; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G008570 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G008570
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPAP_fibrillin domain-containing protein
Genome locationchr03:14066516..14067481
RNA-Seq ExpressionLsi03G008570
SyntenyLsi03G008570
Gene Ontology termsNA
InterPro domainsIPR039633 - Plastid-lipid-associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038351.1 putative plastid-lipid-associated protein 4 [Cucumis melo var. makuwa]8.5e-3180Show/hide
Query:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSIFKNTNLLIASPSHKWRLRISFFPAFLNKGK--DLNALKEELLQAIAPLDRGAEATPEDQEMVDR
        MA+ALSSSTVTPT K  PPSTSQP RFL  IPSN    NTNLL +SPSHKWRLRISFFPAFLNKGK  ++ ALK+ELLQAIAPLDRGAEATPEDQEMVD+
Subjt:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSIFKNTNLLIASPSHKWRLRISFFPAFLNKGK--DLNALKEELLQAIAPLDRGAEATPEDQEMVDR
KAG6588812.1 putative plastid-lipid-associated protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.5e-3175.49Show/hide
Query:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSN----SIFKNTNLLIASPSHKWRLRISFFPAFLNKGKDLNALKEELLQAIAPLDRGAEATPEDQEMV
        MAMALSSST+TPT+K+SPP TSQP R LLRIPSN    +      LL A+PS KWRLRISFFPAFL KGKD+ ALKEELL+AIAPLDRGAEATPEDQEMV
Subjt:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSN----SIFKNTNLLIASPSHKWRLRISFFPAFLNKGKDLNALKEELLQAIAPLDRGAEATPEDQEMV

Query:  DR
        D+
Subjt:  DR
XP_008443741.1 PREDICTED: probable plastid-lipid-associated protein 4, chloroplastic isoform X1 [Cucumis melo]8.5e-3180Show/hide
Query:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSIFKNTNLLIASPSHKWRLRISFFPAFLNKGK--DLNALKEELLQAIAPLDRGAEATPEDQEMVDR
        MA+ALSSSTVTPT K  PPSTSQP RFL  IPSN    NTNLL +SPSHKWRLRISFFPAFLNKGK  ++ ALK+ELLQAIAPLDRGAEATPEDQEMVD+
Subjt:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSIFKNTNLLIASPSHKWRLRISFFPAFLNKGK--DLNALKEELLQAIAPLDRGAEATPEDQEMVDR
XP_022927890.1 probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita moschata]8.5e-3175.49Show/hide
Query:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSN----SIFKNTNLLIASPSHKWRLRISFFPAFLNKGKDLNALKEELLQAIAPLDRGAEATPEDQEMV
        MAMALSSST+TPT+K+SPP TSQP R LLRIPSN    +      LL A+PS KWRLRISFFPAFL KGKD+ ALKEELL+AIAPLDRGAEATPEDQEMV
Subjt:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSN----SIFKNTNLLIASPSHKWRLRISFFPAFLNKGKDLNALKEELLQAIAPLDRGAEATPEDQEMV

Query:  DR
        D+
Subjt:  DR
XP_038887592.1 probable plastid-lipid-associated protein 4, chloroplastic [Benincasa hispida]2.0e-3276.85Show/hide
Query:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSI----FKNTNLLIASPSHKWRLRISFFPAFLN------KGKDLNALKEELLQAIAPLDRGAEATP
        MAMALSSST+TPTIK+SPPSTSQ  RFLLRIPSN I      NT  L ASPSHKWR+RISFFP FLN      KGKD+ ALKEELLQAIAPLDRGAEATP
Subjt:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSI----FKNTNLLIASPSHKWRLRISFFPAFLN------KGKDLNALKEELLQAIAPLDRGAEATP

Query:  EDQEMVDR
        EDQEMVD+
Subjt:  EDQEMVDR
TrEMBL top hitse value%identityAlignment
A0A0A0M3B4 PAP_fibrillin domain-containing protein3.5e-3076Show/hide
Query:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSIFKNTNLLIASPSHKWRLRISFFPAFLNKGK--DLNALKEELLQAIAPLDRGAEATPEDQEMVDR
        MA+ALSSST TPT K+ PPSTSQP RFLL I  ++   NTNLL +SPSHKWRLRISFFPAFLNKGK  ++ ALK+ELLQAI PLDRGAEATPEDQEMVD+
Subjt:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSIFKNTNLLIASPSHKWRLRISFFPAFLNKGK--DLNALKEELLQAIAPLDRGAEATPEDQEMVDR
A0A1S3B9I8 probable plastid-lipid-associated protein 4, chloroplastic isoform X14.1e-3180Show/hide
Query:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSIFKNTNLLIASPSHKWRLRISFFPAFLNKGK--DLNALKEELLQAIAPLDRGAEATPEDQEMVDR
        MA+ALSSSTVTPT K  PPSTSQP RFL  IPSN    NTNLL +SPSHKWRLRISFFPAFLNKGK  ++ ALK+ELLQAIAPLDRGAEATPEDQEMVD+
Subjt:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSIFKNTNLLIASPSHKWRLRISFFPAFLNKGK--DLNALKEELLQAIAPLDRGAEATPEDQEMVDR
A0A5A7T9T9 Putative plastid-lipid-associated protein 44.1e-3180Show/hide
Query:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSIFKNTNLLIASPSHKWRLRISFFPAFLNKGK--DLNALKEELLQAIAPLDRGAEATPEDQEMVDR
        MA+ALSSSTVTPT K  PPSTSQP RFL  IPSN    NTNLL +SPSHKWRLRISFFPAFLNKGK  ++ ALK+ELLQAIAPLDRGAEATPEDQEMVD+
Subjt:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSIFKNTNLLIASPSHKWRLRISFFPAFLNKGK--DLNALKEELLQAIAPLDRGAEATPEDQEMVDR
A0A6J1EIS7 probable plastid-lipid-associated protein 4, chloroplastic4.1e-3175.49Show/hide
Query:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSN----SIFKNTNLLIASPSHKWRLRISFFPAFLNKGKDLNALKEELLQAIAPLDRGAEATPEDQEMV
        MAMALSSST+TPT+K+SPP TSQP R LLRIPSN    +      LL A+PS KWRLRISFFPAFL KGKD+ ALKEELL+AIAPLDRGAEATPEDQEMV
Subjt:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSN----SIFKNTNLLIASPSHKWRLRISFFPAFLNKGKDLNALKEELLQAIAPLDRGAEATPEDQEMV

Query:  DR
        D+
Subjt:  DR
A0A6J1JGL8 probable plastid-lipid-associated protein 4, chloroplastic5.9e-3073.53Show/hide
Query:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSN----SIFKNTNLLIASPSHKWRLRISFFPAFLNKGKDLNALKEELLQAIAPLDRGAEATPEDQEMV
        MAMALSSST+TPT+K+SPP  SQP R LLRIPSN    +      LL  +PS KWRLRISFFPAFL KGKD+ ALKEELL+AIAPLDRGAEATPEDQEMV
Subjt:  MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSN----SIFKNTNLLIASPSHKWRLRISFFPAFLNKGKDLNALKEELLQAIAPLDRGAEATPEDQEMV

Query:  DR
        D+
Subjt:  DR
SwissProt top hitse value%identityAlignment
Q9LU85 Probable plastid-lipid-associated protein 4, chloroplastic7.0e-0442.42Show/hide
Query:  TNLLIASPSHKWRLRI----SFFPAFL---NKGKDLNALKEELLQAIAPLDRGAEATPEDQEMVDR
        T L       + RLR+    SF PAFL    + +    LK+ELL+AI PL+RGA A+P+DQ  +D+
Subjt:  TNLLIASPSHKWRLRI----SFFPAFL---NKGKDLNALKEELLQAIAPLDRGAEATPEDQEMVDR
Arabidopsis top hitse value%identityAlignment
AT3G26070.1 Plastid-lipid associated protein PAP / fibrillin family protein5.0e-0542.42Show/hide
Query:  TNLLIASPSHKWRLRI----SFFPAFL---NKGKDLNALKEELLQAIAPLDRGAEATPEDQEMVDR
        T L       + RLR+    SF PAFL    + +    LK+ELL+AI PL+RGA A+P+DQ  +D+
Subjt:  TNLLIASPSHKWRLRI----SFFPAFL---NKGKDLNALKEELLQAIAPLDRGAEATPEDQEMVDR
AT3G26080.1 plastid-lipid associated protein PAP / fibrillin family protein1.9e-0440.85Show/hide
Query:  PSNSIFK-NTNLLIASPSHKWRLRIS---FFPAFLNKGKDLNALKEELLQAIAPLDRGAEATPEDQEMVDR
        PS+S F   T LL      + RLRI     FP      +    LK EL++AI PL+RGA A+P+DQ ++D+
Subjt:  PSNSIFK-NTNLLIASPSHKWRLRIS---FFPAFLNKGKDLNALKEELLQAIAPLDRGAEATPEDQEMVDR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGGCCTTATCCTCATCTACTGTTACTCCGACCATCAAAATTTCGCCTCCTTCAACATCCCAACCACTCAGGTTTCTCCTTCGCATTCCCTCAAACTCCATTTT
CAAGAACACTAACCTCCTCATTGCTTCACCTTCTCACAAGTGGAGGCTCAGAATCTCTTTCTTTCCTGCCTTTTTGAACAAAGGAAAAGATCTTAATGCTCTTAAAGAGG
AACTTCTTCAAGCAATTGCGCCCCTCGATCGAGGGGCTGAAGCCACTCCTGAAGATCAGGAAATGGTTGATCGGACGGATTGTGATGCTGAGTTGAGTATGCTGAGCGTG
GTGCCTTCTCATTGGGCAAGATATAAAGGAAAGGATTTCTTATTTGAATGA
mRNA sequenceShow/hide mRNA sequence
CTTTGGACAAATGGCAACCGTTTCTCTTCCGTTGCTTTCTTTGGCACACGCACTAAAGAGAAAATGGCTATGGCCTTATCCTCATCTACTGTTACTCCGACCATCAAAAT
TTCGCCTCCTTCAACATCCCAACCACTCAGGTTTCTCCTTCGCATTCCCTCAAACTCCATTTTCAAGAACACTAACCTCCTCATTGCTTCACCTTCTCACAAGTGGAGGC
TCAGAATCTCTTTCTTTCCTGCCTTTTTGAACAAAGGAAAAGATCTTAATGCTCTTAAAGAGGAACTTCTTCAAGCAATTGCGCCCCTCGATCGAGGGGCTGAAGCCACT
CCTGAAGATCAGGAAATGGTTGATCGGACGGATTGTGATGCTGAGTTGAGTATGCTGAGCGTGGTGCCTTCTCATTGGGCAAGATATAAAGGAAAGGATTTCTTATTTGA
ATGA
Protein sequenceShow/hide protein sequence
MAMALSSSTVTPTIKISPPSTSQPLRFLLRIPSNSIFKNTNLLIASPSHKWRLRISFFPAFLNKGKDLNALKEELLQAIAPLDRGAEATPEDQEMVDRTDCDAELSMLSV
VPSHWARYKGKDFLFE