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Lsi03G007110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G007110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransposase
Genome locationchr03:9374919..9375356
RNA-Seq ExpressionLsi03G007110
SyntenyLsi03G007110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032239.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]3.4e-0452.31Show/hide
Query:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM
        DEPQLL  P ++YS      WEEFVRSRL   FQ            NKYNH +S K YANL EEM
Subjt:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM

KAA0066650.1 transposase [Cucumis melo var. makuwa]4.0e-0552.24Show/hide
Query:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEMYL
        DEPQLL  P ++YS      WEEFVRSRL   FQ            NKYNH +S K YANL EEMY+
Subjt:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEMYL

KAE8648270.1 hypothetical protein Csa_017799, partial [Cucumis sativus]1.2e-0450.77Show/hide
Query:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM
        DEPQLL  P ++YS      W EFVRSRLC  FQ            NKYNH +S K Y NL+EEM
Subjt:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM

XP_031741710.1 uncharacterized protein LOC116403905 [Cucumis sativus]3.1e-0552.31Show/hide
Query:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM
        DEPQLL  P ++YS      W EFVRSRLC  FQ            NKYNH +S K YANL+EEM
Subjt:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM

XP_031742069.1 uncharacterized protein LOC116404040 [Cucumis sativus]8.7e-0847.19Show/hide
Query:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEMYLQMKVIS--IELICGRRLELIRK
        DEPQLL  P ++YS      W EFVRSRLC  FQ            NKYNH +S K Y NL+EEM  ++++    IE  CG+RLEL +K
Subjt:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEMYLQMKVIS--IELICGRRLELIRK

TrEMBL top hitse value%identityAlignment
A0A5A7VHJ5 Transposase2.0e-0552.24Show/hide
Query:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEMYL
        DEPQLL  P ++YS      WEEFVRSRL   FQ            NKYNH +S K YANL EEMY+
Subjt:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEMYL

A0A5D3C8G6 Putative serine/threonine-protein kinase nek21.7e-0452.31Show/hide
Query:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM
        DEPQLL  P ++YS      WEEFVRSRL   FQ            NKYNH +S K YANL EEM
Subjt:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM

A0A5D3C8G8 Putative serine/threonine-protein kinase nek21.7e-0452.31Show/hide
Query:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM
        DEPQLL  P ++YS      WEEFVRSRL   FQ            NKYNH +S K YANL EEM
Subjt:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM

A0A5D3DME5 Putative serine/threonine-protein kinase nek21.7e-0452.31Show/hide
Query:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM
        DEPQLL  P ++YS      WEEFVRSRL   FQ            NKYNH +S K YANL EEM
Subjt:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM

A0A5D3E302 Putative serine/threonine-protein kinase nek21.7e-0452.31Show/hide
Query:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM
        DEPQLL  P ++YS      WEEFVRSRL   FQ            NKYNH +S K YANL EEM
Subjt:  DEPQLLINPSKEYS------WEEFVRSRLCVEFQ------------NKYNHHMSMKSYANLVEEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGAACCTCAGCTTCTAATCAATCCATCAAAAGAGTATTCATGGGAAGAGTTTGTAAGATCTAGATTGTGTGTAGAGTTTCAGAATAAGTATAATCATCACATGTCAAT
GAAAAGTTATGCTAACCTTGTGGAGGAAATGTATCTTCAAATGAAAGTGATTTCGATCGAGCTAATTTGTGGAAGAAGGCTCGAGTTAATAAGGAAGGAGAATACGACAA
TGAAAATGTTCGAGAAGTCATCAATTGAATAG
mRNA sequenceShow/hide mRNA sequence
GATGAACCTCAGCTTCTAATCAATCCATCAAAAGAGTATTCATGGGAAGAGTTTGTAAGATCTAGATTGTGTGTAGAGTTTCAGAATAAGTATAATCATCACATGTCAAT
GAAAAGTTATGCTAACCTTGTGGAGGAAATGTATCTTCAAATGAAAGTGATTTCGATCGAGCTAATTTGTGGAAGAAGGCTCGAGTTAATAAGGAAGGAGAATACGACAA
TGAAAATGTTCGAGAAGTCATCAATTGAATAG
Protein sequenceShow/hide protein sequence
DEPQLLINPSKEYSWEEFVRSRLCVEFQNKYNHHMSMKSYANLVEEMYLQMKVISIELICGRRLELIRKENTTMKMFEKSSIE