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Lsi03G007130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G007130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMADS-box protein JOINTLESS-like isoform X2
Genome locationchr03:9526579..9540000
RNA-Seq ExpressionLsi03G007130
SyntenyLsi03G007130
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455140.1 PREDICTED: MADS-box protein SVP-like isoform X1 [Cucumis melo]1.6e-1280.95Show/hide
Query:  QRVDLLIEENQRLKQLEVEKMTEQ--MQNIQGNSSESIVNNSTSS-NPSQDYDSSDTSLKLGI
        ++VDLLIEEN+RL +LEVEKM EQ  MQNIQGNSSES+ NNSTSS NPSQDYDSSDTSLKLG+
Subjt:  QRVDLLIEENQRLKQLEVEKMTEQ--MQNIQGNSSESIVNNSTSS-NPSQDYDSSDTSLKLGI

XP_022141961.1 MADS-box protein JOINTLESS-like isoform X1 [Momordica charantia]1.3e-1478.12Show/hide
Query:  QRVDLLIEENQRLKQL-EVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGITGM
        ++VD+L+EENQRL QL EVEKMT+QMQN+QGNSSESIVNN +SSNPSQDYDSSDTSLKLG+  +
Subjt:  QRVDLLIEENQRLKQL-EVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGITGM

XP_022141962.1 MADS-box protein JOINTLESS-like isoform X2 [Momordica charantia]5.4e-1679.37Show/hide
Query:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGITGM
        ++VD+L+EENQRL QLEVEKMT+QMQN+QGNSSESIVNN +SSNPSQDYDSSDTSLKLG+  +
Subjt:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGITGM

XP_038886862.1 MADS-box protein SVP-like isoform X1 [Benincasa hispida]1.8e-1688.33Show/hide
Query:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGI
        ++VDLLIEEN+RL QLE+E MTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLG+
Subjt:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGI

XP_038886863.1 MADS-box protein SVP-like isoform X2 [Benincasa hispida]4.1e-1689.83Show/hide
Query:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLG
        ++VDLLIEEN+RL QLE+E MTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLG
Subjt:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLG

TrEMBL top hitse value%identityAlignment
A0A1S3C1G2 MADS-box protein SVP-like isoform X17.8e-1380.95Show/hide
Query:  QRVDLLIEENQRLKQLEVEKMTEQ--MQNIQGNSSESIVNNSTSS-NPSQDYDSSDTSLKLGI
        ++VDLLIEEN+RL +LEVEKM EQ  MQNIQGNSSES+ NNSTSS NPSQDYDSSDTSLKLG+
Subjt:  QRVDLLIEENQRLKQLEVEKMTEQ--MQNIQGNSSESIVNNSTSS-NPSQDYDSSDTSLKLGI

A0A6J1CKS2 MADS-box protein JOINTLESS-like isoform X16.4e-1578.12Show/hide
Query:  QRVDLLIEENQRLKQL-EVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGITGM
        ++VD+L+EENQRL QL EVEKMT+QMQN+QGNSSESIVNN +SSNPSQDYDSSDTSLKLG+  +
Subjt:  QRVDLLIEENQRLKQL-EVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGITGM

A0A6J1CLA0 MADS-box protein JOINTLESS-like isoform X22.6e-1679.37Show/hide
Query:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGITGM
        ++VD+L+EENQRL QLEVEKMT+QMQN+QGNSSESIVNN +SSNPSQDYDSSDTSLKLG+  +
Subjt:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGITGM

A0A6J1GJY0 MADS-box protein JOINTLESS-like isoform X18.1e-1072.13Show/hide
Query:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGIT
        ++VDLLIEENQRL QLEVEKM  Q  N+QG+SSESIVNN      SQDYDSSDTSLKLG++
Subjt:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGIT

A0A6J1GL54 MADS-box protein JOINTLESS-like isoform X31.1e-0973.33Show/hide
Query:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGI
        ++VDLLIEENQRL QLEVEKM  Q  N+QG+SSESIVNN      SQDYDSSDTSLKLG+
Subjt:  QRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQDYDSSDTSLKLGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGGTGCGGCGGACTGTGCTTCGGGGGCCTGACATGAACCTCGTCGGGCGCAGGACGCAGGCTTGCCGTGTGGCCTCTGCTCCAAGGCATGCGCCTGAGTTTCA
AGGGATGGTCTATAAAATGATGGATGCAGCCCCACTAAGTATTTTTCTAAAGAAATTGCATTTCCCTGTTAAGACTTTGCAAAGGGTTGATTTGCTGATAGAAGAAAATC
AGAGATTGAAACAGCTTGAGGTGGAGAAAATGACAGAGCAAATGCAGAACATACAAGGAAACTCTTCTGAGTCTATAGTGAATAATTCCACTTCATCAAACCCTTCTCAA
GATTATGACAGCTCTGACACTTCTCTCAAATTGGGTATAACAGGAATGTGTATGAGATTTTTTTCACAACAAAAGCCTCAATCCAACATATTTTTATCGATCAAATATCG
TACTCAAGGTTTCGCTGTAGTTGTGTGGGGTGGGTTAAAAGAAGAGAAAGACAAATTCTTTGGAAAGGTAGGCAGAACTGGCTTTGGGAGGGGTGACAATTCAGGTAACT
TAGGGAGTTCTGGTTTAGGCATATTTGAGAATTCTGGTAATTTAGGAACCTCCAGCTTTGGCACGTTCGGTAATTCAGGTAATTTTGGGAGCTCAGGTTTTGGTAGTTCT
GAAACTTCAGACAGTTTGGGAAGATCAAACTTAGGCAAGCTTGGAACTTCAGGAAATTTGGAGAGGTCAAGCTTAGGCACTTTCGGTAATTCAGGAAACTTTGGGAGTTC
AGGTTTTGGCAATTCAGGCACTTTAGGCTTTTCCAAAGGTAACTCAACCTTTGGAAGTGGAGGAAGCTCGGGCTTCGGCAAAGTTGGTATTTCCGGCTTTGGAAGCTCTT
CGGGCACCTTAGGTAATGGCGTCTCCAGGAGATGCCTTGCGCTTACTGTCGTGATTAAGAAATCAAAGTTCATCAACATAAAAGCACCAAGTATCACGGGAAATGCGAAG
CTTGATAAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATGGTGCGGCGGACTGTGCTTCGGGGGCCTGACATGAACCTCGTCGGGCGCAGGACGCAGGCTTGCCGTGTGGCCTCTGCTCCAAGGCATGCGCCTGAGTTTCA
AGGGATGGTCTATAAAATGATGGATGCAGCCCCACTAAGTATTTTTCTAAAGAAATTGCATTTCCCTGTTAAGACTTTGCAAAGGGTTGATTTGCTGATAGAAGAAAATC
AGAGATTGAAACAGCTTGAGGTGGAGAAAATGACAGAGCAAATGCAGAACATACAAGGAAACTCTTCTGAGTCTATAGTGAATAATTCCACTTCATCAAACCCTTCTCAA
GATTATGACAGCTCTGACACTTCTCTCAAATTGGGTATAACAGGAATGTGTATGAGATTTTTTTCACAACAAAAGCCTCAATCCAACATATTTTTATCGATCAAATATCG
TACTCAAGGTTTCGCTGTAGTTGTGTGGGGTGGGTTAAAAGAAGAGAAAGACAAATTCTTTGGAAAGGTAGGCAGAACTGGCTTTGGGAGGGGTGACAATTCAGGTAACT
TAGGGAGTTCTGGTTTAGGCATATTTGAGAATTCTGGTAATTTAGGAACCTCCAGCTTTGGCACGTTCGGTAATTCAGGTAATTTTGGGAGCTCAGGTTTTGGTAGTTCT
GAAACTTCAGACAGTTTGGGAAGATCAAACTTAGGCAAGCTTGGAACTTCAGGAAATTTGGAGAGGTCAAGCTTAGGCACTTTCGGTAATTCAGGAAACTTTGGGAGTTC
AGGTTTTGGCAATTCAGGCACTTTAGGCTTTTCCAAAGGTAACTCAACCTTTGGAAGTGGAGGAAGCTCGGGCTTCGGCAAAGTTGGTATTTCCGGCTTTGGAAGCTCTT
CGGGCACCTTAGGTAATGGCGTCTCCAGGAGATGCCTTGCGCTTACTGTCGTGATTAAGAAATCAAAGTTCATCAACATAAAAGCACCAAGTATCACGGGAAATGCGAAG
CTTGATAAGCAATGA
Protein sequenceShow/hide protein sequence
MSMVRRTVLRGPDMNLVGRRTQACRVASAPRHAPEFQGMVYKMMDAAPLSIFLKKLHFPVKTLQRVDLLIEENQRLKQLEVEKMTEQMQNIQGNSSESIVNNSTSSNPSQ
DYDSSDTSLKLGITGMCMRFFSQQKPQSNIFLSIKYRTQGFAVVVWGGLKEEKDKFFGKVGRTGFGRGDNSGNLGSSGLGIFENSGNLGTSSFGTFGNSGNFGSSGFGSS
ETSDSLGRSNLGKLGTSGNLERSSLGTFGNSGNFGSSGFGNSGTLGFSKGNSTFGSGGSSGFGKVGISGFGSSSGTLGNGVSRRCLALTVVIKKSKFINIKAPSITGNAK
LDKQ