; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G006340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G006340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC116190061
Genome locationchr03:7855211..7855670
RNA-Seq ExpressionLsi03G006340
SyntenyLsi03G006340
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG46251.1 hypothetical protein EZV62_028282 [Acer yangbiense]1.2e-5388.1Show/hide
Query:  METATNYGSWPRQRPRRRGDRSNRERLDD-VFLPGQLSRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWL
        METATNYGSWPRQRPRRRGDRSNRERLDD  +     SRGRSAPCPR  VICS K LLQSDLAG+RSQFAAENKT SERTF+RFFSTKHGSLRITVGRWL
Subjt:  METATNYGSWPRQRPRRRGDRSNRERLDD-VFLPGQLSRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWL

Query:  PKETPIRSAPRLGGIYLIPITRRGSP
        PKETPIRSAPRLGGIYLIPITRRGSP
Subjt:  PKETPIRSAPRLGGIYLIPITRRGSP

XP_015947571.1 uncharacterized protein LOC107472572 [Arachis duranensis]1.1e-3893.26Show/hide
Query:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        SRGRS PCPR RVICSHK LLQSDLAG+RSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAP+LGGIYLIPITRRGSP
Subjt:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

XP_016650442.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107881344 [Prunus mume]1.1e-3894.38Show/hide
Query:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        SRGRSAPCPRI VICS K LLQSDLAG+RSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
Subjt:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

XP_023535322.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111796795 [Cucurbita pepo subsp. pepo]2.4e-4197.75Show/hide
Query:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        SRG SAPCPRIRVICSHKRLLQSDLAG+RSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
Subjt:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

YP_009941480.1 hypothetical protein [Fagus sylvatica]1.9e-4680.31Show/hide
Query:  METATNYGSWPRQRPRRR--GDRSNRERLDDVFLPGQLSRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRW
        METATNYGSWPRQRPRRR    +    R    +     SRGRSAPCPR  VICS K LLQSDLAG+RSQFAAENKT SERTFVRFFSTKHGSLRITVGRW
Subjt:  METATNYGSWPRQRPRRR--GDRSNRERLDDVFLPGQLSRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRW

Query:  LPKETPIRSAPRLGGIYLIPITRRGSP
        LPKETPIRSAPRLGGIYLIPITRRGSP
Subjt:  LPKETPIRSAPRLGGIYLIPITRRGSP

TrEMBL top hitse value%identityAlignment
A0A5C7GNT8 Uncharacterized protein5.8e-5488.1Show/hide
Query:  METATNYGSWPRQRPRRRGDRSNRERLDD-VFLPGQLSRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWL
        METATNYGSWPRQRPRRRGDRSNRERLDD  +     SRGRSAPCPR  VICS K LLQSDLAG+RSQFAAENKT SERTF+RFFSTKHGSLRITVGRWL
Subjt:  METATNYGSWPRQRPRRRGDRSNRERLDD-VFLPGQLSRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWL

Query:  PKETPIRSAPRLGGIYLIPITRRGSP
        PKETPIRSAPRLGGIYLIPITRRGSP
Subjt:  PKETPIRSAPRLGGIYLIPITRRGSP

A0A6P3YYU3 uncharacterized protein LOC1074066441.5e-3894.44Show/hide
Query:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSA-PRLGGIYLIPITRRGSP
        SRGRSAPCPRI VICS KRLLQSDLAG+RSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSA PRLGGIYLIPITRRGSP
Subjt:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSA-PRLGGIYLIPITRRGSP

A0A6P4CAN7 uncharacterized protein LOC1074725725.3e-3993.26Show/hide
Query:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        SRGRS PCPR RVICSHK LLQSDLAG+RSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAP+LGGIYLIPITRRGSP
Subjt:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

A0A6P8BX57 LOW QUALITY PROTEIN: uncharacterized protein LOC1161900612.0e-3893.26Show/hide
Query:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        SRGRSAPCPR  VICS K LLQSDLAG+RSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
Subjt:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

A0A7L7T796 Uncharacterized protein9.0e-4780.31Show/hide
Query:  METATNYGSWPRQRPRRR--GDRSNRERLDDVFLPGQLSRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRW
        METATNYGSWPRQRPRRR    +    R    +     SRGRSAPCPR  VICS K LLQSDLAG+RSQFAAENKT SERTFVRFFSTKHGSLRITVGRW
Subjt:  METATNYGSWPRQRPRRR--GDRSNRERLDDVFLPGQLSRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRW

Query:  LPKETPIRSAPRLGGIYLIPITRRGSP
        LPKETPIRSAPRLGGIYLIPITRRGSP
Subjt:  LPKETPIRSAPRLGGIYLIPITRRGSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07599.1 unknown protein1.6e-4091.01Show/hide
Query:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        SRGRSAPCPR  VICS K LLQSDLAG+RSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSAPR GGIYLIPITRRGSP
Subjt:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

AT2G07599.2 unknown protein1.6e-4091.01Show/hide
Query:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        SRGRSAPCPR  VICS K LLQSDLAG+RSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSAPR GGIYLIPITRRGSP
Subjt:  SRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACAGCAACTAACTATGGCTCTTGGCCCAGACAACGCCCTAGGCGTAGGGGAGATCGGAGCAACAGGGAACGCCTAGACGACGTTTTTCTTCCTGGGCAGCTATC
GAGAGGTCGTTCCGCCCCTTGTCCCCGAATAAGGGTAATATGTTCTCATAAAAGGTTGCTCCAATCTGACCTAGCTGGCAAGCGATCCCAGTTCGCAGCAGAGAACAAGA
CAGGAAGCGAGCGTACCTTTGTTCGCTTCTTCTCCACCAAGCACGGAAGTTTAAGGATAACTGTAGGTCGGTGGCTACCTAAGGAAACTCCGATTCGATCCGCCCCCCGG
CTGGGAGGCATCTACCTCATCCCGATCACAAGGAGAGGTTCACCA
mRNA sequenceShow/hide mRNA sequence
AGTCCTCTCACTACCAACCAGCAGACATCATCTGGCTGGGTCTTGCCGGTATCAACAACAAGAAAAAAAACAAGCAAATGGAAACAGCAACTAACTATGGCTCTTGGCCC
AGACAACGCCCTAGGCGTAGGGGAGATCGGAGCAACAGGGAACGCCTAGACGACGTTTTTCTTCCTGGGCAGCTATCGAGAGGTCGTTCCGCCCCTTGTCCCCGAATAAG
GGTAATATGTTCTCATAAAAGGTTGCTCCAATCTGACCTAGCTGGCAAGCGATCCCAGTTCGCAGCAGAGAACAAGACAGGAAGCGAGCGTACCTTTGTTCGCTTCTTCT
CCACCAAGCACGGAAGTTTAAGGATAACTGTAGGTCGGTGGCTACCTAAGGAAACTCCGATTCGATCCGCCCCCCGGCTGGGAGGCATCTACCTCATCCCGATCACAAGG
AGAGGTTCACCA
Protein sequenceShow/hide protein sequence
METATNYGSWPRQRPRRRGDRSNRERLDDVFLPGQLSRGRSAPCPRIRVICSHKRLLQSDLAGKRSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPR
LGGIYLIPITRRGSP