYP   YP QGYPPQGYPP  YPP
Subjt:  MSFHEQQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP---YPYQGYPPQGYPPLQYPP

SwissProt top hitse value%identityAlignment
O16005 Rhodopsin5.7e-0550Show/hide
Query:  PPVGVPPPQ-GYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPPLQYPPTNSHNQ
        PP G  PPQ GYPP  YPPP  P     P QG P P   YP  +       YP QGYP P QG PPQG PP   PP    NQ
Subjt:  PPVGVPPPQ-GYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPPLQYPPTNSHNQ

P24603 Rhodopsin2.1e-0446.07Show/hide
Query:  MSFHEQQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPPLQYPPTNSHNQ
        M   +QQ P     PPQGYPP  YPPP        P QG       YP Q   Y    YP QGYP P QG PPQG PP   PP    NQ
Subjt:  MSFHEQQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPPLQYPPTNSHNQ

P24639 Annexin A73.3e-0552.5Show/hide
Query:  PPPVGVPPPQGYPP-GAYPP-PSCPPLHDNPAQGNPQPNLAYPLQE-YSYSYSPYPSQGYPYPYQGYPPQGYPPLQ-YPP
        PP  G PP QGYPP   YPP    PP    P Q    P   YP Q+ Y       P QGYP P QGYPPQGYPP Q YPP
Subjt:  PPPVGVPPPQGYPP-GAYPP-PSCPPLHDNPAQGNPQPNLAYPLQE-YSYSYSPYPSQGYPYPYQGYPPQGYPPLQ-YPP

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B4.8e-0440.37Show/hide
Query:  QQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP---YPYQGYPPQGYPPLQYPPTNSHNQCTYVVVQSRQQQQ
        QQPP VGVPP   YP    P  + PP       G P P   YP  +       YP QGYP   YP QGYP QGYP   YPP              +QQQQ
Subjt:  QQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP---YPYQGYPPQGYPPLQYPPTNSHNQCTYVVVQSRQQQQ

Query:  EQQTYGYWE
        ++ + G  E
Subjt:  EQQTYGYWE

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH21.6e-0751.19Show/hide
Query:  PPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPP---LQYPPTNSHNQ
        PPVGVPPPQGYPP  YP  + PP    P QG PQ                YP QG  YP QGYP QGYPP    QYPP   H Q
Subjt:  PPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPP---LQYPPTNSHNQ

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein1.1e-0851.19Show/hide
Query:  PPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPP---LQYPPTNSHNQ
        PPVGVPPPQGYPP  YP  + PP    P QG PQ                YP QG  YP QGYP QGYPP    QYPP   H Q
Subjt:  PPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPP---LQYPPTNSHNQ

AT3G49845.1 unknown protein1.8e-0641.75Show/hide
Query:  MSFHEQQ-----PPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPY--QGYPP----QGYPPLQY---PPTNS
        MS+ + Q     PPP G PP +GYPP  YPPP+  P    P  G P      P Q Y      YP+QGYP P   QG+PP    QG PP  Y   PP N 
Subjt:  MSFHEQQ-----PPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPY--QGYPP----QGYPPLQY---PPTNS

Query:  HNQ
         ++
Subjt:  HNQ

AT5G45350.1 proline-rich family protein4.9e-0442.86Show/hide
Query:  GYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP-------YP----YQGYPPQ----GYPPLQYPPTNS
        GYPP  YPPP   P    P QG P P  AYP   Y     P    GYP       YP    Y GYPP     GYPP  YP  +S
Subjt:  GYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP-------YP----YQGYPPQ----GYPPLQYPPTNS

AT5G45350.2 proline-rich family protein4.9e-0442.86Show/hide
Query:  GYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP-------YP----YQGYPPQ----GYPPLQYPPTNS
        GYPP  YPPP   P    P QG P P  AYP   Y     P    GYP       YP    Y GYPP     GYPP  YP  +S
Subjt:  GYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYP-------YP----YQGYPPQ----GYPPLQYPPTNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTTCATGAGCAGCAACCACCTCCTGTTGGGGTTCCTCCTCCTCAAGGTTATCCTCCGGGAGCTTATCCACCACCATCATGTCCTCCTCTACATGATAAT
CCAGCACAAGGAAATCCCCAACCAAATTTAGCATATCCTCTACAAGAATATTCTTATTCATATTCTCCTTATCCTTCACAAGGATATCCCTATCCCTACCAAGGT
TACCCTCCACAAGGATATCCACCCCTACAATATCCTCCCACAAACTCTCATAATCAATGTACCTATGTTGTAGTTCAATCTCGACAACAACAACAAGAACAACAA
ACTTATGGTTACTGGGAAAGCTGA
mRNA sequenceShow/hide mRNA sequence
AAGATAATGCTTACAATTTCAATGGAGAGGAGGGTTAGGGGTTTAATCCCCCATTAAAGAATAATCAGAAAGAAGTTGAAAAATTAAAGATGAGTTTTCATGAGC
AGCAACCACCTCCTGTTGGGGTTCCTCCTCCTCAAGGTTATCCTCCGGGAGCTTATCCACCACCATCATGTCCTCCTCTACATGATAATCCAGCACAAGGAAATC
CCCAACCAAATTTAGCATATCCTCTACAAGAATATTCTTATTCATATTCTCCTTATCCTTCACAAGGATATCCCTATCCCTACCAAGGTTACCCTCCACAAGGAT
ATCCACCCCTACAATATCCTCCCACAAACTCTCATAATCAATGTACCTATGTTGTAGTTCAATCTCGACAACAACAACAAGAACAACAAACTTATGGTTACTGGG
AAAGCTGAGGTGGTTTCAATTTCCATAAAGATGCAAAGATTAGCGGTTGGGCAAGATACCACATATTCGTCAAGAGCAGAATTTGA
Protein sequenceShow/hide protein sequence
MSFHEQQPPPVGVPPPQGYPPGAYPPPSCPPLHDNPAQGNPQPNLAYPLQEYSYSYSPYPSQGYPYPYQGYPPQGYPPLQYPPTNSHNQCTYVVVQSRQQQQEQQ
TYGYWES