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Lsi03G006670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G006670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:8463972..8464393
RNA-Seq ExpressionLsi03G006670
SyntenyLsi03G006670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038875137.1 uncharacterized protein LOC120067672 [Benincasa hispida]3.2e-0538.83Show/hide
Query:  DTNKPTNEGMPTRREE--EERCGPLDFDQRDGVNVAPSVYSYLRSIDSFVSKLEGRVSKVD-------EDLSYVKVQLTTITSLLQSLIKDPTMVDSRKS
        ++N P    + + RE   +E C P     R+GVN   S+YSYLR+IDS +S+L+GR+S +D       E+++ +K QL+TI SLLQS+ K   +      
Subjt:  DTNKPTNEGMPTRREE--EERCGPLDFDQRDGVNVAPSVYSYLRSIDSFVSKLEGRVSKVD-------EDLSYVKVQLTTITSLLQSLIKDPTMVDSRKS

Query:  PKP
        P P
Subjt:  PKP

XP_038884017.1 uncharacterized protein LOC120074969 [Benincasa hispida]9.4e-0543.42Show/hide
Query:  QRDGVNVAPSVYSYLRSIDSFVSKLEG-------RVSKVDEDLSYVKVQLTTITSLLQSLIKDPTMVDS-RKSPKP
        +R G N+   +Y YLRSID+ +S+L+G       RVSK++E++  +K QL+TI SLLQS+ K   ++D   +SP P
Subjt:  QRDGVNVAPSVYSYLRSIDSFVSKLEG-------RVSKVDEDLSYVKVQLTTITSLLQSLIKDPTMVDS-RKSPKP

XP_038892557.1 uncharacterized protein LOC120081601 [Benincasa hispida]1.4e-0541.3Show/hide
Query:  TRREEEERCGPLDFDQRDGVNVAPSVYSYLRSIDSFVSKLEG-------RVSKVDEDLSYVKVQLTTITSLLQSLIKDPTM-VDSRKSPKPT
        T R  +E C      +R+G N   S YSYLRSIDS +S+L+G       RVS ++E+++ +K QL+ I SLLQS+ K  T+  +  +SP P+
Subjt:  TRREEEERCGPLDFDQRDGVNVAPSVYSYLRSIDSFVSKLEG-------RVSKVDEDLSYVKVQLTTITSLLQSLIKDPTM-VDSRKSPKPT

XP_038896435.1 uncharacterized protein LOC120084697 [Benincasa hispida]5.5e-0538.95Show/hide
Query:  TRREEEERCGPLDFDQRDGVNVAPSVYSYLRSIDSFVSKLEGRVSKVD-------EDLSYVKVQLTTITSLLQSLIKDPTM-VDSRKSPKPTARL
        T+R  +E C      +R   N   S YSYLRSIDS +S+L+G +S +D       E+++ +K QL+ I SLLQS+ K  T+  ++ +SP P+  L
Subjt:  TRREEEERCGPLDFDQRDGVNVAPSVYSYLRSIDSFVSKLEGRVSKVD-------EDLSYVKVQLTTITSLLQSLIKDPTM-VDSRKSPKPTARL

XP_038906048.1 uncharacterized protein LOC120091949 [Benincasa hispida]2.7e-0442.11Show/hide
Query:  EERCGPLDFDQRDGVNVAPSVYSYLRSIDSFVSKLEGRVSKVD-------EDLSYVKVQLTTITSLLQSLIKDPTM
        +E C P     R+G N   S+YSY+R+IDS +S+L+GR+S +D       E+++ +K QL+ I SLLQS+ K  T+
Subjt:  EERCGPLDFDQRDGVNVAPSVYSYLRSIDSFVSKLEGRVSKVD-------EDLSYVKVQLTTITSLLQSLIKDPTM

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACGAATAAGCCCACGAATGAGGGCATGCCGACAAGGAGGGAGGAGGAGGAGCGATGTGGACCCTTAGACTTTGACCAGAGGGATGGAGTCAATGTTGCA
CCGAGTGTATACTCCTACCTGCGGAGCATTGATAGTTTTGTATCAAAGTTGGAGGGTCGTGTATCAAAGGTCGATGAAGACCTAAGTTACGTGAAAGTACAACTG
ACGACCATTACATCATTGTTACAGTCTTTGATTAAGGATCCCACCATGGTAGATTCGAGGAAGTCCCCCAAGCCCACCGCAAGACTCGGGTTCGAGGAGATCACC
CGCCCCACCCTGCGATCTAGAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACACGAATAAGCCCACGAATGAGGGCATGCCGACAAGGAGGGAGGAGGAGGAGCGATGTGGACCCTTAGACTTTGACCAGAGGGATGGAGTCAATGTTGCA
CCGAGTGTATACTCCTACCTGCGGAGCATTGATAGTTTTGTATCAAAGTTGGAGGGTCGTGTATCAAAGGTCGATGAAGACCTAAGTTACGTGAAAGTACAACTG
ACGACCATTACATCATTGTTACAGTCTTTGATTAAGGATCCCACCATGGTAGATTCGAGGAAGTCCCCCAAGCCCACCGCAAGACTCGGGTTCGAGGAGATCACC
CGCCCCACCCTGCGATCTAGAGACTAG
Protein sequenceShow/hide protein sequence
MDTNKPTNEGMPTRREEEERCGPLDFDQRDGVNVAPSVYSYLRSIDSFVSKLEGRVSKVDEDLSYVKVQLTTITSLLQSLIKDPTMVDSRKSPKPTARLGFEEIT
RPTLRSRD