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Lsi03G008780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G008780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCOP9 signalosome complex subunit 8-like
Genome locationchr03:15166224..15167644
RNA-Seq ExpressionLsi03G008780
SyntenyLsi03G008780
Gene Ontology termsGO:0000338 - protein deneddylation (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0009753 - response to jasmonic acid (biological process)
GO:0010387 - COP9 signalosome assembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008180 - COP9 signalosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033205 - COP9 signalosome, subunit CSN8
IPR033464 - CSN8/PSMD8/EIF3K


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022587.1 COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4291.21Show/hide
Query:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSGKSL
        AAAEGI++QDEWPY IHFLGY YVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAI  FDW QEV+GLLAAFSGKSL
Subjt:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSGKSL

XP_008449425.1 PREDICTED: COP9 signalosome complex subunit 8 isoform X1 [Cucumis melo]6.2e-4293.1Show/hide
Query:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS
        AAAEGIA++DEWPYAIHFLGY YVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLW RDH GVYEAIHE DWCQEVQGLLAAFS
Subjt:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS

XP_023531250.1 COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo]2.8e-4294.25Show/hide
Query:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS
        AAAEGIA+QDEWPY IHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAI  FDWCQEV+GLLAAFS
Subjt:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS

XP_031743776.1 COP9 signalosome complex subunit 8 isoform X2 [Cucumis sativus]6.2e-4290.8Show/hide
Query:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS
        AAAEGIA++DEWPYAIHFLGY YVDDINSARFLWK+IPSTIKENRPELVA+WKIGQKLW+RDH GVYEAIHE DWCQEVQGLLAAFS
Subjt:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS

XP_038888574.1 COP9 signalosome complex subunit 8 [Benincasa hispida]5.6e-4395.4Show/hide
Query:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS
        AAAEGIA+QDEWPYAIHFLGYLYVDDINSARFLWK+IPSTIKENRPEL AVWKIGQKLWIRDHGGVYEAI EFDWCQEVQGLLAAFS
Subjt:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS

TrEMBL top hitse value%identityAlignment
A0A0A0KJG9 CSN8_PSD8_EIF3K domain-containing protein1.4e-4491.21Show/hide
Query:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSGKSL
        AAAEGIA++DEWPYAIHFLGY YVDDINSARFLWK+IPSTIKENRPELVA+WKIGQKLW+RDH GVYEAIHE DWCQEVQGLLAAFSGKSL
Subjt:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSGKSL

A0A1S3BMN0 COP9 signalosome complex subunit 8 isoform X13.0e-4293.1Show/hide
Query:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS
        AAAEGIA++DEWPYAIHFLGY YVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLW RDH GVYEAIHE DWCQEVQGLLAAFS
Subjt:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS

A0A1S3BMY1 COP9 signalosome complex subunit 8 isoform X23.0e-4293.1Show/hide
Query:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS
        AAAEGIA++DEWPYAIHFLGY YVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLW RDH GVYEAIHE DWCQEVQGLLAAFS
Subjt:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS

A0A6J1EJA8 COP9 signalosome complex subunit 8-like1.3e-4090.8Show/hide
Query:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS
        AAAEGI++QDEWPY IHFLGY YVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAI  FDW QEV+GLLAAFS
Subjt:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS

A0A6J1JQ49 COP9 signalosome complex subunit 8-like6.7e-4293.1Show/hide
Query:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS
        AAAEGIA+QDEWPY IHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRD+GGVYEAI  FDWCQEV+GLLAAFS
Subjt:  AAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS

SwissProt top hitse value%identityAlignment
P43255 COP9 signalosome complex subunit 85.1e-3165.12Show/hide
Query:  AAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS
        A+EGI + D+WPYAIH LGY YVDD +SARFLWK IP+ IKE +PE+VA W IGQKLW  D+ GVYEAI  +DW QE + ++AAFS
Subjt:  AAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS

Q6GQA6 COP9 signalosome complex subunit 85.7e-1444.62Show/hide
Query:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAA
        YL  +D+N+AR+LWK IPS IK +  EL  +W++GQK+W RD  G+Y +I  + W + +Q ++ A
Subjt:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAA

Q6P4Z9 COP9 signalosome complex subunit 83.1e-1243.08Show/hide
Query:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAA
        YL  +D+N+AR+LWK IP  IK    EL  +W +GQ++W RD  G+Y  I+   W + VQ ++ A
Subjt:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAA

Q7ZUZ0 COP9 signalosome complex subunit 82.8e-1343.08Show/hide
Query:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAA
        YL  +D+N+AR+LWK IP  IK   PE+ A+W +GQ++W RD  G+Y AI  + W + +  ++ A
Subjt:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAA

Q8VBV7 COP9 signalosome complex subunit 83.1e-1243.08Show/hide
Query:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAA
        YL  +D+N+AR+LWK IP  IK    EL  +W +GQ++W RD  G+Y  I+   W + VQ ++ A
Subjt:  YLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAA

Arabidopsis top hitse value%identityAlignment
AT4G14110.1 COP9 signalosome, subunit CSN83.7e-3265.12Show/hide
Query:  AAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS
        A+EGI + D+WPYAIH LGY YVDD +SARFLWK IP+ IKE +PE+VA W IGQKLW  D+ GVYEAI  +DW QE + ++AAFS
Subjt:  AAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCAAATGATGCTGCAGCCGAGGGCATTGCTTTTCAGGATGAATGGCCTTACGCGATCCATTTTCTTGGCTACCTTTACGTTGATGACATCAATAGTGCTCGATT
TCTCTGGAAAGCAATACCTTCCACTATTAAAGAAAACCGGCCAGAACTGGTTGCCGTTTGGAAAATTGGCCAAAAGTTATGGATTCGGGACCATGGGGGTGTATATGAGG
CTATTCATGAATTTGATTGGTGTCAAGAAGTTCAAGGCCTATTAGCTGCATTTTCAGGCAAGTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATCAAATGATGCTGCAGCCGAGGGCATTGCTTTTCAGGATGAATGGCCTTACGCGATCCATTTTCTTGGCTACCTTTACGTTGATGACATCAATAGTGCTCGATT
TCTCTGGAAAGCAATACCTTCCACTATTAAAGAAAACCGGCCAGAACTGGTTGCCGTTTGGAAAATTGGCCAAAAGTTATGGATTCGGGACCATGGGGGTGTATATGAGG
CTATTCATGAATTTGATTGGTGTCAAGAAGTTCAAGGCCTATTAGCTGCATTTTCAGGCAAGTCTCTTTGA
Protein sequenceShow/hide protein sequence
MLSNDAAAEGIAFQDEWPYAIHFLGYLYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIHEFDWCQEVQGLLAAFSGKSL