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Lsi03G006140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G006140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpathogenesis-related protein 1C-like isoform X1
Genome locationchr03:7677293..7677814
RNA-Seq ExpressionLsi03G006140
SyntenyLsi03G006140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022988223.1 pathogenesis-related protein 1C-like isoform X1 [Cucurbita maxima]4.5e-0660Show/hide
Query:  SSTPTTMLVPRLALDLSSGMKTWQTTLNSMPTKKSTNAKWCTLMGLMGRI
        +S PTT+LVP+L L LS+GM++WQTT N+M    S  A WCT +GLMGRI
Subjt:  SSTPTTMLVPRLALDLSSGMKTWQTTLNSMPTKKSTNAKWCTLMGLMGRI
TrEMBL top hitse value%identityAlignment
A0A6J1JLM6 pathogenesis-related protein 1C-like isoform X12.2e-0660Show/hide
Query:  SSTPTTMLVPRLALDLSSGMKTWQTTLNSMPTKKSTNAKWCTLMGLMGRI
        +S PTT+LVP+L L LS+GM++WQTT N+M    S  A WCT +GLMGRI
Subjt:  SSTPTTMLVPRLALDLSSGMKTWQTTLNSMPTKKSTNAKWCTLMGLMGRI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCCTCAAGCTCTCCCTTTCTCTCCTTTGTGTCTTGAGTACTTTCATCTTGTTCACCTCATCCATCGCTCAAGACTCACCTAAGACTTCGTCGACGCCCACAAC
GATGCTCGTGCCCAGGTTGGCGTTGGACTTGTCTAGTGGGATGAAAACGTGGCAAACTACACTCAACAGTATGCCAACCAAGAAATCAACGAATGCCAAATGGTGCACTC
TAATGGGCCTTATGGGGAGAATCTTGCTTGGAGCTCAGCTGACTTGTCAGGCACTGATGCAGTTCAAATATGCAACAAAGGCGGTACCTTCATCACTTGCAACTATGACC
CTAGAGGCAATTATGCAGACCAACGACCATACTAAGAGGGCTTTCCCTGAAGTTACGTTGAAGAGTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCCTCAAGCTCTCCCTTTCTCTCCTTTGTGTCTTGAGTACTTTCATCTTGTTCACCTCATCCATCGCTCAAGACTCACCTAAGACTTCGTCGACGCCCACAAC
GATGCTCGTGCCCAGGTTGGCGTTGGACTTGTCTAGTGGGATGAAAACGTGGCAAACTACACTCAACAGTATGCCAACCAAGAAATCAACGAATGCCAAATGGTGCACTC
TAATGGGCCTTATGGGGAGAATCTTGCTTGGAGCTCAGCTGACTTGTCAGGCACTGATGCAGTTCAAATATGCAACAAAGGCGGTACCTTCATCACTTGCAACTATGACC
CTAGAGGCAATTATGCAGACCAACGACCATACTAAGAGGGCTTTCCCTGAAGTTACGTTGAAGAGTCCATAA
Protein sequenceShow/hide protein sequence
MALLKLSLSLLCVLSTFILFTSSIAQDSPKTSSTPTTMLVPRLALDLSSGMKTWQTTLNSMPTKKSTNAKWCTLMGLMGRILLGAQLTCQALMQFKYATKAVPSSLATMT
LEAIMQTNDHTKRAFPEVTLKSP