; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G007310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G007310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:9855737..9861096
RNA-Seq ExpressionLsi03G007310
SyntenyLsi03G007310
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455165.1 PREDICTED: uncharacterized protein LOC103495399 [Cucumis melo]2.8e-6065.09Show/hide
Query:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLI---CRRWKSELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQ-----PLTSTFFFFPGWA
        MSSKFGH WR+ LLQLF K D S+     +    RR    L  +SSVA+V      FGS TY+SSL RSY  R R    K +     P +STFFFFP WA
Subjt:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLI---CRRWKSELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQ-----PLTSTFFFFPGWA

Query:  KWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDK
        KWIFG+LLSLLVP+WN LQ +EDEAE ++EE ENVAEVVEKVAELTEKVS EI +KLPEKSKLKEAA +VENYSKEIAHDAHLTQDILHKVEEWKQK+DK
Subjt:  KWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDK

Query:  SETTVNEQIKKK
        S+  +NE  K++
Subjt:  SETTVNEQIKKK

XP_011658811.1 uncharacterized protein LOC105436091 [Cucumis sativus]3.7e-6066.21Show/hide
Query:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICRRWKSELPQA------SSVAIVPVRLSLFGSATYMSSLFRSYCPR-------IRHNQDKDQPLTSTFFF
        MSSKFGH WR+ LLQLF K D S   S    RR  SE  QA      SSVA+VP     FGS TYMSSL RSYC R          ++D+D+P  STFFF
Subjt:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICRRWKSELPQA------SSVAIVPVRLSLFGSATYMSSLFRSYCPR-------IRHNQDKDQPLTSTFFF

Query:  F--PGWAKWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEE
        F  P WAKWIFG+LLSLLVP+WNKLQ +EDEAE +IEEAENVAEVVEKVAELTEKVS +I +KLPEKSKLKEAA +VE+YSKEIAHDAHLTQDILHKVEE
Subjt:  F--PGWAKWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEE

Query:  WKQKLDKSETTVNEQIKKK
        WK K+DKS+   NE  K++
Subjt:  WKQKLDKSETTVNEQIKKK

XP_022141966.1 uncharacterized protein LOC111012212 [Momordica charantia]3.0e-5461.47Show/hide
Query:  MSSKFGHFWRSW-------LLQLFPKIDTSTPGSGLICRRWKSELPQASSVAIVPVRLSLFGSATY-MSSLFRSY--CPRIRHNQDKDQPLTSTFFFFPG
        MSSK GHFW S        LLQLF K +    G G      +S  P  SSVA++P          Y M  LF SY     ++ N++KDQ  T  +FFFPG
Subjt:  MSSKFGHFWRSW-------LLQLFPKIDTSTPGSGLICRRWKSELPQASSVAIVPVRLSLFGSATY-MSSLFRSY--CPRIRHNQDKDQPLTSTFFFFPG

Query:  WAKWIFGSLLSLLVPSW----NKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEW
        W KWIFGSLLSLL+P+W    NKLQTLE EAE +IEEAE+VAEVVEK AE+ EK SAEI  KLPEKSKLKEAA +VE YSK+IAHDAHLTQDILHKVEEW
Subjt:  WAKWIFGSLLSLLVPSW----NKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEW

Query:  KQKLDKSETTVNEQIKKK
        KQKLDKSET +NEQI+KK
Subjt:  KQKLDKSETTVNEQIKKK

XP_022972002.1 uncharacterized protein LOC111470651 [Cucurbita maxima]6.8e-5463.98Show/hide
Query:  MSSKFGHFW-------RSWLLQLFPKIDTSTPGSGLICRRWK-SELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQPLTSTFFFFPGWA
        MSS  GHFW       RS LLQL  KI+TS P  G  CRR   SE PQ+SSVA+VP     FG    +SSL RSYCPR                     A
Subjt:  MSSKFGHFW-------RSWLLQLFPKIDTSTPGSGLICRRWK-SELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQPLTSTFFFFPGWA

Query:  KWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDK
        KWIFGSLLSL VPSWNK Q LEDEAE  IEEAE+VAEVVEKVAELTEKVSAEIG+KLPEKS++K+AA  VE YSKEIAHDA L Q ILHKVEEWKQKLDK
Subjt:  KWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDK

Query:  SETTVNEQIKK
        SE  +NEQ+KK
Subjt:  SETTVNEQIKK

XP_038888803.1 uncharacterized protein LOC120078589 [Benincasa hispida]2.0e-7776.96Show/hide
Query:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICRRWKSELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQPLTSTFFFFPGWAKWIFGSLL
        MSSKFGHFWR+ L QLF K DTS P  G  CRR  SE PQ SS+ +  V     GS TY SSL R YC R+RH+Q+KDQP TSTFFFFPGWAKW+FGSLL
Subjt:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICRRWKSELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQPLTSTFFFFPGWAKWIFGSLL

Query:  SLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDKSETTVNEQ
        SLLVPSWN+L+TLEDEAE +IEEAENVA+VVE+VAELTEKVSAEI +KLPEKSKLKEAA +VENYSKE+AHDAHLTQDILHKVEEWKQKLD SET VNEQ
Subjt:  SLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDKSETTVNEQ

Query:  IKKK
        IKKK
Subjt:  IKKK

TrEMBL top hitse value%identityAlignment
A0A0A0K622 Uncharacterized protein1.8e-6066.21Show/hide
Query:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICRRWKSELPQA------SSVAIVPVRLSLFGSATYMSSLFRSYCPR-------IRHNQDKDQPLTSTFFF
        MSSKFGH WR+ LLQLF K D S   S    RR  SE  QA      SSVA+VP     FGS TYMSSL RSYC R          ++D+D+P  STFFF
Subjt:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICRRWKSELPQA------SSVAIVPVRLSLFGSATYMSSLFRSYCPR-------IRHNQDKDQPLTSTFFF

Query:  F--PGWAKWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEE
        F  P WAKWIFG+LLSLLVP+WNKLQ +EDEAE +IEEAENVAEVVEKVAELTEKVS +I +KLPEKSKLKEAA +VE+YSKEIAHDAHLTQDILHKVEE
Subjt:  F--PGWAKWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEE

Query:  WKQKLDKSETTVNEQIKKK
        WK K+DKS+   NE  K++
Subjt:  WKQKLDKSETTVNEQIKKK

A0A1S3C099 uncharacterized protein LOC1034953991.4e-6065.09Show/hide
Query:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLI---CRRWKSELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQ-----PLTSTFFFFPGWA
        MSSKFGH WR+ LLQLF K D S+     +    RR    L  +SSVA+V      FGS TY+SSL RSY  R R    K +     P +STFFFFP WA
Subjt:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLI---CRRWKSELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQ-----PLTSTFFFFPGWA

Query:  KWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDK
        KWIFG+LLSLLVP+WN LQ +EDEAE ++EE ENVAEVVEKVAELTEKVS EI +KLPEKSKLKEAA +VENYSKEIAHDAHLTQDILHKVEEWKQK+DK
Subjt:  KWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDK

Query:  SETTVNEQIKKK
        S+  +NE  K++
Subjt:  SETTVNEQIKKK

A0A5A7SPP8 Uncharacterized protein7.3e-5465.97Show/hide
Query:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLI---CRRWKSELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQ-----PLTSTFFFFPGWA
        MSSKFGH WR+ LLQLF K D S+     +    RR    L  +SSVA+V      FGS TY+SSL RSY  R R    K +     P +STFFFFP WA
Subjt:  MSSKFGHFWRSWLLQLFPKIDTSTPGSGLI---CRRWKSELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQ-----PLTSTFFFFPGWA

Query:  KWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKV
        KWIFG+LLSLLVP+WN LQ +EDEAE ++EE ENVAEVVEKVAELTEKVS EI +KLPEKSKLKEAA +VENYSKEIAHDAHLTQDILHKV
Subjt:  KWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKV

A0A6J1CKS7 uncharacterized protein LOC1110122121.5e-5461.47Show/hide
Query:  MSSKFGHFWRSW-------LLQLFPKIDTSTPGSGLICRRWKSELPQASSVAIVPVRLSLFGSATY-MSSLFRSY--CPRIRHNQDKDQPLTSTFFFFPG
        MSSK GHFW S        LLQLF K +    G G      +S  P  SSVA++P          Y M  LF SY     ++ N++KDQ  T  +FFFPG
Subjt:  MSSKFGHFWRSW-------LLQLFPKIDTSTPGSGLICRRWKSELPQASSVAIVPVRLSLFGSATY-MSSLFRSY--CPRIRHNQDKDQPLTSTFFFFPG

Query:  WAKWIFGSLLSLLVPSW----NKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEW
        W KWIFGSLLSLL+P+W    NKLQTLE EAE +IEEAE+VAEVVEK AE+ EK SAEI  KLPEKSKLKEAA +VE YSK+IAHDAHLTQDILHKVEEW
Subjt:  WAKWIFGSLLSLLVPSW----NKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEW

Query:  KQKLDKSETTVNEQIKKK
        KQKLDKSET +NEQI+KK
Subjt:  KQKLDKSETTVNEQIKKK

A0A6J1I3G6 uncharacterized protein LOC1114706513.3e-5463.98Show/hide
Query:  MSSKFGHFW-------RSWLLQLFPKIDTSTPGSGLICRRWK-SELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQPLTSTFFFFPGWA
        MSS  GHFW       RS LLQL  KI+TS P  G  CRR   SE PQ+SSVA+VP     FG    +SSL RSYCPR                     A
Subjt:  MSSKFGHFW-------RSWLLQLFPKIDTSTPGSGLICRRWK-SELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQPLTSTFFFFPGWA

Query:  KWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDK
        KWIFGSLLSL VPSWNK Q LEDEAE  IEEAE+VAEVVEKVAELTEKVSAEIG+KLPEKS++K+AA  VE YSKEIAHDA L Q ILHKVEEWKQKLDK
Subjt:  KWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDK

Query:  SETTVNEQIKK
        SE  +NEQ+KK
Subjt:  SETTVNEQIKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G14095.1 unknown protein4.1e-2545.99Show/hide
Query:  NQDKDQPL-TSTFFFFPGWAKWIFGSLLSLLVPSWN-----KLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSK
        N  K QP   + +F FP W +W+ GS +SL++  WN     KL+ +E EAE ++E  E VAE+VEKVA  T++++ E+ +KLPEK+KLK+ A ++E+ S+
Subjt:  NQDKDQPL-TSTFFFFPGWAKWIFGSLLSLLVPSWN-----KLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSK

Query:  EIAHDAHLTQDILHKVEEWKQKLDKSETTVNEQIKKK
          AH+AHLTQD LHKVE+  Q +D  E  +   I KK
Subjt:  EIAHDAHLTQDILHKVEEWKQKLDKSETTVNEQIKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCTAAATTTGGTCATTTTTGGAGAAGCTGGCTTCTTCAACTTTTTCCCAAGATAGACACCTCCACCCCGGGCAGCGGCTTGATCTGTCGTCGTTGGAAATCTGA
GCTACCGCAAGCCTCCTCTGTAGCCATTGTTCCGGTCAGGTTAAGCTTATTTGGTTCTGCAACTTATATGTCATCTCTCTTCAGATCTTATTGTCCCAGGATTAGACATA
ACCAAGATAAGGATCAGCCATTAACATCAACATTTTTCTTCTTCCCTGGTTGGGCCAAATGGATTTTTGGCTCCCTATTGTCCCTCTTGGTACCCAGTTGGAATAAATTG
CAAACTCTTGAAGATGAAGCTGAAACGATGATCGAAGAGGCTGAAAATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAATTAACAGAGAAGGTATCAGCAGAAATTGGTGA
CAAACTACCTGAAAAGAGTAAGCTTAAAGAGGCAGCTCATATTGTAGAAAACTATTCTAAGGAAATTGCTCATGATGCTCACCTAACCCAAGATATCCTCCATAAGGTGG
AAGAGTGGAAGCAAAAGCTAGATAAGTCGGAGACAACTGTGAATGAACAGATTAAGAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
CATTCATTATCATTACCATCTTCATAACACACACAAAATTCCTCTACTACTTCAATGTTGAGACTTTAATTTACAAATACATCTGTTGTGTCGTCTTTGGAGATCTTCAC
CTTTGGAAGCCTCTGTCCGACATGTCGTCTAAATTTGGTCATTTTTGGAGAAGCTGGCTTCTTCAACTTTTTCCCAAGATAGACACCTCCACCCCGGGCAGCGGCTTGAT
CTGTCGTCGTTGGAAATCTGAGCTACCGCAAGCCTCCTCTGTAGCCATTGTTCCGGTCAGGTTAAGCTTATTTGGTTCTGCAACTTATATGTCATCTCTCTTCAGATCTT
ATTGTCCCAGGATTAGACATAACCAAGATAAGGATCAGCCATTAACATCAACATTTTTCTTCTTCCCTGGTTGGGCCAAATGGATTTTTGGCTCCCTATTGTCCCTCTTG
GTACCCAGTTGGAATAAATTGCAAACTCTTGAAGATGAAGCTGAAACGATGATCGAAGAGGCTGAAAATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAATTAACAGAGAA
GGTATCAGCAGAAATTGGTGACAAACTACCTGAAAAGAGTAAGCTTAAAGAGGCAGCTCATATTGTAGAAAACTATTCTAAGGAAATTGCTCATGATGCTCACCTAACCC
AAGATATCCTCCATAAGGTGGAAGAGTGGAAGCAAAAGCTAGATAAGTCGGAGACAACTGTGAATGAACAGATTAAGAAGAAATAAAGGCAAATTAAAGGAAACAAGTGA
AAATGTATTAAATTATAAGGATCAATATATATAGCATATAAAAATTGTAAAACTTAAGAGAAAGAAATTTGATTTATTCTATCATGTC
Protein sequenceShow/hide protein sequence
MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICRRWKSELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQPLTSTFFFFPGWAKWIFGSLLSLLVPSWNKL
QTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDKSETTVNEQIKKK