CuGenDBv2

Gene ID	Lsi03G007630
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	copper-transporting ATPase PAA1, chloroplastic-like
Genome location	chr03:10610466..10630274
RNA-Seq Expression	Lsi03G007630
Synteny	Lsi03G007630
Gene Ontology terms	GO:0055070 - copper ion homeostasis (biological process) GO:0016020 - membrane (cellular component) GO:0005507 - copper ion binding (molecular function) GO:0043682 - copper transmembrane transporter activity, phosphorylative mechanism (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571679.1 Serine/arginine-rich splicing factor SC35, partial [Cucurbita argyrosperma subsp. sororia]

9.3e-65

77.84

Show/hide

Query:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA
        MDSA+S+M+SNAPL TLSTI+RSFS+LNFTHS SISPISTLSFSLR+A+PPLHR  KFISN +SGNGNGGVRGESGGGG GDDGGPDGGDV S  LAGEA
Subjt:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA

Query:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
        +DDA LSAD IVLGVG               +  PQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCGFSSKVQ
Subjt:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ

KAG7011404.1 Copper-transporting ATPase PAA1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.3e-65

77.84

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Query:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA
        MDSA+S+M+SNAPL TLSTI+RSFS+LNFTHS SISPISTLSFSLR+A+PPLHR  KFISN +SGNGNGGVRGESGGGG GDDGGPDGGDV S  LAGEA
Subjt:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA

Query:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
        +DDA LSAD IVLGVG               +  PQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCGFSSKVQ
Subjt:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ

XP_022963522.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita moschata]

9.3e-65

77.84

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Query:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA
        MDSA+S+M+SNAPL TLSTI+RSFS+LNFTHS SISPISTLSFSLR+A+PPLHR  KFISN +SGNGNGGVRGESGGGG GDDGGPDGGDV S  LAGEA
Subjt:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA

Query:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
        +DDA LSAD IVLGVG               +  PQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCGFSSKVQ
Subjt:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ

XP_022963523.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X2 [Cucurbita moschata]

9.3e-65

77.84

Show/hide

Query:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA
        MDSA+S+M+SNAPL TLSTI+RSFS+LNFTHS SISPISTLSFSLR+A+PPLHR  KFISN +SGNGNGGVRGESGGGG GDDGGPDGGDV S  LAGEA
Subjt:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA

Query:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
        +DDA LSAD IVLGVG               +  PQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCGFSSKVQ
Subjt:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ

XP_038887264.1 copper-transporting ATPase PAA1, chloroplastic-like [Benincasa hispida]

1.8e-71

84.86

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Query:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA
        MDSAISLM+SNAPLSTLSTISRSFSSLNFTH TSISPISTLSFSLR++LPPLHR QKFISNF+SGNGNGGVRGE+GGGG GDDGGPDG DVDSK LAGEA
Subjt:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA

Query:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
        DDDATLSADVIVLGVG               +  PQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
Subjt:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SK85 Copper-transporting ATPase PAA1

8.3e-59

76.34

Show/hide

Query:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGES-GGGGSGDDGGPDGGDVDSKFLAGE
        MDSAISLM+SN+ LSTLSTI RS         TSIS ISTLSF LR+ALPP+HR QKF+S FASGNGNGGVRGES GGGG GDDGGP+G DVDSK LAGE
Subjt:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGES-GGGGSGDDGGPDGGDVDSKFLAGE

Query:  ADDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
        ADDDATLSADVIV+GVG               +  PQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
Subjt:  ADDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ

A0A6J1HFH1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1

4.5e-65

77.84

Show/hide

Query:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA
        MDSA+S+M+SNAPL TLSTI+RSFS+LNFTHS SISPISTLSFSLR+A+PPLHR  KFISN +SGNGNGGVRGESGGGG GDDGGPDGGDV S  LAGEA
Subjt:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA

Query:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
        +DDA LSAD IVLGVG               +  PQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCGFSSKVQ
Subjt:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ

A0A6J1HI09 copper-transporting ATPase PAA1, chloroplastic-like isoform X2

4.5e-65

77.84

Show/hide

Query:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA
        MDSA+S+M+SNAPL TLSTI+RSFS+LNFTHS SISPISTLSFSLR+A+PPLHR  KFISN +SGNGNGGVRGESGGGG GDDGGPDGGDV S  LAGEA
Subjt:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA

Query:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
        +DDA LSAD IVLGVG               +  PQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCGFSSKVQ
Subjt:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ

A0A6J1HV12 copper-transporting ATPase PAA1, chloroplastic-like isoform X2

5.0e-64

76.76

Show/hide

Query:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA
        MDSA+S+M+SNAPL  LSTI+RSFS+LNFTHS SISPISTLSFSLR+A+PPLHR  KFISN +SGNGNGGVRGESGGGG GDDGGPDGGDV S  L+GEA
Subjt:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA

Query:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
        +DDATLSAD IVLGVG               +  PQVS+ASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCGFSSKVQ
Subjt:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ

A0A6J1HX97 copper-transporting ATPase PAA1, chloroplastic-like isoform X1

5.0e-64

76.76

Show/hide

Query:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA
        MDSA+S+M+SNAPL  LSTI+RSFS+LNFTHS SISPISTLSFSLR+A+PPLHR  KFISN +SGNGNGGVRGESGGGG GDDGGPDGGDV S  L+GEA
Subjt:  MDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQKFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEA

Query:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ
        +DDATLSAD IVLGVG               +  PQVS+ASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCGFSSKVQ
Subjt:  DDDATLSADVIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSSKVQ

SwissProt top hits

e value

%identity

Alignment

Q9SZC9 Copper-transporting ATPase PAA1, chloroplastic

5.4e-15

37.57

Show/hide

Query:  LSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQ-KFISNFA------SGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEADDDATLSAD
        L+  S S   L   H +  +  ++   SL +A+ P+ RH+ + +S+ +      S  G  G  G +GG G G  GG + GD  SK  A  +D  +  S+D
Subjt:  LSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQ-KFISNFA------SGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEADDDATLSAD

Query:  VIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS
        +I+L VG            +  +  PQV+ ASV+L +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S
Subjt:  VIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS

Arabidopsis top hits

e value

%identity

Alignment

AT4G33520.1 P-type ATP-ase 1

3.8e-16

37.57

Show/hide

Query:  LSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQ-KFISNFA------SGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEADDDATLSAD
        L+  S S   L   H +  +  ++   SL +A+ P+ RH+ + +S+ +      S  G  G  G +GG G G  GG + GD  SK  A  +D  +  S+D
Subjt:  LSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQ-KFISNFA------SGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEADDDATLSAD

Query:  VIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS
        +I+L VG            +  +  PQV+ ASV+L +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S
Subjt:  VIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS

AT4G33520.2 P-type ATP-ase 1

3.8e-16

37.57

Show/hide

Query:  LSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQ-KFISNFA------SGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEADDDATLSAD
        L+  S S   L   H +  +  ++   SL +A+ P+ RH+ + +S+ +      S  G  G  G +GG G G  GG + GD  SK  A  +D  +  S+D
Subjt:  LSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQ-KFISNFA------SGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEADDDATLSAD

Query:  VIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS
        +I+L VG            +  +  PQV+ ASV+L +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S
Subjt:  VIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS

AT4G33520.3 P-type ATP-ase 1

3.8e-16

37.57

Show/hide

Query:  LSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQ-KFISNFA------SGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEADDDATLSAD
        L+  S S   L   H +  +  ++   SL +A+ P+ RH+ + +S+ +      S  G  G  G +GG G G  GG + GD  SK  A  +D  +  S+D
Subjt:  LSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQ-KFISNFA------SGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEADDDATLSAD

Query:  VIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS
        +I+L VG            +  +  PQV+ ASV+L +ETAIVWPV EAK  P+W++ LG  LA HLT CGF S
Subjt:  VIVLGVGVR---------DEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCGFSS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATATTGTTGAATATATATATGAACGTCAACTTGTATACTTTTCAACCATGTACAAGAATAATATTTCTGGAATTATGGAGTTCCATTGGGTGATTATGGGTGGGCA
AAAGGATCAATTGTTTTTGGTGTGTGACTATAATTTGGCTTGCATGTCAATGTCAAGGGAGAGGAGCTTAGACAGTTCATTGGATTTGGATAAGCAAAGAACTGAACCAA
ACAAGGGTAAGAAGTCAAAAAAACCTCGTACTGCAATACCGACATTTGAACAACGACAATCTGATCACACCCTGGTGAAAACGTCTTGGAGATTTGGAAAGTCATTTAGT
ATGGACTTAACCAATATGGCTAGTGAAGATGAGGAGGATGAGGACCAAGCTTCTTGTTCAAAGAATGTAAAAAGGAAGATAGCATATGAACTAGATAATGTCGTGAAGGC
TAGTGTAGAGAGAGAGGTTATGGAAAAATCTCTTTTTTCTGACCCACTTCACCACAACAATAGGGATCCTTCACCTGTTACTACTCCACTTCCTTCACGTGTCAATAAAA
TTGTTCGTCCCAAGCCCAACAGACCACAAATTAACCCATTAGATTCACCTGAAAAAATTAGCGAGCACAATTCTCATAATACTGTTAGAGTACCACCATCAACAAATGCT
CCAGCTCCAATCTTAAATTCTCCATCGAGACCAAACTTCAAGAATAAACATTTTAAGGATCAAATGAGCATTTTAAAAATCGAGTGGTTGACCATATTCCTCCTTCCCTC
GTTTCCCATCTTCTCCTTTCTCCTTGGTTTCTCGGAGAGATTCCTTTCTTCCATGGATTCCGCCATCTCTCTAATGTCCTCCAATGCCCCTCTCTCAACTCTCTCCACCA
TCTCCCGCAGCTTCTCCAGCCTCAATTTCACCCACTCCACCTCCATTTCCCCTATCTCCACTCTTTCCTTCTCGCTTCGCTCTGCTCTTCCTCCCCTCCACCGTCATCAG
AAATTCATCTCCAATTTTGCTTCAGGCAATGGAAATGGCGGCGTTCGAGGAGAAAGCGGTGGCGGTGGTAGCGGCGACGATGGAGGACCAGACGGCGGGGATGTCGACTC
TAAGTTTCTTGCTGGAGAAGCTGACGACGACGCCACGCTGTCGGCGGACGTGATTGTTCTCGGTGTTGGAGTACGAGACGAGTTCTATCAGTTTTCACCACAAGTGTCAC
ATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGTGGCACTTGCGAAGCATTTG
ACTACTTGTGGTTTTTCTTCTAAGGTTCAAGTTTGTTCACCAACTATTGAGAGGTCTATGACAGATTCCTCTGCAATCAATAATGAGATTCTGGGGCCTGAATTTTATAA
TTTTGAGACAAGGTGCTGTAGGAGGCGACGTTTCACTATAGTAATGCAAAAGTTCAATGACGAGTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MDIVEYIYERQLVYFSTMYKNNISGIMEFHWVIMGGQKDQLFLVCDYNLACMSMSRERSLDSSLDLDKQRTEPNKGKKSKKPRTAIPTFEQRQSDHTLVKTSWRFGKSFS
MDLTNMASEDEEDEDQASCSKNVKRKIAYELDNVVKASVEREVMEKSLFSDPLHHNNRDPSPVTTPLPSRVNKIVRPKPNRPQINPLDSPEKISEHNSHNTVRVPPSTNA
PAPILNSPSRPNFKNKHFKDQMSILKIEWLTIFLLPSFPIFSFLLGFSERFLSSMDSAISLMSSNAPLSTLSTISRSFSSLNFTHSTSISPISTLSFSLRSALPPLHRHQ
KFISNFASGNGNGGVRGESGGGGSGDDGGPDGGDVDSKFLAGEADDDATLSADVIVLGVGVRDEFYQFSPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHL
TTCGFSSKVQVCSPTIERSMTDSSAINNEILGPEFYNFETRCCRRRRFTIVMQKFNDE

Lsi03G007630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome