; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G008580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G008580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPAP_fibrillin domain-containing protein
Genome locationchr03:14097073..14110146
RNA-Seq ExpressionLsi03G008580
SyntenyLsi03G008580
Gene Ontology termsNA
InterPro domainsIPR006843 - Plastid lipid-associated protein/fibrillin conserved domain
IPR019825 - Legume lectin, beta chain, Mn/Ca-binding site
IPR039633 - Plastid-lipid-associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RYQ82817.1 hypothetical protein Ahy_B10g101384 isoform B [Arachis hypogaea]3.5e-2989.33Show/hide
Query:  LKSIVTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        L++ VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELR+SRGDKGNLFILKM+DPSY+VPV
Subjt:  LKSIVTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

XP_011660249.1 probable plastid-lipid-associated protein 4, chloroplastic isoform X1 [Cucumis sativus]7.8e-2995.77Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VTA+L PLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSY+VPV
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

XP_015943695.1 probable plastid-lipid-associated protein 4, chloroplastic [Arachis duranensis]7.8e-2992.96Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELR+SRGDKGNLFILKM+DPSY+VPV
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

XP_023532027.1 probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita pepo subsp. pepo]4.6e-2995.77Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSY+VPV
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

XP_038887592.1 probable plastid-lipid-associated protein 4, chloroplastic [Benincasa hispida]2.1e-2997.18Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VTANL PLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSY+VPV
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

TrEMBL top hitse value%identityAlignment
A0A0A0M3B4 PAP_fibrillin domain-containing protein3.8e-2995.77Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VTA+L PLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSY+VPV
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

A0A1S4DUY7 probable plastid-lipid-associated protein 4, chloroplastic isoform X28.4e-2994.37Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VTA+L PLNSRKVAVQFDTFKILGLIPVKAPGRARGEL+ITYLDEELRISRGDKGNLFILKMIDPSY+VPV
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

A0A444WZC9 Uncharacterized protein1.7e-2989.33Show/hide
Query:  LKSIVTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        L++ VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELR+SRGDKGNLFILKM+DPSY+VPV
Subjt:  LKSIVTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

A0A6J1DS61 probable plastid-lipid-associated protein 4, chloroplastic3.8e-2995.77Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSY+VPV
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

A0A6P4C536 probable plastid-lipid-associated protein 4, chloroplastic3.8e-2992.96Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELR+SRGDKGNLFILKM+DPSY+VPV
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

SwissProt top hitse value%identityAlignment
Q0JD85 Fibrillin protein 5 homolog6.9e-0464.52Show/hide
Query:  GELEITYLDEELRISRGDKGNLFILKMIDPS
        G LEITY+DE LRI R DK N+F+L+  DPS
Subjt:  GELEITYLDEELRISRGDKGNLFILKMIDPS

Q6DBN2 Probable plastid-lipid-associated protein 5, chloroplastic3.1e-2069.44Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAP-GRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VT +L PLNS+ VAV+   FKILG IPVKAP G ARGELEITY+DEELRISRG    LFILKM DP+Y++P+
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAP-GRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

Q9LU85 Probable plastid-lipid-associated protein 4, chloroplastic2.7e-2471.83Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VT ++ PLNS+KVAV+   FKILG IP+KAP  ARGELEITY+DEELR+SRGDKGNLFILKM DP+Y++P+
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

Arabidopsis top hitse value%identityAlignment
AT3G26070.1 Plastid-lipid associated protein PAP / fibrillin family protein1.9e-2571.83Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VT ++ PLNS+KVAV+   FKILG IP+KAP  ARGELEITY+DEELR+SRGDKGNLFILKM DP+Y++P+
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

AT3G26080.1 plastid-lipid associated protein PAP / fibrillin family protein2.2e-2169.44Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAP-GRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
        VT +L PLNS+ VAV+   FKILG IPVKAP G ARGELEITY+DEELRISRG    LFILKM DP+Y++P+
Subjt:  VTANLNPLNSRKVAVQFDTFKILGLIPVKAP-GRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV

AT5G19940.1 Plastid-lipid associated protein PAP / fibrillin family protein9.3e-0437.1Show/hide
Query:  VTANLNPLNSRKVAVQFDTFKI-LGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILK
        +T  L  L+S  V V F+  +I +G +  K    +  +L ITY+DE+LR+  G KG+LF+ +
Subjt:  VTANLNPLNSRKVAVQFDTFKI-LGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCAATCAGACTTGAAGAAGAAGGCTGCCCAGTCTGGTGTGAACACAACGTCGGAACTCGAAGAGTTGCGTTTAGTGTGGAAAGAGACAGAAGATGTCGACTCGTCTTC
TGGGCCTACAGAGGTGCTTTGTTTTAATTCTCTTGGCAATAATTTTTTGAAAGATTCTCAGAACACAACTTTTGGTATTCCTCTGAAGACAAATCAATGGTCCTCTGATC
ACACCTTAATTGCTGCAAGCTCTACAAGTAATAGCACACCATTACTTGATTCCTCGAAACCGTTAGTCTTCCCCTCAAATGAAGTCTCGACCAATGAGCGTCTGCATTTG
AATGATCACATTCATTTCTTGAGAGGTACACCATGCTACCCTTCGGATTCTTCTCAAAAAAGGAAGATTGAATCAGATTTTGATTCCCCTATCAGTGTAAGCAGTGAGGA
ATCAGATGTTTTTGAGAATGGCGTGGATTATGAGGAACCAGGGCAAGAGAACAATTTTGAAGCTGACCTTAATGCTCTGTTTCAGAATATAGTTGATCTAAAGGAAAATG
AGAGAGGAGCTTCTTGTTTTTCTACATTGCATCCATCAGAAATCCCTGCCCATCTAAAGTCCATTGTCACAGCAAACTTGAATCCTTTAAATTCAAGAAAAGTAGCTGTT
CAATTTGACACATTCAAAATTCTTGGCCTGATACCGGTGAAAGCACCTGGAAGAGCCCGCGGTGAACTGGAAATTACATATTTGGATGAAGAGTTGCGAATATCCAGAGG
TGACAAAGGGAACCTCTTTATCTTGAAGATGATTGATCCTTCTTATCAAGTACCTGTGTAA
mRNA sequenceShow/hide mRNA sequence
GTTCAATCAGACTTGAAGAAGAAGGCTGCCCAGTCTGGTGTGAACACAACGTCGGAACTCGAAGAGTTGCGTTTAGTGTGGAAAGAGACAGAAGATGTCGACTCGTCTTC
TGGGCCTACAGAGGTGCTTTGTTTTAATTCTCTTGGCAATAATTTTTTGAAAGATTCTCAGAACACAACTTTTGGTATTCCTCTGAAGACAAATCAATGGTCCTCTGATC
ACACCTTAATTGCTGCAAGCTCTACAAGTAATAGCACACCATTACTTGATTCCTCGAAACCGTTAGTCTTCCCCTCAAATGAAGTCTCGACCAATGAGCGTCTGCATTTG
AATGATCACATTCATTTCTTGAGAGGTACACCATGCTACCCTTCGGATTCTTCTCAAAAAAGGAAGATTGAATCAGATTTTGATTCCCCTATCAGTGTAAGCAGTGAGGA
ATCAGATGTTTTTGAGAATGGCGTGGATTATGAGGAACCAGGGCAAGAGAACAATTTTGAAGCTGACCTTAATGCTCTGTTTCAGAATATAGTTGATCTAAAGGAAAATG
AGAGAGGAGCTTCTTGTTTTTCTACATTGCATCCATCAGAAATCCCTGCCCATCTAAAGTCCATTGTCACAGCAAACTTGAATCCTTTAAATTCAAGAAAAGTAGCTGTT
CAATTTGACACATTCAAAATTCTTGGCCTGATACCGGTGAAAGCACCTGGAAGAGCCCGCGGTGAACTGGAAATTACATATTTGGATGAAGAGTTGCGAATATCCAGAGG
TGACAAAGGGAACCTCTTTATCTTGAAGATGATTGATCCTTCTTATCAAGTACCTGTGTAACACTCTAATCTCTTTACTTTACTAGTAATATCCTTCTAAAGCCTCAAGA
AATCGCAAAACCAGAGAGTGAATATTATCTTGTAAGTTCATTCTCATAATATCTTCATAAAACTTGTGGCAACCTTTTGTATATTTTCCATATGCCAAATTATACTATGA
GAATCTCTCCATCGTGTACCCTTGAAACAATTTGTTCTCTTGTTCCTGTATTCATTCATATTTTAATGTTGCAATTTGTACGAGTGTTTACGAGAA
Protein sequenceShow/hide protein sequence
VQSDLKKKAAQSGVNTTSELEELRLVWKETEDVDSSSGPTEVLCFNSLGNNFLKDSQNTTFGIPLKTNQWSSDHTLIAASSTSNSTPLLDSSKPLVFPSNEVSTNERLHL
NDHIHFLRGTPCYPSDSSQKRKIESDFDSPISVSSEESDVFENGVDYEEPGQENNFEADLNALFQNIVDLKENERGASCFSTLHPSEIPAHLKSIVTANLNPLNSRKVAV
QFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV