CuGenDBv2

Gene ID	Lsi03G007100
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	glutelin type-B 5-like
Genome location	chr03:9357101..9357614
RNA-Seq Expression	Lsi03G007100
Synteny	Lsi03G007100
Gene Ontology terms	NA
InterPro domains	IPR011051 - RmlC-like cupin domain superfamily IPR014710 - RmlC-like jelly roll fold

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6592225.1 Glutelin type-D 1, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-56

73.81

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Query:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------
        M LNCEEAPLDVDVKNGGRVVVLN KNL LVGEVGLGADLVRLDGSAMCSPGFSCDSALQV +I R     +    D +   E                 
Subjt:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------

Query:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
           GDPEGMEWFSIITTPNPVFTHLAGSI VWK+LSPEVIQAAFNVDADLVKNFSSKRASDAIFFPP+
Subjt:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

XP_022932542.1 glutelin type-D 1-like [Cucurbita moschata]

1.8e-56

73.81

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Query:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------
        M LNCEEAPLDVDVKNGGRVVVLN KNL LVGEVGLGADLVRLDGSAMCSPGFSCDSALQV +I R     +    D +   E                 
Subjt:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------

Query:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
           GDPEGMEWFSIITTPNPVFTHLAGSI VWK+LSPEVIQAAFNVDADLVKNFSSKRASDAIFFPP+
Subjt:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

XP_022976927.1 glutelin type-D 1-like [Cucurbita maxima]

5.2e-56

73.21

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Query:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------
        M LNCEEAPLDVDVKNGGRVVVLN KNL LVGEVGLGADLVRLDGSAMCSPGFSCDSALQV +I R     +    D +   E                 
Subjt:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------

Query:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
           GDPEGMEWFSII+TPNPVFTHLAGSI VWK+LSPEVIQAAFNVDADLVKNFSSKRASDAIFFPP+
Subjt:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

XP_023535755.1 glutelin type-D 1-like [Cucurbita pepo subsp. pepo]

5.2e-56

73.21

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Query:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------
        M LNCEEAPLDVDVKNGGRVVVLN KNL LVGEVGLGADLVRLDGSAMCSPGFSCDSALQV +I R     +    D +   E                 
Subjt:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------

Query:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
           GDPEGMEWFSII+TPNPVFTHLAGSI VWK+LSPEVIQAAFNVDADLVKNFSSKRASDAIFFPP+
Subjt:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

XP_038897477.1 glutelin type-D 1-like [Benincasa hispida]

8.8e-56

72.62

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Query:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------
        M LNCEEAPLDVDVKNGGRVVVLN KNL LVGEVGLGADLVRLDGSAMCSPGFSCDSA QV +I +     +    D +   E                 
Subjt:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------

Query:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
           GDPEGMEWFSII+TPNPVFTHLAGSI VWK+LSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
Subjt:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K666 Uncharacterized protein

3.6e-55

71.43

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Query:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------
        M LNCEEAPLDVDVKNGGRVVVLN KNL LVGEVGLGADLVRLDGSAMCSPGFSCDSALQV +I +     +    D +   E                 
Subjt:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------

Query:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
           GDPEGMEWFSII+TPNPVFTHLAGSI VWKALSPEVI+AAFNV+ADLVKNFSSKR+SDAIFFPP+
Subjt:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

A0A1S3CG59 glutelin type-B 5-like

1.6e-55

72.02

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Query:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------
        M LNCEEAPLDVDVKNGGRVVVLN KNL LVGEVGLGADLVRLDGSAMCSPGFSCDSALQV +I +     +    D +   E                 
Subjt:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------

Query:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
           GDPEGMEWFSII+TPNPVFTHLAGSI VWKALSPEVIQAAFNV+ADLVKNFSSKR+SDAIFFPP+
Subjt:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

A0A5A7UAB0 Glutelin type-B 5-like

1.6e-55

72.02

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Query:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------
        M LNCEEAPLDVDVKNGGRVVVLN KNL LVGEVGLGADLVRLDGSAMCSPGFSCDSALQV +I +     +    D +   E                 
Subjt:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------

Query:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
           GDPEGMEWFSII+TPNPVFTHLAGSI VWKALSPEVIQAAFNV+ADLVKNFSSKR+SDAIFFPP+
Subjt:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

A0A6J1EX25 glutelin type-D 1-like

8.6e-57

73.81

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Query:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------
        M LNCEEAPLDVDVKNGGRVVVLN KNL LVGEVGLGADLVRLDGSAMCSPGFSCDSALQV +I R     +    D +   E                 
Subjt:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------

Query:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
           GDPEGMEWFSIITTPNPVFTHLAGSI VWK+LSPEVIQAAFNVDADLVKNFSSKRASDAIFFPP+
Subjt:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

A0A6J1IH21 glutelin type-D 1-like

2.5e-56

73.21

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Query:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------
        M LNCEEAPLDVDVKNGGRVVVLN KNL LVGEVGLGADLVRLDGSAMCSPGFSCDSALQV +I R     +    D +   E                 
Subjt:  MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHR---ERKWKSRDCRNRWEE----------------

Query:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
           GDPEGMEWFSII+TPNPVFTHLAGSI VWK+LSPEVIQAAFNVDADLVKNFSSKRASDAIFFPP+
Subjt:  ---GDPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

SwissProt top hits

e value

%identity

Alignment

P12615 12S seed storage globulin 1

8.1e-04

23.46

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Query:  EAPLDVDVKN--GGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCD-----------SALQVGHIHRERKWKSRDCRNR----------WEEGD
        E P   D  N   GR+  LN KN   +  V + A  V L  +A+ SP ++ +           + +QV + H +  +     R +           ++ +
Subjt:  EAPLDVDVKN--GGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCD-----------SALQVGHIHRERKWKSRDCRNR----------WEEGD

Query:  PEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPP
         EG ++ S  TTPN + +++AG   + +AL  +V+  A+ +     +N  + R  +   F P
Subjt:  PEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPP

Arabidopsis top hits

e value

%identity

Alignment

AT1G07750.1 RmlC-like cupins superfamily protein

2.2e-44

56.02

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Query:  LNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQV-------GHIHRERKWKSRDCRNRWEEG-------------
        LNC EAPLDVD+K+GGRVVVLN KNL LVGEVG GADLVR+D  +MCSPGFSCDSALQV       G +        R      + G             
Subjt:  LNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQV-------GHIHRERKWKSRDCRNRWEEG-------------

Query:  --DPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
          D +GM WFSI+TTP+P+FTHLAG+  VWK+LSPEV+QAAF V  ++ K+F S R S AIFFPP+
Subjt:  --DPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

AT2G28680.1 RmlC-like cupins superfamily protein

5.2e-46

57.83

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Query:  LNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQV-------GHIHRERKWKSRDCRNRWEEG-------------
        LNC EAPLDVD+K+GGRVVVLN KNL LVGEVG GADLVR+DG +MCSPGFSCDSALQV       G +        R      + G             
Subjt:  LNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQV-------GHIHRERKWKSRDCRNRWEEG-------------

Query:  --DPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN
          D +G+ WFSI+TTP+P+FTHLAG   VWKALSPEV+QAAF VD ++ K F SKR SDAIFF P+
Subjt:  --DPEGMEWFSIITTPNPVFTHLAGSIDVWKALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

Sequences

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CDS sequence

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ATGACGTTGAACTGTGAGGAGGCGCCGCTAGATGTGGACGTGAAGAATGGAGGACGAGTTGTGGTTTTGAACATGAAGAATCTCTCTCTGGTAGGAGAGGTAGGATTGGG
AGCCGATCTGGTCCGATTGGATGGAAGTGCGATGTGTTCGCCTGGATTCTCGTGCGATTCAGCATTGCAGGTAGGTCACATACATCGTGAAAGGAAGTGGAAGAGTAGAG
ATTGTAGGAATAGATGGGAAGAAGGAGATCCTGAAGGAATGGAGTGGTTCTCTATTATCACCACTCCTAATCCTGTTTTCACTCATTTGGCTGGCAGCATCGATGTCTGG
AAAGCTCTGTCGCCTGAAGTTATTCAAGCAGCCTTCAATGTTGATGCTGATTTGGTCAAGAACTTCTCTTCAAAGAGGGCTTCTGATGCCATCTTCTTCCCTCCAAATTA
A

mRNA sequence

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Protein sequence

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MTLNCEEAPLDVDVKNGGRVVVLNMKNLSLVGEVGLGADLVRLDGSAMCSPGFSCDSALQVGHIHRERKWKSRDCRNRWEEGDPEGMEWFSIITTPNPVFTHLAGSIDVW
KALSPEVIQAAFNVDADLVKNFSSKRASDAIFFPPN

Lsi03G007100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome