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Lsi03G006030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G006030
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpathogenesis-related protein 1-like
Genome locationchr03:7539878..7540114
RNA-Seq ExpressionLsi03G006030
SyntenyLsi03G006030
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455060.1 PREDICTED: pathogenesis-related protein 1-like [Cucumis melo]2.1e-1179.25Show/hide
Query:  MDLFKLISLSLILS--AISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        M+LFK ISLSLILS   I+F MLP+S AQDSI+DFVDAHNAARA+VGVGPVHW
Subjt:  MDLFKLISLSLILS--AISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

XP_022952656.1 pathogenesis-related protein PRB1-2-like [Cucurbita moschata]5.3e-0773.08Show/hide
Query:  MDLFKLISLSLILSAI-SFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        MDLFK   LSL L  + SFTMLP S AQDS QDFV+AHNAARA+VGVGPV W
Subjt:  MDLFKLISLSLILSAI-SFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

XP_023511418.1 pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]5.3e-0772.55Show/hide
Query:  MDLFKLISLSLILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        MDLFKL SL L+   +SF MLP S AQDS QDFV+AHNAARA+VGVGPV W
Subjt:  MDLFKLISLSLILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

XP_023554776.1 pathogenesis-related protein PRB1-2-like [Cucurbita pepo subsp. pepo]4.0e-0771.15Show/hide
Query:  MDLFKLISLSLILSAI-SFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        MDLFK   LSL L  + SFTMLP S AQDS+QDFV+AHN ARA+VGVGPV W
Subjt:  MDLFKLISLSLILSAI-SFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

XP_031745022.1 pathogenesis-related protein 1 [Cucumis sativus]4.2e-1277.78Show/hide
Query:  MDLFKLISLSLILSAISF---TMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        MDLFK ISLSL+LS +SF   +MLP+SSAQDSIQ+FVDAHN ARA+VGVGPVHW
Subjt:  MDLFKLISLSLILSAISF---TMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

TrEMBL top hitse value%identityAlignment
A0A0A0K2D5 SCP domain-containing protein2.0e-1277.78Show/hide
Query:  MDLFKLISLSLILSAISF---TMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        MDLFK ISLSL+LS +SF   +MLP+SSAQDSIQ+FVDAHN ARA+VGVGPVHW
Subjt:  MDLFKLISLSLILSAISF---TMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

A0A1S3C187 pathogenesis-related protein 1-like1.0e-1179.25Show/hide
Query:  MDLFKLISLSLILS--AISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        M+LFK ISLSLILS   I+F MLP+S AQDSI+DFVDAHNAARA+VGVGPVHW
Subjt:  MDLFKLISLSLILS--AISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

A0A5D3C4Q0 Basic form of pathogenesis-related protein 12.6e-0768Show/hide
Query:  DLFKLISLSLILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        DL K+ISLSL+    S T+   S AQDS QDFVDAHNAARA+VGVGPV W
Subjt:  DLFKLISLSLILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

A0A6J1GKU7 pathogenesis-related protein PRB1-2-like2.6e-0773.08Show/hide
Query:  MDLFKLISLSLILSAI-SFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        MDLFK   LSL L  + SFTMLP S AQDS QDFV+AHNAARA+VGVGPV W
Subjt:  MDLFKLISLSLILSAI-SFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

A0A6J1GME9 pathogenesis-related protein 1-like2.6e-0766.67Show/hide
Query:  MDLFKLISLSLILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        MD+FK   LSL+   +SF MLP S AQDS QDFV+ HNAARA+VGVGPV W
Subjt:  MDLFKLISLSLILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

SwissProt top hitse value%identityAlignment
P35793 Pathogenesis-related protein PRB1-34.4e-0456.1Show/hide
Query:  LILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        L+  A+S  M+  S AQ+S QD+V  HNAARA VGVG V W
Subjt:  LILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

P83834 Pathogenesis-related protein (Fragments)8.8e-0586.36Show/hide
Query:  DFVDAHNAARAKVGVGPVHWCI
        DFVDAHNAARA+VGVGPVHW +
Subjt:  DFVDAHNAARAKVGVGPVHWCI

Q41359 Pathogenesis-related protein PR-1 type1.8e-0554.35Show/hide
Query:  LISLSLILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        L S++L+   ++  M+ YS AQ+S QD+VDAHNAAR+ V VGPV W
Subjt:  LISLSLILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

Q9ZNS4 Pathogenesis-related protein 13.3e-0448.78Show/hide
Query:  LILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        +IL+A+   ++    AQDS QD+V+AHN AR+++GVGP+ W
Subjt:  LILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

Arabidopsis top hitse value%identityAlignment
AT1G50050.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein9.9e-0451.22Show/hide
Query:  LILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        LI+ AISF +L  ++AQ++ QD+++ HN ARA+VGV  V W
Subjt:  LILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

AT2G14580.1 basic pathogenesis-related protein 12.4e-0548.78Show/hide
Query:  LILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        +IL+A+   ++    AQDS QD+V+AHN AR+++GVGP+ W
Subjt:  LILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

AT2G14610.1 pathogenesis-related gene 17.6e-0446.51Show/hide
Query:  LSLILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        L + ++ +   +LP S AQDS QD++  HN AR  VGVGP+ W
Subjt:  LSLILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW

AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein2.0e-0448.89Show/hide
Query:  SLSLILSAISF-TMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW
        S +L L+   F  ++ +  AQDS QDF+  HN ARA+VGVGP+ W
Subjt:  SLSLILSAISF-TMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTTTTAAACTCATCTCCCTTTCTCTTATTCTCTCTGCAATCAGCTTCACCATGCTTCCCTACTCTTCTGCCCAAGACTCAATTCAAGACTTCGTGGATGCCCA
CAACGCTGCTCGTGCCAAAGTCGGAGTCGGGCCTGTCCATTGGTGCATTCTGGCGGACCTTACGGGGAAAATATTGCATGGGGCAGCAGCAACATGGCAGGCACCACCGC
AGTTCGTTTATGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTTTTAAACTCATCTCCCTTTCTCTTATTCTCTCTGCAATCAGCTTCACCATGCTTCCCTACTCTTCTGCCCAAGACTCAATTCAAGACTTCGTGGATGCCCA
CAACGCTGCTCGTGCCAAAGTCGGAGTCGGGCCTGTCCATTGGTGCATTCTGGCGGACCTTACGGGGAAAATATTGCATGGGGCAGCAGCAACATGGCAGGCACCACCGC
AGTTCGTTTATGGGTGA
Protein sequenceShow/hide protein sequence
MDLFKLISLSLILSAISFTMLPYSSAQDSIQDFVDAHNAARAKVGVGPVHWCILADLTGKILHGAAATWQAPPQFVYG