; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G007950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G007950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlycine-rich RNA-binding protein
Genome locationchr03:11693359..11696399
RNA-Seq ExpressionLsi03G007950
SyntenyLsi03G007950
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136860.1 glycine-rich RNA-binding protein RZ1A [Cucumis sativus]6.2e-10397.16Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPY
        GRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYS GGGGG GRYGPDRNGDR GGRNRSSGDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERRGSGGFRSG
        ERRGSGGFRSG
Subjt:  ERRGSGGFRSG

XP_008455237.1 PREDICTED: glycine-rich RNA-binding protein RZ1A [Cucumis melo]1.2e-10395.77Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSG
        GRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY     GGGGGSGRYGPDRNGDR GGRNRS+GDRGGSGSDRYSRDRSG
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSG

Query:  PYERRGSGGFRSG
        PYERRGSGGFRSG
Subjt:  PYERRGSGGFRSG

XP_022154392.1 glycine-rich RNA-binding protein RZ1A [Momordica charantia]5.2e-10294.69Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYERR
        RDHDRDR RD GG RGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGGGSGRYGPDRNGDR GGRNRSSGDRGGSGSDR++RDRSGPYERR
Subjt:  RDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYERR

Query:  GSGGFRS
         SGGFRS
Subjt:  GSGGFRS

XP_022988948.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita maxima]1.2e-9892.89Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYE
        RDHDRDR RD GG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG  GGGSGRYGPDRNGDRSGGRNR +GDRGGSGSDRYSRDRSGPYE
Subjt:  RDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYE

Query:  RR--GSGGFRS
        RR  GSGGFRS
Subjt:  RR--GSGGFRS

XP_038888155.1 glycine-rich RNA-binding protein RZ1A [Benincasa hispida]5.0e-10597.63Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS--GGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPY
        GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS  GGGGGSGRYGPDRNGDR GGRNRS+GDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS--GGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERRGSGGFRSG
        ERRGSGGFRSG
Subjt:  ERRGSGGFRSG

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein3.0e-10397.16Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPY
        GRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYS GGGGG GRYGPDRNGDR GGRNRSSGDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPY

Query:  ERRGSGGFRSG
        ERRGSGGFRSG
Subjt:  ERRGSGGFRSG

A0A1S3C164 glycine-rich RNA-binding protein RZ1A6.0e-10495.77Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSG
        GRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY     GGGGGSGRYGPDRNGDR GGRNRS+GDRGGSGSDRYSRDRSG
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSG

Query:  PYERRGSGGFRSG
        PYERRGSGGFRSG
Subjt:  PYERRGSGGFRSG

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A2.5e-10294.69Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYERR
        RDHDRDR RD GG RGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGGGSGRYGPDRNGDR GGRNRSSGDRGGSGSDR++RDRSGPYERR
Subjt:  RDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYERR

Query:  GSGGFRS
         SGGFRS
Subjt:  GSGGFRS

A0A6J1EI50 glycine-rich RNA-binding protein RZ1A-like8.4e-9892.38Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYER
        RD++RDR RD GG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGGGGSGRYGPDRNGDRSGGRNR +GDRGGSGSDRYSRDRSGPYER
Subjt:  RDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYER

Query:  R--GSGGFRS
        R  GSGGFRS
Subjt:  R--GSGGFRS

A0A6J1JNT9 glycine-rich RNA-binding protein RZ1A-like5.8e-9992.89Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYE
        RDHDRDR RD GG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG  GGGSGRYGPDRNGDRSGGRNR +GDRGGSGSDRYSRDRSGPYE
Subjt:  RDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYE

Query:  RR--GSGGFRS
        RR  GSGGFRS
Subjt:  RR--GSGGFRS

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A9.8e-2744.57Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG DLDGRSITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRY--GGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSG
                GG  G   G  ++ G  G +       GG GG Y  GGR+  YSGGGGG    G    G   GGR R  G+ GG G
Subjt:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRY--GGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSG

P49311 Glycine-rich RNA-binding protein GRP2A4.1e-2542.44Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T +R L+ AF +FG LV++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG DLDGRSITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGG---RDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYERR
                GG RG   G            R     GG GG YGG       YSGGGGG    G    G   GGR    G  GG G         G Y   
Subjt:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGG---RDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYERR

Query:  GSGGF
        G GG+
Subjt:  GSGGF

Q03250 Glycine-rich RNA-binding protein 71.7e-2642.55Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ                   
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGR------YGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSG
           RG   GG      G  ++ G  G ++    S GG GGR      Y G    YS  GGG G YG    G R GG     G+ GG G
Subjt:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGR------YGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSG

Q03878 Glycine-rich RNA-binding protein4.1e-2545.3Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH
        EVEYRCF+GGL+W+T+D  L++AF +FG + ++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG +LDGR+ITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGS
            GR  GG  G   G        G+  R    EGG GG YGGR +   GGGGG G  G    G R GG     G  GGS
Subjt:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGS

Q9LIN3 Glycine-rich RNA-binding protein RZ1A2.4e-6558Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSGG
         R +DRDR R SGG  G   GDCFKCGKPGHFARECPSE  R G                                            RY  +DD+Y   
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSGG

Query:  GGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF
         GG  RYGPDR+G+R+GGR+R  G RG  G +R+SR    PY+R  +GGF
Subjt:  GGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 21.2e-2742.55Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ                   
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGR------YGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSG
           RG   GG      G  ++ G  G ++    S GG GGR      Y G    YS  GGG G YG    G R GG     G+ GG G
Subjt:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGR------YGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSG

AT2G21660.2 cold, circadian rhythm, and rna binding 28.5e-2645.03Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGDRPRGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ    G G  H G    G  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGDRPRGRD

Query:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGG
        +    GR  GG   S  G  +             S GG GG YGG   +  GGGG  G  G    G   GG
Subjt:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.7e-6658Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSGG
         R +DRDR R SGG  G   GDCFKCGKPGHFARECPSE  R G                                            RY  +DD+Y   
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSGG

Query:  GGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF
         GG  RYGPDR+G+R+GGR+R  G RG  G +R+SR    PY+R  +GGF
Subjt:  GGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF

AT4G39260.1 cold, circadian rhythm, and RNA binding 18.5e-2644.51Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH
        EVEYRCF+GGL+W+T+D  L+  F +FG ++++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG    G        
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSG
           RG   GG R    G     G  G+        GG GG Y  R   Y  GGGG GR      G   GGR    G  GG G
Subjt:  DRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.4e-2539.9Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA +   R F+GGLS   +DR L+ AF +FG +++ ++++++ +GRSRGFGF+TF +++AMDE+I+ M+G D   R I+V++A+P  G        R  G
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRGRDSG---------GARGSNSG-----DCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSG
          H    GRDSG         G  G   G     +CFKCG+ GH+AR+CPS  GGRGG  GG   + S  GG  GR     + DR   R R   DR    
Subjt:  RDHDRDRGRDSG---------GARGSNSG-----DCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSG

Query:  SDRYSRDR
        +   +RDR
Subjt:  SDRYSRDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTCTGAAAGAGGCGTTTGAAAAGTTTGGCCATCTTGTCGAGGCCAA
GGTAGTTGTTGACAAATTTTCTGGACGTTCCCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGATGAGGCAATCAAAGCCATGAATGGAATGGATTTAG
ATGGCCGGAGTATTACAGTTGATAAGGCTCAACCCAACCAAGGTTCAGGTAGAGATCATGATGGTGATCGTCCACGTGGTCGTGATCATGATCGCGATCGAGGTCGAGAT
TCTGGTGGTGCACGTGGATCTAACAGTGGAGATTGCTTTAAATGCGGGAAACCTGGACATTTTGCTAGGGAATGTCCCAGTGAAGGTGGTAGAGGAGGTAGGTATGGAGG
TAGGGATGACAAATATAGTGGTGGTGGCGGCGGCAGTGGTCGCTATGGTCCAGACCGAAATGGAGATAGATCTGGTGGGCGCAATAGGAGTAGTGGTGATCGAGGAGGTT
CGGGAAGTGATCGATATAGCCGTGACCGCTCTGGGCCGTATGAGCGACGTGGTTCTGGTGGTTTTCGTTCTGGATAG
mRNA sequenceShow/hide mRNA sequence
CGTTGACTGGCTCTTTGCCCTACAACCAGTTTAACCTTCTCACCCTCACTTTGCCTTCTCCAGCTTTTAGGTTCTCTCGTTACCGAATCGAATTCCTAGGGCTTTCGTTC
TTCACAAATTCTCTCATAATGGCTGATGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTCTGAAAGAGGCGTTTGAAAAGTTTGG
CCATCTTGTCGAGGCCAAGGTAGTTGTTGACAAATTTTCTGGACGTTCCCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGATGAGGCAATCAAAGCCA
TGAATGGAATGGATTTAGATGGCCGGAGTATTACAGTTGATAAGGCTCAACCCAACCAAGGTTCAGGTAGAGATCATGATGGTGATCGTCCACGTGGTCGTGATCATGAT
CGCGATCGAGGTCGAGATTCTGGTGGTGCACGTGGATCTAACAGTGGAGATTGCTTTAAATGCGGGAAACCTGGACATTTTGCTAGGGAATGTCCCAGTGAAGGTGGTAG
AGGAGGTAGGTATGGAGGTAGGGATGACAAATATAGTGGTGGTGGCGGCGGCAGTGGTCGCTATGGTCCAGACCGAAATGGAGATAGATCTGGTGGGCGCAATAGGAGTA
GTGGTGATCGAGGAGGTTCGGGAAGTGATCGATATAGCCGTGACCGCTCTGGGCCGTATGAGCGACGTGGTTCTGGTGGTTTTCGTTCTGGATAGAATTGTGACTTATCT
TGTAGGCTTACATGGTGGGATCTTGCTGTTATGTCCTGCAGAATGTTAATGTTCCTTTCTACAGGTTGTCTCTCGTACAGTTCAGAGTTCTGAAGTGCAGAACTTGACGT
TAATATTGAGATGTTTGTGTTCCTATGTGATGAATTTGGTGAATTTGGTATCTTGGTACAGTGGTGTGGTGTCTAATGTGTTCTTGACATATTCATTCGAATCTGGTTTT
ATGATCTTTGAGTGCCCTAGTAGCTGCTGCATTACTTGTGACACATACACAGGGAATTTCAATAACTGCTGCACCATTTCATTTTGAAAAATTTCTTTTAGAATACAACT
AGACCTGGTTTTTGATGTTGGATGGGGTATTGAGAGGACCTTGCTTTTGATAAGCTGTGACTAGAGATCTGTGTACTGACCTGGAAACTTTGAAGTGAAATCTCCTTTTC
AGAACGTTGTTCCCGTTGTCTTATAAATTCCACAGGAGTTTACAGCATCCTTCCTTTTTATGGTCTTATTGGGTGCATAATACAGTTTCTTGTTAATTGGGCGCTTTAAA
CTTAAAATTTACCAAAGCCTTTGGGATGCTCAAGCAATTTTGCAAATAAAATCTCTTAATCTACAAATACGTCCTGCTGGCATATGGTTGAGGGGTATTTCATGTGCTAA
AATGCCCGGCAAGTTGTTTGGAAGCTCTTGATGAGTTCTGCAACTGCTGCCCCATCTTTTCCACTTACGGTTCTATTTCCGCTTTGTTCTTGTTGGGGGAGACTTTTGAT
GTTCTTGCCTGTTCTGGATCTACTTGTTCTTGGTTTTGTTTGCGGCGATTAGTTCAGATGTGTGATTCTGTGCATCCAAGGTTTTCATTCAAAGTTTGTTTGGAGTTTCT
ATATTGATCGTCCCTTTCACCTCTGGATCAGTTTGGTTTCAAATCCATTGAGGGTTATTTCTATTATTCTTTCTCTTCTCCACCTCTGTAATTTACTCATATGTATCTCA
GTTTTCATTCTTGTTTGCTGCCATGATGAATGTGTTATAGGCAACACCAAGGAAGCCAAATAGTAGTCATTCCCGTCGACGTTGTTACAACAATAAATGTTTACCAATCA
TATTTTAAACTTCTTTGGCTTTTTTGTTTGTTCATGATTTCTTTTCCATAGTTGTGTTTGTTGTCATCCTGGAAGGGATGGTTTTTTTATCTTCTATTTTTGTGGCCCCA
AACATTTTCAAGTTGAAACTGTTTTATTGTGAAGAGAAAAATTGACATGTTTGAGTAATTTGGGATGCTTTTGGAAATTGCAGATTAAGTGATCTGAAATTTCACTTAAA
TCTGGTTTCTGGAATATATTTTATTTATTGCCCCTCTCCCTCTCTATGACTTTAGTTTCTGTGTAAGATTTACATTGGTGCAATATTTGTTTGAATACTGAAAATGCTAA
GTGTTTTGTTCAA
Protein sequenceShow/hide protein sequence
MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDHDRDRGRD
SGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGFRSG