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Lsi03G006150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G006150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionbasic form of pathogenesis-related protein 1-like
Genome locationchr03:7678949..7679221
RNA-Seq ExpressionLsi03G006150
SyntenyLsi03G006150
Gene Ontology termsGO:0005615 - extracellular space (cellular component)
InterPro domainsIPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137079.1 basic form of pathogenesis-related protein 1 [Cucumis sativus]9.4e-1682Show/hide
Query:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
        ++ PYGENLAEA E TTAELTVNYWA   KFYDHKSNKCVEEECGHFLQ+
Subjt:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
XP_008455070.1 PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]1.2e-1584Show/hide
Query:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
        ++ PYGENLAEA E TTAELTVNYWA   KFYDHKSNKCVEEECGHFLQV
Subjt:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
XP_022953032.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata]2.0e-1378.72Show/hide
Query:  PYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
        PYGEN+A A E TTAELTVNYWA  KKFY++KSNKC+EEECGHF QV
Subjt:  PYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
XP_022972465.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima]1.5e-1380.85Show/hide
Query:  PYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
        PYGEN+A A E TTAELTVNYWA  KKFY++KSNKCVEEECGHF QV
Subjt:  PYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
XP_038888848.1 basic form of pathogenesis-related protein 1-like [Benincasa hispida]7.2e-1682Show/hide
Query:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
        ++ PYGENLAEA ETTTAELTVNYWA  KKFY+H++NKCVEEECGHFLQV
Subjt:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
TrEMBL top hitse value%identityAlignment
A0A0A0K2C5 SCP domain-containing protein4.5e-1682Show/hide
Query:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
        ++ PYGENLAEA E TTAELTVNYWA   KFYDHKSNKCVEEECGHFLQ+
Subjt:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
A0A1S3C197 basic form of pathogenesis-related protein 1-like5.9e-1684Show/hide
Query:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
        ++ PYGENLAEA E TTAELTVNYWA   KFYDHKSNKCVEEECGHFLQV
Subjt:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
A0A5D3C4I8 Basic form of pathogenesis-related protein 1-like5.9e-1684Show/hide
Query:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
        ++ PYGENLAEA E TTAELTVNYWA   KFYDHKSNKCVEEECGHFLQV
Subjt:  TLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
A0A6J1GM32 basic form of pathogenesis-related protein 1-like9.5e-1478.72Show/hide
Query:  PYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
        PYGEN+A A E TTAELTVNYWA  KKFY++KSNKC+EEECGHF QV
Subjt:  PYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
A0A6J1I8P9 basic form of pathogenesis-related protein 1-like7.3e-1480.85Show/hide
Query:  PYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
        PYGEN+A A E TTAELTVNYWA  KKFY++KSNKCVEEECGHF QV
Subjt:  PYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQV
SwissProt top hitse value%identityAlignment
P07053 Pathogenesis-related protein 1B1.0e-0445.83Show/hide
Query:  YGENLAEAC-ETTTAELTVNYWAGWKKFYDHKSNKCVE-EECGHFLQV
        YGENLA+   +  TA   V  W   K++YDH SN C + + CGH+ QV
Subjt:  YGENLAEAC-ETTTAELTVNYWAGWKKFYDHKSNKCVE-EECGHFLQV
P08299 Pathogenesis-related protein 1A4.5e-0547.92Show/hide
Query:  YGENLAEAC-ETTTAELTVNYWAGWKKFYDHKSNKCVE-EECGHFLQV
        YGENLAE   +  TA   V  W   K++YDH SN C + + CGH+ QV
Subjt:  YGENLAEAC-ETTTAELTVNYWAGWKKFYDHKSNKCVE-EECGHFLQV
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACAATGCCATTCATGCCGAGTATGGCGTTGGGCCGGTCACTTAGAACAAAACCTTGGCTAAGTATGCTCAAAATTACGCTGAAACTAAGATCGCTACCA
GCAAGATGGAGCACTTTGGAACCTTATGGCGAAAACTTGGCCGAAGCATGCGAGACGACAACCGCAGAATTGACAGTGAATTATTGGGCTGGTTGGAAGAAATTT
TACGACCACAAATCAAACAAGTGCGTCGAGGAAGAGTGCGGCCATTTCCTTCAAGTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTACAATGCCATTCATGCCGAGTATGGCGTTGGGCCGGTCACTTAGAACAAAACCTTGGCTAAGTATGCTCAAAATTACGCTGAAACTAAGATCGCTACCA
GCAAGATGGAGCACTTTGGAACCTTATGGCGAAAACTTGGCCGAAGCATGCGAGACGACAACCGCAGAATTGACAGTGAATTATTGGGCTGGTTGGAAGAAATTT
TACGACCACAAATCAAACAAGTGCGTCGAGGAAGAGTGCGGCCATTTCCTTCAAGTTGGTTGA
Protein sequenceShow/hide protein sequence
MPTMPFMPSMALGRSLRTKPWLSMLKITLKLRSLPARWSTLEPYGENLAEACETTTAELTVNYWAGWKKFYDHKSNKCVEEECGHFLQVG