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Lsi03G008120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G008120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF2647 domain-containing protein
Genome locationchr03:12214892..12215130
RNA-Seq ExpressionLsi03G008120
SyntenyLsi03G008120
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8376866.1 hypothetical protein HHK36_031466 [Tetracentron sinense]2.3e-2493.65Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK
        + RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLENPYIPYQ MDSYLSSTGLGSASMGK
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK

QTW91834.1 hypothetical protein RF68 [Quercus saravanensis]5.9e-2593.65Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK
        + RIDGAIQVRSNVDPTFYS+VGSGRSGGDH GSSLLENPYIPYQYMDSYLSSTGLGSASMGK
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK

QVD38994.1 hypothetical protein RF68 [Morus alba var. multicaulis]2.9e-2493.65Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK
        + RIDGAIQVRSNVDPTFYSLVGSGRSG DH GSSLLENPYIPYQYMDSYLSSTGLGSASMGK
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK

QVD40841.1 hypothetical protein RF68 [Potentilla sischanensis]2.9e-2493.65Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK
        + RIDGAIQVRSNVDPTFYSLVGSGRSG DH GSSLLENPYIPYQYMDSYLSSTGLGSASMGK
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK

YP_009865163.1 hypothetical protein RF68 [Alchemilla argyrophylla]3.5e-2595.24Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK
        + RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLENPYIPYQYMDSYLSSTGLGSASMGK
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK

TrEMBL top hitse value%identityAlignment
A0A193BNJ9 Uncharacterized protein ycf681.4e-2493.65Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK
        + RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLENPYIPYQ MDSYLSSTGLGSASMGK
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK

A0A2N9HJI4 Uncharacterized protein ycf683.8e-2596.72Show/hide
Query:  RIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK
        RIDGAIQVRSNVDPTFYS+VGSGRSGGDH GSSLLENPYIPYQYMDSYLSSTGLGSASMGK
Subjt:  RIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK

A0A482E9T2 Uncharacterized protein ycf681.9e-2493.65Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK
        + RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLENPYIPYQ MDSYLSSTGLGSASMGK
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK

A0A7D3QBS3 Uncharacterized protein ycf681.7e-2595.24Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK
        + RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLENPYIPYQYMDSYLSSTGLGSASMGK
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK

A0A7D3UNA0 Uncharacterized protein ycf681.7e-2595.24Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK
        + RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLENPYIPYQYMDSYLSSTGLGSASMGK
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK

SwissProt top hitse value%identityAlignment
P03938 Uncharacterized protein ycf681.3e-0686.21Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGG
        + RIDGAIQVRS+VD TFYSLVGSGRSGG
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGG

P52807 Uncharacterized protein ycf682.6e-1572.41Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGD---HLGSSLLENPYIPYQYMDSYLSSTG
        + RIDGAIQVRSN DPTFYS V  G  G     HLGSSLLENPYIPYQ MD YLS TG
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGD---HLGSSLLENPYIPYQYMDSYLSSTG

Q49KT9 Uncharacterized protein ycf687.3e-2692.06Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK
        + RIDGAIQVRSNVDPTFYSLVGSGRSGGD  GSSLLENPYIPYQ MDSYLSSTGLGSASMGK
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK

Q6L3C9 Uncharacterized protein ycf681.3e-0686.21Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGG
        + RIDGAIQVRS+VD TFYSLVGSGRSGG
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGG

Q85WV9 Uncharacterized protein ycf681.5e-1572.41Show/hide
Query:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGD---HLGSSLLENPYIPYQYMDSYLSSTG
        + RIDGAIQVRSN DPTFYS V  G  GG    H GSSLLENPYIPYQ MD YLS TG
Subjt:  MARIDGAIQVRSNVDPTFYSLVGSGRSGGD---HLGSSLLENPYIPYQYMDSYLSSTG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCT
CTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCT
CTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAA
Protein sequenceShow/hide protein sequence
MARIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLGSASMGK