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Lsi03G007700 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G007700
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:10872474..10894878
RNA-Seq ExpressionLsi03G007700
SyntenyLsi03G007700
Gene Ontology termsNA
InterPro domainsIPR040306 - Os02g0753200-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031490.1 hypothetical protein E6C27_scaffold139G002510 [Cucumis melo var. makuwa]5.7e-4178.23Show/hide
Query:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP
        AEEEAE NS FNHTSSDD+DEDLAA AASTVTVNLSIRDKSLFELPQPSS PGLPSAFDAFS                   EVSGPPEFLNNSVEEYAAP
Subjt:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP

Query:  KDIDQPRGGHGSRRNRKEKKDLPT
        +D DQPRGGHG RRNRKEKKDLPT
Subjt:  KDIDQPRGGHGSRRNRKEKKDLPT

KAG6571683.1 putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.7e-4174.81Show/hide
Query:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP
        AEEEAEDNS FNHTSSDD+DEDLAA AAS+VT NLSIRDKSLFELPQPSSHPGLPSAFDAFS                   EVSGPPEFLNNSVEEYAAP
Subjt:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP

Query:  KDIDQPRGGHGSRRNRKEKKDLPTVMRVDVR
        +D+DQPRGGHGSRRNRKEKKD PT   V+ +
Subjt:  KDIDQPRGGHGSRRNRKEKKDLPTVMRVDVR

XP_008455215.2 PREDICTED: uncharacterized protein LOC103495434 [Cucumis melo]5.7e-4178.23Show/hide
Query:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP
        AEEEAE NS FNHTSSDD+DEDLAA AASTVTVNLSIRDKSLFELPQPSS PGLPSAFDAFS                   EVSGPPEFLNNSVEEYAAP
Subjt:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP

Query:  KDIDQPRGGHGSRRNRKEKKDLPT
        +D DQPRGGHG RRNRKEKKDLPT
Subjt:  KDIDQPRGGHGSRRNRKEKKDLPT

XP_022963474.1 uncharacterized protein LOC111463799 [Cucurbita moschata]1.3e-4074.05Show/hide
Query:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP
        AEEEAEDNS FNHTSSDD+DEDLAA AAS+VT NLSIRDKSLFELPQPSSHPGLPSAFDAFS                   EVSGPPEFLNNSVEEYAAP
Subjt:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP

Query:  KDIDQPRGGHGSRRNRKEKKDLPTVMRVDVR
        +D+DQPRGGHGSRRNRKEK+D PT   V+ +
Subjt:  KDIDQPRGGHGSRRNRKEKKDLPTVMRVDVR

XP_038888650.1 uncharacterized protein LOC120078451 [Benincasa hispida]8.8e-4278.57Show/hide
Query:  AEEEAEDNSAFNHTSSDDEDEDLAAT--AASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYA
        AEEEAEDNS FNHTSSDD+DEDLAAT  AASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFS                   EVSGPPEFLNNSVEEYA
Subjt:  AEEEAEDNSAFNHTSSDDEDEDLAAT--AASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYA

Query:  APKDIDQPRGGHGSRRNRKEKKDLPT
        AP+++DQPRGGHG RRNRKEKKDLPT
Subjt:  APKDIDQPRGGHGSRRNRKEKKDLPT

TrEMBL top hitse value%identityAlignment
A0A0A0K7B5 Uncharacterized protein8.3e-3874.42Show/hide
Query:  AEEEAEDNSAFNHTSSDDEDEDLA---ATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEY
        AEEEA+ NS FNHTSSDD+DEDLA   A AASTVTVNLSIRDKSLFELPQPSS PGLPSAFDAFS                   EVSGPPEFLNNSVEEY
Subjt:  AEEEAEDNSAFNHTSSDDEDEDLA---ATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEY

Query:  AAPKDIDQPRG--GHGSRRNRKEKKDLPT
        AAP+D DQPRG  GHG RRNRKEKKDLPT
Subjt:  AAPKDIDQPRG--GHGSRRNRKEKKDLPT

A0A1S3C0J1 uncharacterized protein LOC1034954342.7e-4178.23Show/hide
Query:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP
        AEEEAE NS FNHTSSDD+DEDLAA AASTVTVNLSIRDKSLFELPQPSS PGLPSAFDAFS                   EVSGPPEFLNNSVEEYAAP
Subjt:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP

Query:  KDIDQPRGGHGSRRNRKEKKDLPT
        +D DQPRGGHG RRNRKEKKDLPT
Subjt:  KDIDQPRGGHGSRRNRKEKKDLPT

A0A5A7SL87 Uncharacterized protein2.7e-4178.23Show/hide
Query:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP
        AEEEAE NS FNHTSSDD+DEDLAA AASTVTVNLSIRDKSLFELPQPSS PGLPSAFDAFS                   EVSGPPEFLNNSVEEYAAP
Subjt:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP

Query:  KDIDQPRGGHGSRRNRKEKKDLPT
        +D DQPRGGHG RRNRKEKKDLPT
Subjt:  KDIDQPRGGHGSRRNRKEKKDLPT

A0A6J1HK72 uncharacterized protein LOC1114637996.1e-4174.05Show/hide
Query:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP
        AEEEAEDNS FNHTSSDD+DEDLAA AAS+VT NLSIRDKSLFELPQPSSHPGLPSAFDAFS                   EVSGPPEFLNNSVEEYAAP
Subjt:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP

Query:  KDIDQPRGGHGSRRNRKEKKDLPTVMRVDVR
        +D+DQPRGGHGSRRNRKEK+D PT   V+ +
Subjt:  KDIDQPRGGHGSRRNRKEKKDLPTVMRVDVR

A0A6J1HRB5 uncharacterized protein LOC1114670682.6e-3972.52Show/hide
Query:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP
        AEEEAEDN+ FNHTSSDD+DEDLA  AAS+VT NLSIRDKSLFELPQPSSHPGLPSAFDAFS                   EVSGPPEFLNNSVEEYAAP
Subjt:  AEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAP

Query:  KDIDQPRGGHGSRRNRKEKKDLPTVMRVDVR
        +D+DQPRGGHGS RN KEKKDLPT   V+ +
Subjt:  KDIDQPRGGHGSRRNRKEKKDLPTVMRVDVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGCCGAAGAAGAAGCTGAAGACAACTCTGCCTTCAACCACACCTCTTCCGACGATGAGGACGAAGATCTTGCCGCCACCGCCGCCTCTACGGTTACCGTCAATCT
TTCCATACGTGACAAGTCACTCTTCGAACTTCCGCAGCCCTCCTCTCATCCCGGCCTGCCTTCTGCATTCGACGCTTTCTCCGAATTGAGCGAATTCGGAGACTGTTCGT
TTCCTGATTTTGTTTTCCGTGGGCTACCGGAGGTTTCAGGACCGCCGGAGTTTCTGAATAATTCGGTTGAGGAGTACGCTGCACCGAAAGATATCGATCAGCCGCGAGGG
GGCCATGGGAGCCGTAGGAATCGTAAGGAGAAGAAAGATTTGCCTACTGTTATGCGGGTAGATGTTCGGCATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCACGCCGAAGAAGAAGCTGAAGACAACTCTGCCTTCAACCACACCTCTTCCGACGATGAGGACGAAGATCTTGCCGCCACCGCCGCCTCTACGGTTACCGTCAATCT
TTCCATACGTGACAAGTCACTCTTCGAACTTCCGCAGCCCTCCTCTCATCCCGGCCTGCCTTCTGCATTCGACGCTTTCTCCGAATTGAGCGAATTCGGAGACTGTTCGT
TTCCTGATTTTGTTTTCCGTGGGCTACCGGAGGTTTCAGGACCGCCGGAGTTTCTGAATAATTCGGTTGAGGAGTACGCTGCACCGAAAGATATCGATCAGCCGCGAGGG
GGCCATGGGAGCCGTAGGAATCGTAAGGAGAAGAAAGATTTGCCTACTGTTATGCGGGTAGATGTTCGGCATGAATAG
Protein sequenceShow/hide protein sequence
MHAEEEAEDNSAFNHTSSDDEDEDLAATAASTVTVNLSIRDKSLFELPQPSSHPGLPSAFDAFSELSEFGDCSFPDFVFRGLPEVSGPPEFLNNSVEEYAAPKDIDQPRG
GHGSRRNRKEKKDLPTVMRVDVRHE