; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G006100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G006100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpathogenesis-related protein 1-like
Genome locationchr03:7650201..7652022
RNA-Seq ExpressionLsi03G006100
SyntenyLsi03G006100
Gene Ontology termsGO:0009607 - response to biotic stimulus (biological process)
GO:0005615 - extracellular space (cellular component)
InterPro domainsIPR001283 - Cysteine-rich secretory protein-related
IPR014044 - CAP domain
IPR018244 - Allergen V5/Tpx-1-related, conserved site
IPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136924.2 pathogenesis-related protein 1 [Cucumis sativus]4.5e-5077.44Show/hide
Query:  MALLKFFLS---LLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQL
        MALL   +S   L    S+  LFTSSIAQD PQ+FV+AHN AR+QVGVGPV WDE VANYAQQYANQ INDCQMVHSNGPYGENLAWSSADLSGT+AVQ+
Subjt:  MALLKFFLS---LLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQL

Query:  WVDEKQFYDYGSNSCVGNECRHYTQVVWKNSLR
        WV+EKQFYDY SNSCV +ECRHYTQVVWKNS++
Subjt:  WVDEKQFYDYGSNSCVGNECRHYTQVVWKNSLR

XP_008455064.1 PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo]4.8e-4469.53Show/hide
Query:  LKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQ
        L   LSL C L TF +  SS+AQDSP+DFVNAHN AR+QVGVGPV WDE VA++A+QYANQ+INDC++VHS GPYGEN+AW   DLSGT AVQ+WV+EKQ
Subjt:  LKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQ

Query:  FYDYGSNSC-VGNECRHYTQVVWKNSLR
        FY+YGSN+C  G  C HYTQVVW+NS+R
Subjt:  FYDYGSNSC-VGNECRHYTQVVWKNSLR

XP_008455066.1 PREDICTED: basic form of pathogenesis-related protein 1 [Cucumis melo]5.7e-5382.17Show/hide
Query:  LLKFF-LSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDE
        LLK   LSLL  L++  +FTSSIAQDSPQDFV+AHN AR+QVGVGPV WDE VANYAQQYANQ INDCQMVHSNGPYGENLAWSSADLSGT+AVQ+WV+E
Subjt:  LLKFF-LSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDE

Query:  KQFYDYGSNSCVGNECRHYTQVVWKNSLR
        KQFYDY SNSCVG+ECRHYTQVVWKNS++
Subjt:  KQFYDYGSNSCVGNECRHYTQVVWKNSLR

XP_022952869.1 pathogenesis-related protein 1-like [Cucurbita moschata]2.9e-4976.92Show/hide
Query:  MALLKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVD
        MAL+   LSLLC LST  +F  S+AQD  QDFV+AHN AR+QVGVGP+QWDE VANYA+QYANQ+ NDCQMVHSNGPYGENLA SSADLS TDAVQ+WV+
Subjt:  MALLKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVD

Query:  EKQFYDYGSNSCVGNECRHYTQVVWKNSLR
        EKQFYDY SNSC+GNECRHYTQVVW  S+R
Subjt:  EKQFYDYGSNSCVGNECRHYTQVVWKNSLR

XP_023554792.1 pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]5.5e-4875.38Show/hide
Query:  MALLKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVD
        MAL    +SLLC LST  +F  S+AQD  QDFV+AHN AR+QVGVGP+QWDE VANYA+QYANQ+  DCQMVHSNGPYGENLA SSADLS TDAVQ+WV+
Subjt:  MALLKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVD

Query:  EKQFYDYGSNSCVGNECRHYTQVVWKNSLR
        EKQFYDY SNSC+GNECRHYTQVVW  S+R
Subjt:  EKQFYDYGSNSCVGNECRHYTQVVWKNSLR

TrEMBL top hitse value%identityAlignment
A0A0A0K7P0 SCP domain-containing protein2.2e-5077.44Show/hide
Query:  MALLKFFLS---LLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQL
        MALL   +S   L    S+  LFTSSIAQD PQ+FV+AHN AR+QVGVGPV WDE VANYAQQYANQ INDCQMVHSNGPYGENLAWSSADLSGT+AVQ+
Subjt:  MALLKFFLS---LLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQL

Query:  WVDEKQFYDYGSNSCVGNECRHYTQVVWKNSLR
        WV+EKQFYDY SNSCV +ECRHYTQVVWKNS++
Subjt:  WVDEKQFYDYGSNSCVGNECRHYTQVVWKNSLR

A0A1S3BZL6 basic form of pathogenesis-related protein 12.8e-5382.17Show/hide
Query:  LLKFF-LSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDE
        LLK   LSLL  L++  +FTSSIAQDSPQDFV+AHN AR+QVGVGPV WDE VANYAQQYANQ INDCQMVHSNGPYGENLAWSSADLSGT+AVQ+WV+E
Subjt:  LLKFF-LSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDE

Query:  KQFYDYGSNSCVGNECRHYTQVVWKNSLR
        KQFYDY SNSCVG+ECRHYTQVVWKNS++
Subjt:  KQFYDYGSNSCVGNECRHYTQVVWKNSLR

A0A5A7SJR7 Pathogenesis-related protein PRB1-2-like2.3e-4469.53Show/hide
Query:  LKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQ
        L   LSL C L TF +  SS+AQDSP+DFVNAHN AR+QVGVGPV WDE VA++A+QYANQ+INDC++VHS GPYGEN+AW   DLSGT AVQ+WV+EKQ
Subjt:  LKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQ

Query:  FYDYGSNSC-VGNECRHYTQVVWKNSLR
        FY+YGSN+C  G  C HYTQVVW+NS+R
Subjt:  FYDYGSNSC-VGNECRHYTQVVWKNSLR

A0A5D3C4Q0 Basic form of pathogenesis-related protein 12.8e-5382.17Show/hide
Query:  LLKFF-LSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDE
        LLK   LSLL  L++  +FTSSIAQDSPQDFV+AHN AR+QVGVGPV WDE VANYAQQYANQ INDCQMVHSNGPYGENLAWSSADLSGT+AVQ+WV+E
Subjt:  LLKFF-LSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDE

Query:  KQFYDYGSNSCVGNECRHYTQVVWKNSLR
        KQFYDY SNSCVG+ECRHYTQVVWKNS++
Subjt:  KQFYDYGSNSCVGNECRHYTQVVWKNSLR

A0A6J1GMZ5 pathogenesis-related protein 1-like1.4e-4976.92Show/hide
Query:  MALLKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVD
        MAL+   LSLLC LST  +F  S+AQD  QDFV+AHN AR+QVGVGP+QWDE VANYA+QYANQ+ NDCQMVHSNGPYGENLA SSADLS TDAVQ+WV+
Subjt:  MALLKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVD

Query:  EKQFYDYGSNSCVGNECRHYTQVVWKNSLR
        EKQFYDY SNSC+GNECRHYTQVVW  S+R
Subjt:  EKQFYDYGSNSCVGNECRHYTQVVWKNSLR

SwissProt top hitse value%identityAlignment
P04284 Pathogenesis-related leaf protein 61.7e-3153.44Show/hide
Query:  MALLKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVD
        M L    L L C L    +F S  AQ+SPQD++  HNDAR+QVGVGP+ WD N+A+ AQ YAN +  DC ++HS    GENLA    D +G  AVQLWV 
Subjt:  MALLKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVD

Query:  EKQFYDYGSNSCV-GNECRHYTQVVWKNSLR
        E+  Y+Y +N CV G +CRHYTQVVW+NS+R
Subjt:  EKQFYDYGSNSCV-GNECRHYTQVVWKNSLR

P11670 Basic form of pathogenesis-related protein 12.9e-3962.18Show/hide
Query:  CALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNS
        C ++   L  SS AQ+SPQD++N HN AR QVGVGP+ WD  +A YAQ YANQ+I DC M+HS+GPYGENLA +   L+   AV++WVDEK+FYDY SNS
Subjt:  CALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNS

Query:  CVGNECRHYTQVVWKNSLR
        CVG  C HYTQVVW+NS+R
Subjt:  CVGNECRHYTQVVWKNSLR

P33154 Pathogenesis-related protein 11.6e-3459.82Show/hide
Query:  LFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCVGNECR
        L   S AQDSPQD++  HN AR  VGVGP+QWDE VA YA+ YA Q   +C+++HS GPYGENLAW S DLSG  AV +WV EK  Y+Y +N+C G  C 
Subjt:  LFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCVGNECR

Query:  HYTQVVWKNSLR
        HYTQVVW+ S+R
Subjt:  HYTQVVWKNSLR

Q08697 Pathogenesis-related protein 1A13.6e-3457.76Show/hide
Query:  TFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCV-G
        TF +F SS AQ   ++F+NAHN AR +VGVGP+ WD+ +A YAQ YANQ+ +DC M+HS+GPYGENLA +   L+   AV++W DEKQ+YDY SN+C  G
Subjt:  TFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCV-G

Query:  NECRHYTQVVWKNSLR
          C HYTQVVW+ S+R
Subjt:  NECRHYTQVVWKNSLR

Q9ZNS4 Pathogenesis-related protein 13.9e-3666.98Show/hide
Query:  AQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCVGNECRHYTQVV
        AQDS QD+VNAHN ARSQ+GVGP+QWDE +A YA+ YANQ   DC++VHS GPYGENLA S  DLSG  AV LWV+EK  Y+Y +N+C G  C HYTQVV
Subjt:  AQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCVGNECRHYTQVV

Query:  WKNSLR
        W+NS+R
Subjt:  WKNSLR

Arabidopsis top hitse value%identityAlignment
AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein1.1e-3051.18Show/hide
Query:  FFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLA-WSSADLSGTDAVQLWVDEKQF
        F    L  ++  FL  ++ AQ++PQD++N+HN AR+QVGV  V WD  +A YA  Y+N +  DC +VHSNGPYGENLA  SS+  S   AV+LWVDEK +
Subjt:  FFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLA-WSSADLSGTDAVQLWVDEKQF

Query:  YDYGSNSCV-GNECRHYTQVVWKNSLR
        Y Y  N+C  G +C HYTQVVW++S++
Subjt:  YDYGSNSCV-GNECRHYTQVVWKNSLR

AT2G14580.1 basic pathogenesis-related protein 12.7e-3766.98Show/hide
Query:  AQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCVGNECRHYTQVV
        AQDS QD+VNAHN ARSQ+GVGP+QWDE +A YA+ YANQ   DC++VHS GPYGENLA S  DLSG  AV LWV+EK  Y+Y +N+C G  C HYTQVV
Subjt:  AQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCVGNECRHYTQVV

Query:  WKNSLR
        W+NS+R
Subjt:  WKNSLR

AT2G14610.1 pathogenesis-related gene 11.2e-3559.82Show/hide
Query:  LFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCVGNECR
        L   S AQDSPQD++  HN AR  VGVGP+QWDE VA YA+ YA Q   +C+++HS GPYGENLAW S DLSG  AV +WV EK  Y+Y +N+C G  C 
Subjt:  LFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCVGNECR

Query:  HYTQVVWKNSLR
        HYTQVVW+ S+R
Subjt:  HYTQVVWKNSLR

AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein3.6e-3754.14Show/hide
Query:  MALLKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVD
        M+LLK  +  L A++   LF  S+A+D  Q F+ AHN+AR++VG+ P+ WD+ VA YA  YANQ+INDC +VHSNGP+GEN+A SS ++S  DA ++W++
Subjt:  MALLKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVD

Query:  EKQFYDYGSNSC---VGNECRHYTQVVWKNSLR
        EKQ+YDY SN+C    G  C HYTQVVWKN++R
Subjt:  EKQFYDYGSNSC---VGNECRHYTQVVWKNSLR

AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein1.5e-3559.32Show/hide
Query:  TFF--LFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCV
        TFF  L     AQDSPQDF+  HN AR++VGVGP++WDE VA YA+ YANQ+  DC M HS+G YGEN+AWSS  ++G  AV +WVDE+  YDY SN+C 
Subjt:  TFF--LFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSNSCV

Query:  -GNECRHYTQVVWKNSLR
           +C HYTQVVW+NS R
Subjt:  -GNECRHYTQVVWKNSLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCCTCAAGTTCTTCCTTTCTCTCCTTTGTGCCTTGAGTACTTTCTTCTTGTTCACCTCCTCCATTGCTCAAGACTCACCTCAGGACTTCGTCAATGCCCACAA
CGATGCTCGTTCCCAGGTTGGCGTCGGACCTGTCCAGTGGGATGAAAACGTGGCAAACTATGCTCAACAGTATGCCAACCAACAAATCAACGACTGCCAAATGGTGCACT
CTAATGGGCCTTATGGGGAGAATCTTGCTTGGAGCTCAGCTGACTTGTCAGGCACCGATGCAGTTCAATTGTGGGTGGATGAGAAACAATTTTATGATTACGGGTCAAAC
TCATGTGTTGGCAATGAGTGTCGCCATTACACTCAGGTGGTCTGGAAAAATTCCCTCCGATATCTCCCACGGCTGCGAAAAGCAGCCCCTAGGACTTCGTTGATGTCCAC
AATGCCGTTCGTGCCGAGTATGGCGTCGGTCCGGTCACTTGGAACGAGACCTTGGCTAAGTATGCTCAAAATTACGCTGAAACTAAGATCGCTACCTGCGAGATGGAGCA
CTCCATGGGACCTTATGGCGAAAACTTGGCTGAAGCATTCAAGACGACAACCGCAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCCTCAAGTTCTTCCTTTCTCTCCTTTGTGCCTTGAGTACTTTCTTCTTGTTCACCTCCTCCATTGCTCAAGACTCACCTCAGGACTTCGTCAATGCCCACAA
CGATGCTCGTTCCCAGGTTGGCGTCGGACCTGTCCAGTGGGATGAAAACGTGGCAAACTATGCTCAACAGTATGCCAACCAACAAATCAACGACTGCCAAATGGTGCACT
CTAATGGGCCTTATGGGGAGAATCTTGCTTGGAGCTCAGCTGACTTGTCAGGCACCGATGCAGTTCAATTGTGGGTGGATGAGAAACAATTTTATGATTACGGGTCAAAC
TCATGTGTTGGCAATGAGTGTCGCCATTACACTCAGGTGGTCTGGAAAAATTCCCTCCGATATCTCCCACGGCTGCGAAAAGCAGCCCCTAGGACTTCGTTGATGTCCAC
AATGCCGTTCGTGCCGAGTATGGCGTCGGTCCGGTCACTTGGAACGAGACCTTGGCTAAGTATGCTCAAAATTACGCTGAAACTAAGATCGCTACCTGCGAGATGGAGCA
CTCCATGGGACCTTATGGCGAAAACTTGGCTGAAGCATTCAAGACGACAACCGCAGAATTGA
Protein sequenceShow/hide protein sequence
MALLKFFLSLLCALSTFFLFTSSIAQDSPQDFVNAHNDARSQVGVGPVQWDENVANYAQQYANQQINDCQMVHSNGPYGENLAWSSADLSGTDAVQLWVDEKQFYDYGSN
SCVGNECRHYTQVVWKNSLRYLPRLRKAAPRTSLMSTMPFVPSMASVRSLGTRPWLSMLKITLKLRSLPARWSTPWDLMAKTWLKHSRRQPQN