CuGenDBv2

Gene ID	Lsi03G008040
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Phosphatidylserine decarboxylase proenzyme 2
Genome location	chr03:11905454..11906134
RNA-Seq Expression	Lsi03G008040
Synteny	Lsi03G008040
Gene Ontology terms	GO:0006646 - phosphatidylethanolamine biosynthetic process (biological process) GO:0016540 - protein autoprocessing (biological process) GO:0016020 - membrane (cellular component) GO:0004609 - phosphatidylserine decarboxylase activity (molecular function) GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR003817 - Phosphatidylserine decarboxylase-related

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571700.1 Phosphatidylserine decarboxylase proenzyme 2, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-33

82.83

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Query:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKG-TNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD
        MGNG+SKLD  SSSSSDPDAE+SR +RFK R+HLRRFLRRRR G  NG G RSHTKLGS +DFAGIAVLTLI A+MNFKDKWLACVSFGEQTFRTGISD
Subjt:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKG-TNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD

XP_008455245.1 PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Cucumis melo]

1.4e-39

89.11

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Query:  MGNGTSKLD---SSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGIS
        MGNGTSKLD   SSSSSSSDPDAEESR++RFKNRVHLRRFLRRRRK TNG GFRSHTKLGSA+DFAGIA+LTLIRARM+FKD+WLACVSFGEQTFRTGIS
Subjt:  MGNGTSKLD---SSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

XP_011658767.2 phosphatidylserine decarboxylase proenzyme 2 [Cucumis sativus]

3.4e-38

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Query:  MGNGTSKLDSS--SSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD
        MGNGTSK DSS  SSSSSDPDAEESR++RFKNRVHLRRFLRRRRK TNG  FRSHTKLGSA+DFAGIA+LTLIRARM+FKD+WLACVSFGEQTFRTGISD
Subjt:  MGNGTSKLDSS--SSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD

XP_022963616.1 phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita moschata]

1.9e-33

82.83

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Query:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKG-TNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD
        MGNG+SKLD  SSSSSDPDAE+SR +RFK R+HLRRFLRRRR G  NG G RSHTKLGS +DFAGIAVLTLI A+MNFKDKWLACVSFGEQTFRTGISD
Subjt:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKG-TNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD

XP_038888956.1 phosphatidylserine decarboxylase proenzyme 2-like [Benincasa hispida]

2.6e-38

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Query:  MGNGTSKLD-SSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKG-TNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD
        MGNG SK+D SSSSSSSDPDAEESR+ARFK+RVHLRRFLRRRRKG TNG GF SHTKLGS +DFAGIA+LTLIRARMNFKDKWLACVSFGEQTFRTGISD
Subjt:  MGNGTSKLD-SSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKG-TNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K2G8 Uncharacterized protein

1.6e-38

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Query:  MGNGTSKLDSS--SSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD
        MGNGTSK DSS  SSSSSDPDAEESR++RFKNRVHLRRFLRRRRK TNG  FRSHTKLGSA+DFAGIA+LTLIRARM+FKD+WLACVSFGEQTFRTGISD
Subjt:  MGNGTSKLDSS--SSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD

A0A1S3C020 Phosphatidylserine decarboxylase proenzyme 2

6.7e-40

89.11

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Query:  MGNGTSKLD---SSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGIS
        MGNGTSKLD   SSSSSSSDPDAEESR++RFKNRVHLRRFLRRRRK TNG GFRSHTKLGSA+DFAGIA+LTLIRARM+FKD+WLACVSFGEQTFRTGIS
Subjt:  MGNGTSKLD---SSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

A0A6J1DLJ7 Phosphatidylserine decarboxylase proenzyme 2

2.1e-33

81.63

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Query:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD
        MGNG+S   SSSSSSSDPDA++SR+ARFKNR+H RRFLRRRR+ +N  G  SHTKLGS DDFAGIAVLTLIRARM FKDKWLACVSFGEQTFRTGISD
Subjt:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD

A0A6J1HGJ7 Phosphatidylserine decarboxylase proenzyme 2

9.3e-34

82.83

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Query:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKG-TNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD
        MGNG+SKLD  SSSSSDPDAE+SR +RFK R+HLRRFLRRRR G  NG G RSHTKLGS +DFAGIAVLTLI A+MNFKDKWLACVSFGEQTFRTGISD
Subjt:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKG-TNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD

A0A6J1HVG6 Phosphatidylserine decarboxylase proenzyme 2

1.0e-32

81.82

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Query:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKG-TNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD
        MGNG+SKLD  SSSSSDPD EESR +RFK R+HLRRFLRRRR G  NG G  SHTKLGS +DFAGIAVLTLI A+MNFKDKWLACVSFGEQTFRTGISD
Subjt:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKG-TNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD

SwissProt top hits

e value

%identity

Alignment

A4GNA8 Phosphatidylserine decarboxylase proenzyme 3

4.6e-14

52.48

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Query:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRS---HTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGIS
        MGNG S            + +ESR  R K R  ++ F  RRR    G G  S     +  SADDFAGIA+LTLI A M FKDKWLACVSFGEQTFR+ IS
Subjt:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRS---HTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

F4KAK5 Phosphatidylserine decarboxylase proenzyme 2

9.4e-15

47.96

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Query:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD
        MGNG S+           +A+ESR +R ++++   R  RR  + +         +  SA+DF+GIA+LTLI A M FKDKWLACVSFGEQTFRT ISD
Subjt:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD

Arabidopsis top hits

e value

%identity

Alignment

AT4G25970.1 phosphatidylserine decarboxylase 3

3.3e-15

52.48

Show/hide

Query:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRS---HTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGIS
        MGNG S            + +ESR  R K R  ++ F  RRR    G G  S     +  SADDFAGIA+LTLI A M FKDKWLACVSFGEQTFR+ IS
Subjt:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRS---HTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGIS

Query:  D
        D
Subjt:  D

AT5G57190.1 phosphatidylserine decarboxylase 2

6.7e-16

47.96

Show/hide

Query:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD
        MGNG S+           +A+ESR +R ++++   R  RR  + +         +  SA+DF+GIA+LTLI A M FKDKWLACVSFGEQTFRT ISD
Subjt:  MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISD

Sequences

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CDS sequence

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ATGGGGAATGGCACTTCCAAGCTCGATTCCTCCTCTTCTTCTTCTTCCGATCCTGATGCTGAAGAATCGCGTGTCGCTCGATTCAAGAATCGTGTGCATCTTCGTCGATT
TCTTCGTAGGCGCCGTAAAGGCACCAATGGCGGAGGTTTTCGTTCTCATACCAAACTTGGCTCTGCGGATGATTTCGCTGGAATCGCTGTTCTAACTCTTATTCGTGCGC
GAATGAATTTCAAGGATAAGTGGCTCGCTTGTGTTTCTTTTGGAGAACAGACTTTTCGAACGGGAATCTCTGATCAGTTAAGTGTC

mRNA sequence

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AAAAGATTGGATGCTTTAAAGAAATAGCCGCCAGCAGGCAGAGGCCACGATACAGCATAAAGGCAGACCAAAAAGTTTGAATTGACTGACATTCTTCTAATTCACCTTGA
AAATAATCAAATCACTTAAAACAAATACCCCACAAAAAACAAAGCCAACAAAGTCAAATCGTCGTTATGAATTTCTCTGGCAACGCATTTTCCCATATTCCACAGCGCAC
CCCAATACCTGAAAACACAAACTCCCAATCCAATTCCTCCACTTCCTGACCGGAGCTGCTGCAGCAGAGCCAATAATGGGGAATGGCACTTCCAAGCTCGATTCCTCCTC
TTCTTCTTCTTCCGATCCTGATGCTGAAGAATCGCGTGTCGCTCGATTCAAGAATCGTGTGCATCTTCGTCGATTTCTTCGTAGGCGCCGTAAAGGCACCAATGGCGGAG
GTTTTCGTTCTCATACCAAACTTGGCTCTGCGGATGATTTCGCTGGAATCGCTGTTCTAACTCTTATTCGTGCGCGAATGAATTTCAAGGATAAGTGGCTCGCTTGTGTT
TCTTTTGGAGAACAGACTTTTCGAACGGGAATCTCTGATCAGTTAAGTGTC

Protein sequence

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MGNGTSKLDSSSSSSSDPDAEESRVARFKNRVHLRRFLRRRRKGTNGGGFRSHTKLGSADDFAGIAVLTLIRARMNFKDKWLACVSFGEQTFRTGISDQLSV

Lsi03G008040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome