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Lsi03G007230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G007230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:9670444..9671762
RNA-Seq ExpressionLsi03G007230
SyntenyLsi03G007230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645820.1 hypothetical protein Csa_017234 [Cucumis sativus]1.4e-1759.3Show/hide
Query:  MSCGVIGNVNHETK-DGKKGNVWITWTPIPNVEDLLVKIIAEFAVAEYNKKYKKQWKCKRIQQAWYSVIIEENQTQYRFHLEQDEL
        MSCG +    HETK D KKG V ITWTPIPN+E+  V+ + +F V EYNK YKK WK K++QQ WYS +I+  QTQYRF LEQD++
Subjt:  MSCGVIGNVNHETK-DGKKGNVWITWTPIPNVEDLLVKIIAEFAVAEYNKKYKKQWKCKRIQQAWYSVIIEENQTQYRFHLEQDEL
KAG6571860.1 hypothetical protein SDJN03_28588, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2164.63Show/hide
Query:  GVIGNVNHETKDGKKGNVWITWTPIPNVEDLLVKIIAEFAVAEYNKKYKKQWKCKRIQQAWYSVIIEENQTQYRFHLEQDEL
        G   ++NH+  D KKG VWITWT I NVE+  V+ IA+FAV EYNKKYKKQWKCKRIQQ WYSV+  +++TQYRF LEQD++
Subjt:  GVIGNVNHETKDGKKGNVWITWTPIPNVEDLLVKIIAEFAVAEYNKKYKKQWKCKRIQQAWYSVIIEENQTQYRFHLEQDEL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTGGAGTTATTGGCAATGTGAACCATGAGACAAAGGATGGAAAGAAGGGTAATGTGTGGATCACATGGACACCAATTCCCAACGTTGAAGATCTGCTTGTGAA
AATCATTGCAGAGTTCGCAGTGGCAGAATACAATAAGAAATACAAAAAGCAATGGAAATGTAAGCGCATTCAACAAGCTTGGTACTCAGTGATAATAGAGGAGAATCAAA
CTCAATATCGTTTCCATTTAGAGCAAGATGAACTGGAGAAGGTGAAAATGAAGGTGAAGGTGGAGCCGGTCGGAGGAGGTGGTGTGGAACTCGTGGAGCCGGTCGCCAAT
AATCTTCACGACTCAAGGTTGAAGGTGAAACTAGCGACCGACGTGCGTGCTGAGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGTGGAGTTATTGGCAATGTGAACCATGAGACAAAGGATGGAAAGAAGGGTAATGTGTGGATCACATGGACACCAATTCCCAACGTTGAAGATCTGCTTGTGAA
AATCATTGCAGAGTTCGCAGTGGCAGAATACAATAAGAAATACAAAAAGCAATGGAAATGTAAGCGCATTCAACAAGCTTGGTACTCAGTGATAATAGAGGAGAATCAAA
CTCAATATCGTTTCCATTTAGAGCAAGATGAACTGGAGAAGGTGAAAATGAAGGTGAAGGTGGAGCCGGTCGGAGGAGGTGGTGTGGAACTCGTGGAGCCGGTCGCCAAT
AATCTTCACGACTCAAGGTTGAAGGTGAAACTAGCGACCGACGTGCGTGCTGAGGGTTGA
Protein sequenceShow/hide protein sequence
MSCGVIGNVNHETKDGKKGNVWITWTPIPNVEDLLVKIIAEFAVAEYNKKYKKQWKCKRIQQAWYSVIIEENQTQYRFHLEQDELEKVKMKVKVEPVGGGGVELVEPVAN
NLHDSRLKVKLATDVRAEG