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Lsi03G006850 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G006850
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNAC domain-containing protein
Genome locationchr03:8730614..8732977
RNA-Seq ExpressionLsi03G006850
SyntenyLsi03G006850
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053777.1 NAC domain-containing protein 100-like protein [Cucumis melo var. makuwa]3.1e-2198Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        MELPPGFRFHPTDEELITHYLSPK+LSSTFSSPAIAEVDLNKCEPWDLPG
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

XP_004136698.1 NAC domain-containing protein 100 isoform X1 [Cucumis sativus]3.1e-2198Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        MELPPGFRFHPTDEELITHYLSPK+LSSTFSSPAIAEVDLNKCEPWDLPG
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

XP_011652233.1 NAC domain-containing protein 100 isoform X2 [Cucumis sativus]3.1e-2198Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        MELPPGFRFHPTDEELITHYLSPK+LSSTFSSPAIAEVDLNKCEPWDLPG
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

XP_038905380.1 NAC domain-containing protein 100-like isoform X1 [Benincasa hispida]3.1e-2198Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        MELPPGFRFHPTDEELITHYLSPK+LSSTFSSPAIAEVDLNKCEPWDLPG
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

XP_038905381.1 NAC domain-containing protein 100-like isoform X2 [Benincasa hispida]3.1e-2198Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        MELPPGFRFHPTDEELITHYLSPK+LSSTFSSPAIAEVDLNKCEPWDLPG
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

TrEMBL top hitse value%identityAlignment
A0A0A0LF85 NAC domain-containing protein1.5e-2198Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        MELPPGFRFHPTDEELITHYLSPK+LSSTFSSPAIAEVDLNKCEPWDLPG
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

A0A1S3B7F7 NAC domain-containing protein 100-like1.5e-2198Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        MELPPGFRFHPTDEELITHYLSPK+LSSTFSSPAIAEVDLNKCEPWDLPG
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

A0A5A7UGY2 NAC domain-containing protein 100-like protein1.5e-2198Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        MELPPGFRFHPTDEELITHYLSPK+LSSTFSSPAIAEVDLNKCEPWDLPG
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

A0A6J1F4T1 NAC domain-containing protein 100-like2.8e-2092Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        MELPPGFRFHPTDEELITHYLSPK+LS++FSSPAI EVDLNKCEPWDLPG
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

A0A6J1J8P9 NAC domain-containing protein 100-like2.8e-2092Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        MELPPGFRFHPTDEELITHYLSPK+LS++FSSPAI EVDLNKCEPWDLPG
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

SwissProt top hitse value%identityAlignment
O04017 Protein CUP-SHAPED COTYLEDON 27.4e-1883.33Show/hide
Query:  LPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        LPPGFRFHPTDEELITHYL  K+L   FSS AIAEVDLNKCEPW LPG
Subjt:  LPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

Q9FKA0 NAC domain-containing protein 922.8e-1775.51Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP
        ++LPPGFRFHPTDEELITHYL PK+ ++ FS+ AI EVDLNK EPWDLP
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP

Q9FLJ2 NAC domain-containing protein 1006.2e-1775.51Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP
        M+LPPGFRFHPTDEELITHYL  K+L ++FS+ AI EVDLNK EPW+LP
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP

Q9FLR3 NAC domain-containing protein 792.4e-1675.51Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP
        M+LPPGFRFHPTDEELITHYL  K+L   FS+ AI EVDLNK EPW+LP
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP

Q9LJW3 NAC domain-containing protein 591.3e-1772.73Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPGWSGGL
        ++LPPGFRFHPTDEELITHYL PK+++S FS+ AI EVDLNK EPWDLP W   L
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPGWSGGL

Arabidopsis top hitse value%identityAlignment
AT3G29035.1 NAC domain containing protein 38.9e-1972.73Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPGWSGGL
        ++LPPGFRFHPTDEELITHYL PK+++S FS+ AI EVDLNK EPWDLP W   L
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPGWSGGL

AT5G07680.1 NAC domain containing protein 801.7e-1775.51Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP
        M+LPPGFRFHPTDEELITHYL  K+L   FS+ AI EVDLNK EPW+LP
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP

AT5G39610.1 NAC domain containing protein 62.0e-1875.51Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP
        ++LPPGFRFHPTDEELITHYL PK+ ++ FS+ AI EVDLNK EPWDLP
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP

AT5G53950.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein5.2e-1983.33Show/hide
Query:  LPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG
        LPPGFRFHPTDEELITHYL  K+L   FSS AIAEVDLNKCEPW LPG
Subjt:  LPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPG

AT5G61430.1 NAC domain containing protein 1004.4e-1875.51Show/hide
Query:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP
        M+LPPGFRFHPTDEELITHYL  K+L ++FS+ AI EVDLNK EPW+LP
Subjt:  MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTGCCACCTGGATTCCGATTCCATCCGACGGACGAAGAGCTCATCACACACTACCTTTCCCCCAAAATCCTTTCCTCCACCTTCTCTTCTCCGGCGATC
GCGGAAGTCGATCTTAACAAGTGCGAGCCATGGGATTTGCCTGGGTGGTCGGGTGGGTTGTCCCTTGAGATTAGTCGAGGTGCGCTCTCTCACCATCACCGTCAT
CTCCTTGTTTCCTCTCGAGATTTCTTGCTCAGTCATAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACTGCCACCTGGATTCCGATTCCATCCGACGGACGAAGAGCTCATCACACACTACCTTTCCCCCAAAATCCTTTCCTCCACCTTCTCTTCTCCGGCGATC
GCGGAAGTCGATCTTAACAAGTGCGAGCCATGGGATTTGCCTGGGTGGTCGGGTGGGTTGTCCCTTGAGATTAGTCGAGGTGCGCTCTCTCACCATCACCGTCAT
CTCCTTGTTTCCTCTCGAGATTTCTTGCTCAGTCATAGATAG
Protein sequenceShow/hide protein sequence
MELPPGFRFHPTDEELITHYLSPKILSSTFSSPAIAEVDLNKCEPWDLPGWSGGLSLEISRGALSHHHRHLLVSSRDFLLSHR