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Lsi03G007670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G007670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTropomyosin-like
Genome locationchr03:10812361..10821861
RNA-Seq ExpressionLsi03G007670
SyntenyLsi03G007670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136872.1 uncharacterized protein LOC101218756 isoform X1 [Cucumis sativus]3.6e-6593.24Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVANLTEM SNL+SLQK LLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAIT++AHARSEKRQAEAAQ+AAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
        EVT+ELENTTKVFQLHMDELR KQEEINKRDKDIKLLEAIIQTLGG+E
Subjt:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
XP_022963475.1 uncharacterized protein LOC111463800 isoform X1 [Cucurbita moschata]3.9e-6796.62Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVAN+TEMASNLESLQK L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITA+AHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
        EVTRELENTTKVFQLHMDELR KQEEINKRDKDIKLLEAIIQTLGGKE
Subjt:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
XP_022963476.1 uncharacterized protein LOC111463800 isoform X2 [Cucurbita moschata]2.8e-6596.55Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVAN+TEMASNLESLQK L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITA+AHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLG
        EVTRELENTTKVFQLHMDELR KQEEINKRDKDIKLLEAIIQTLG
Subjt:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLG
XP_022967634.1 uncharacterized protein LOC111467076 isoform X1 [Cucurbita maxima]7.3e-6695.27Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWS AVAN+TEMASNLESLQK L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITA+AHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
        EVTRELENTTKVFQLHMDELR KQEEINKRDKDIKLLEAIIQTLGGK+
Subjt:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
XP_038886855.1 uncharacterized protein LOC120077075 isoform X1 [Benincasa hispida]1.9e-6695.95Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVANLTEMASNLESLQK LLKKAVYVDDETFARASLCS+QARTIKVLEQRVETLERELDAAITA+AHARSEKRQAEAAQ+AAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
        EVTRELENTTKVFQLHMDELR KQEEI+KRDKDIKLLEAIIQTLGGKE
Subjt:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
TrEMBL top hitse value%identityAlignment
A0A0A0K2J2 Uncharacterized protein1.8e-6593.24Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVANLTEM SNL+SLQK LLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAIT++AHARSEKRQAEAAQ+AAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
        EVT+ELENTTKVFQLHMDELR KQEEINKRDKDIKLLEAIIQTLGG+E
Subjt:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
A0A1S3C1M4 uncharacterized protein LOC1034954303.9e-6593.24Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVANLTEM SNL+ LQK LLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITA+AHARSEKRQAEAAQ+AAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
        EVT+ELENTTKVFQLHMDELR KQEEINKRDKDIKLLEAIIQTLGG+E
Subjt:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
A0A6J1HG82 uncharacterized protein LOC111463800 isoform X21.3e-6596.55Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVAN+TEMASNLESLQK L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITA+AHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLG
        EVTRELENTTKVFQLHMDELR KQEEINKRDKDIKLLEAIIQTLG
Subjt:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLG
A0A6J1HI40 uncharacterized protein LOC111463800 isoform X11.9e-6796.62Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWSGAVAN+TEMASNLESLQK L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITA+AHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
        EVTRELENTTKVFQLHMDELR KQEEINKRDKDIKLLEAIIQTLGGKE
Subjt:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
A0A6J1HXA5 uncharacterized protein LOC111467076 isoform X13.5e-6695.27Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ
        MEDKGKGTDRWS AVAN+TEMASNLESLQK L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITA+AHARSEKRQAEAAQKAAELHVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQ

Query:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
        EVTRELENTTKVFQLHMDELR KQEEINKRDKDIKLLEAIIQTLGGK+
Subjt:  EVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G64180.1 unknown protein8.9e-5475.84Show/hide
Query:  MEDKGKGTD-RWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHV
        ME++  G+D RW G++ N+TEMASNL+SLQK LLKKAV+V+++TF+RASL SEQARTIKVLEQRV+TLERELDAAITA+AHARSEKRQAE++QKAAE   
Subjt:  MEDKGKGTD-RWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHV

Query:  QEVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE
        Q+VT+ELENTTKVF+LHM+ELR  QE+I+KRD +IKLLEAIIQTLGGKE
Subjt:  QEVTRELENTTKVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACAAGGGTAAAGGAACGGACAGATGGAGCGGTGCTGTAGCCAATCTCACAGAGATGGCCTCCAATCTAGAGTCACTCCAGAAGTTTTTACTGAAGAAAGCCGT
CTATGTAGACGACGAGACGTTTGCCAGAGCTTCATTGTGCTCCGAACAAGCAAGGACAATCAAGGTTCTTGAACAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTG
CTATCACTGCTTCTGCCCATGCTCGTTCAGAAAAACGTCAGGCTGAGGCAGCACAAAAAGCTGCTGAACTACATGTGCAGGAGGTCACCAGAGAGCTTGAGAACACTACA
AAGGTATTTCAACTGCATATGGATGAATTACGCTTGAAGCAAGAAGAAATCAACAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAAACTCTTGGTGGAAA
AGAATGA
mRNA sequenceShow/hide mRNA sequence
ATTTGGCACAAATACCAAATCTAAGAACAATAACGCGGAAACATCGAAAGTTCTCATCGAATGCAAAGCATGATCGGGTGGGTTCTTAGCTCCCTCGCTAAGTCTCTACA
CGGATCATGAAGTTCAACGATAGTTGAATTGCGAATTTGCAGAACTGCACGCGTCGGAGAAGATTCGGATCATGGAGGACAAGGGTAAAGGAACGGACAGATGGAGCGGT
GCTGTAGCCAATCTCACAGAGATGGCCTCCAATCTAGAGTCACTCCAGAAGTTTTTACTGAAGAAAGCCGTCTATGTAGACGACGAGACGTTTGCCAGAGCTTCATTGTG
CTCCGAACAAGCAAGGACAATCAAGGTTCTTGAACAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTGCTATCACTGCTTCTGCCCATGCTCGTTCAGAAAAACGTC
AGGCTGAGGCAGCACAAAAAGCTGCTGAACTACATGTGCAGGAGGTCACCAGAGAGCTTGAGAACACTACAAAGGTATTTCAACTGCATATGGATGAATTACGCTTGAAG
CAAGAAGAAATCAACAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAAACTCTTGGTGGAAAAGAATGACGTCTGCAAATATGTGAGGATTTGCCTTTGAT
AATTAGGGTGTTAGTATTTTTCTTTTCTCTCTCTCTTTTTTCCTTCTTGTGTGGGTGAAGTATTACTGTAAAATATTTATGGATAGTCTGGTTGAGTCTGATTAGGAACA
TGGTGTGTAATATATTATTTTGAACTTGGTTTTTAAAATATAGATAAATCAAATTCAATTTACATTTGTGGATAACAATGTACAAGCTATTTGCTCCGTCAACTACTAAT
AAAAGAAAATAAAAAATAGAATGATACAATGTTTTAGTTTT
Protein sequenceShow/hide protein sequence
MEDKGKGTDRWSGAVANLTEMASNLESLQKFLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITASAHARSEKRQAEAAQKAAELHVQEVTRELENTT
KVFQLHMDELRLKQEEINKRDKDIKLLEAIIQTLGGKE