; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G008880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G008880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr03:15813068..15831669
RNA-Seq ExpressionLsi03G008880
SyntenyLsi03G008880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.3e-3553.1Show/hide
Query:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY
        +GGI VAW +VCLP  E  LGI    SWNI   LK LW++L  SGSLWVAWME Y+LKG+SLW +    G  W  +AIL+ R+ L   V + V NG    
Subjt:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY

Query:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP
        VW DPWL  G I  +  ERV+YDA S  EARLSDF+  +G W WP
Subjt:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]1.9e-3955.86Show/hide
Query:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY
        +GGI VAW +VCLP  E  LGI    SWNI + LK LW++L  SGSLWVAW+E Y+LKGRSLW +    G  W L+AIL+ R+ L  LV + V NG  + 
Subjt:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY

Query:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP
        VW DPWLPEG I  +  ERV+YDA S  +ARLSDF+  DG W WP
Subjt:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]2.2e-1134.72Show/hide
Query:  LSELKNLKVLKPVLRGLISRHISVLGDAIRVAKERMDRAQAEVKANSLSKILG---------------------VEKSRVRWLELGDQNSTFFHWCVHSR
        +S ++NL  LKP++R    RHI  L + +R AK  +D AQ EV+ N +S +L                       +KSR+RWL+LGDQN+ FFH  V SR
Subjt:  LSELKNLKVLKPVLRGLISRHISVLGDAIRVAKERMDRAQAEVKANSLSKILG---------------------VEKSRVRWLELGDQNSTFFHWCVHSR

Query:  QWRKELISVVDSSRARHSSYEGIAAAAVEFGNQGGILVAWDEVC
          R  L S+VDS   R   Y  ++    +      +   W E C
Subjt:  QWRKELISVVDSSRARHSSYEGIAAAAVEFGNQGGILVAWDEVC

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]2.1e-3850.83Show/hide
Query:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY
        +G   VAWDEVCLP  E  L I    SWNI + LK LW+LLV+SGSLWVAW+E Y+LKGRSLW I  G G  W  + IL+ +D+L   V + V NGR Y 
Subjt:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY

Query:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWPCCVYGRAVWGGILGLLGSTHRVAGWRLSWSMVIRSV
        VW  PW+  GPI  ++ ERVIYDA S  +ARL DF+  DG W WP  VY        L L+    RV G R S S+  R V
Subjt:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWPCCVYGRAVWGGILGLLGSTHRVAGWRLSWSMVIRSV

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.3e-3553.1Show/hide
Query:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY
        +GGI VAW +VCLP  E  LGI    SWNI   LK LW++L  SGSLWVAWME Y+LKG+SLW +    G  W  +AIL+ R+ L   V + V NG    
Subjt:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY

Query:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP
        VW DPWL  G I  +  ERV+YDA S  EARLSDF+  +G W WP
Subjt:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP

XP_038885895.1 uncharacterized protein LOC120076201 [Benincasa hispida]1.1e-3951.9Show/hide
Query:  GNQGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRG
        G+ GG  VAWDEVCL K E +LG+     WN   I+K LW+LLV+ GSLWVAWME Y+L+GRSLW+IR   G  W L+AIL CR+    LV L+V +GR 
Subjt:  GNQGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRG

Query:  YYVWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWPCCVYG-RAVWG
         +VW DPWLPEG I  +Y   V+ DA S L+ RLS+F+  +G W WP   +    +WG
Subjt:  YYVWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWPCCVYG-RAVWG

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein6.2e-3653.1Show/hide
Query:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY
        +GGI VAW +VCLP  E  LGI    SWNI   LK LW++L  SGSLWVAWME Y+LKG+SLW +    G  W  +AIL+ R+ L   V + V NG    
Subjt:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY

Query:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP
        VW DPWL  G I  +  ERV+YDA S  EARLSDF+  +G W WP
Subjt:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP

A0A5A7UV01 F17F8.52.9e-3351.72Show/hide
Query:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY
        +GGI VAW +VCLP  E  LGI    SWNI + LK L ++L  SGSLWVAW++ Y+LKGRSLW +    G  W L+AIL+ R+ L  LV + V N     
Subjt:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY

Query:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP
        VW D WL    I  +  ERV+YDA S  EARLSDF+  DG W WP
Subjt:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP

A0A5A7UV01 F17F8.51.8e-0656.36Show/hide
Query:  EKSRVRWLELGDQNSTFFHWCVHSRQWRKELISVVDSSRARHSSYEGIAAAAVEF
        +KSR+RWL+LGDQN+TFFH  V SR  R  L S+VDS   R SS++G+A  AV +
Subjt:  EKSRVRWLELGDQNSTFFHWCVHSRQWRKELISVVDSSRARHSSYEGIAAAAVEF

A0A5A7UV01 F17F8.56.4e-3333.04Show/hide
Query:  LSELKNLKVLKPVLRGLISRHISVLGDAIRVAKERMDRAQAEVKANSLSKILGVEKSRVRWLELGDQNSTFFHW---CVHSRQ---WRKELISV---VDS
        +S ++NL  LKP+LR    RHI  L + + +AKE MD AQ E+  N  S  +G ++   R L     +   F W   C  + Q    R+E+ SV   +DS
Subjt:  LSELKNLKVLKPVLRGLISRHISVLGDAIRVAKERMDRAQAEVKANSLSKILGVEKSRVRWLELGDQNSTFFHW---CVHSRQ---WRKELISV---VDS

Query:  SRA------------------------------------------------RHSSYEGI----------AAAAVEFGNQ--------GGILVAWDEV-CL
         +A                                                +H+  E +          +A  + F  +          + V W  V  L
Subjt:  SRA------------------------------------------------RHSSYEGI----------AAAAVEFGNQ--------GGILVAWDEV-CL

Query:  P----KVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYYVWRDPWLPE
        P      E  LGI    +WNI + LK LW++L   GSLWVAW+E Y+LKGRSLW +    G  W L+AIL+ R+ L   V + V NG    VW DPWL  
Subjt:  P----KVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYYVWRDPWLPE

Query:  GPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP
        G I  +  ERV+YDA S  EA LSDF+  DG W WP
Subjt:  GPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP

A0A5A7V3Z0 Reverse transcriptase domain-containing protein9.2e-4055.86Show/hide
Query:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY
        +GGI VAW +VCLP  E  LGI    SWNI + LK LW++L  SGSLWVAW+E Y+LKGRSLW +    G  W L+AIL+ R+ L  LV + V NG  + 
Subjt:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY

Query:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP
        VW DPWLPEG I  +  ERV+YDA S  +ARLSDF+  DG W WP
Subjt:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP

A0A5A7V3Z0 Reverse transcriptase domain-containing protein1.1e-1134.72Show/hide
Query:  LSELKNLKVLKPVLRGLISRHISVLGDAIRVAKERMDRAQAEVKANSLSKILG---------------------VEKSRVRWLELGDQNSTFFHWCVHSR
        +S ++NL  LKP++R    RHI  L + +R AK  +D AQ EV+ N +S +L                       +KSR+RWL+LGDQN+ FFH  V SR
Subjt:  LSELKNLKVLKPVLRGLISRHISVLGDAIRVAKERMDRAQAEVKANSLSKILG---------------------VEKSRVRWLELGDQNSTFFHWCVHSR

Query:  QWRKELISVVDSSRARHSSYEGIAAAAVEFGNQGGILVAWDEVC
          R  L S+VDS   R   Y  ++    +      +   W E C
Subjt:  QWRKELISVVDSSRARHSSYEGIAAAAVEFGNQGGILVAWDEVC

A0A5A7V3Z0 Reverse transcriptase domain-containing protein6.2e-3653.1Show/hide
Query:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY
        +GGI VAW +VCLP  E  LGI    SWNI   LK LW++L  SGSLWVAWME Y+LKG+SLW +    G  W  +AIL+ R+ L   V + V NG    
Subjt:  QGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYLQAILQCRDLLLPLVHLLVRNGRGYY

Query:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP
        VW DPWL  G I  +  ERV+YDA S  EARLSDF+  +G W WP
Subjt:  VWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGATTTTAATGCTATTCGTGATTCGTCGGAAGCCTTTAGGGGAAGTCGCAGTGATAATGATATAGAGGAGTTTGATAGGGCTATTTTGGAAGCTGATCTGTCTGA
GTTGAAAAATTTGAAGGTACTTAAGCCTGTTTTGAGGGGTTTGATTAGCAGACATATCTCTGTCTTAGGGGATGCTATTAGGGTGGCTAAGGAGAGAATGGATAGGGCTC
AAGCGGAGGTTAAGGCCAATTCGTTGTCGAAGATATTGGGGGTGGAGAAGTCTCGTGTTCGGTGGTTGGAGTTGGGTGATCAGAATTCAACCTTCTTTCATTGGTGTGTG
CATTCGCGGCAGTGGAGGAAGGAGTTGATTTCGGTGGTTGATAGTAGTAGGGCTCGTCATTCCTCTTATGAGGGTATTGCAGCAGCTGCTGTGGAGTTTGGGAACCAGGG
TGGCATCCTGGTGGCTTGGGATGAGGTGTGCTTGCCCAAGGTTGAGGAGGACCTGGGTATTCACCGATCTGGTTCTTGGAATATAGTTACTATTTTGAAGTTTCTTTGGG
TACTCTTGGTGAGATCGGGTTCGTTATGGGTGGCTTGGATGGAGGACTATATGCTGAAGGGTCGTTCCCTTTGGTCGATTAGGGTGGGTGCTGGGATGTTTTGGTATTTG
CAGGCCATTCTTCAGTGTCGTGATCTTTTGTTGCCTTTGGTGCATTTGTTGGTGAGGAATGGTAGGGGTTATTATGTGTGGCGGGATCCTTGGTTACCAGAGGGCCCTAT
TTTTCCTCGCTATGTTGAGAGGGTGATATATGATGCTACTAGTGGGTTGGAGGCTCGTCTTTCTGATTTCTTGTCGGAGGATGGGTCTTGGTGGTGGCCTTGTTGTGTTT
ATGGACGTGCGGTATGGGGTGGGATCTTGGGCCTGTTGGGGTCTACCCATCGTGTGGCGGGTTGGAGGTTGAGTTGGAGTATGGTCATTCGCTCTGTTGTTCGTGCTCGT
GCTGCTTCAAGACCGGATGATCTTCTAGTCAAATTCATATGTGATCCTTCCCCTTATGATTTCTATTGTTGTCTGTGCGCTGCCCCGAGCTGTGGGGTTTTGCCTTGTTG
CTACTTTGCCCTGGGCATTGCTCTGGTTGCTCTTGGTGAGATCGGGTTCATTACGGGTGGCTTGGATGGAGGAGTATATGCTGAAGGGTCGATCGCTCTAAGAATATCCA
ATGTTGACAAATTTTAT
mRNA sequenceShow/hide mRNA sequence
GGCCTGGTGTTGTGATGGGTGATTTTAATGCTATTCGTGATTCGTCGGAAGCCTTTAGGGGAAGTCGCAGTGATAATGATATAGAGGAGTTTGATAGGGCTATTTTGGAA
GCTGATCTGTCTGAGTTGAAAAATTTGAAGGTACTTAAGCCTGTTTTGAGGGGTTTGATTAGCAGACATATCTCTGTCTTAGGGGATGCTATTAGGGTGGCTAAGGAGAG
AATGGATAGGGCTCAAGCGGAGGTTAAGGCCAATTCGTTGTCGAAGATATTGGGGGTGGAGAAGTCTCGTGTTCGGTGGTTGGAGTTGGGTGATCAGAATTCAACCTTCT
TTCATTGGTGTGTGCATTCGCGGCAGTGGAGGAAGGAGTTGATTTCGGTGGTTGATAGTAGTAGGGCTCGTCATTCCTCTTATGAGGGTATTGCAGCAGCTGCTGTGGAG
TTTGGGAACCAGGGTGGCATCCTGGTGGCTTGGGATGAGGTGTGCTTGCCCAAGGTTGAGGAGGACCTGGGTATTCACCGATCTGGTTCTTGGAATATAGTTACTATTTT
GAAGTTTCTTTGGGTACTCTTGGTGAGATCGGGTTCGTTATGGGTGGCTTGGATGGAGGACTATATGCTGAAGGGTCGTTCCCTTTGGTCGATTAGGGTGGGTGCTGGGA
TGTTTTGGTATTTGCAGGCCATTCTTCAGTGTCGTGATCTTTTGTTGCCTTTGGTGCATTTGTTGGTGAGGAATGGTAGGGGTTATTATGTGTGGCGGGATCCTTGGTTA
CCAGAGGGCCCTATTTTTCCTCGCTATGTTGAGAGGGTGATATATGATGCTACTAGTGGGTTGGAGGCTCGTCTTTCTGATTTCTTGTCGGAGGATGGGTCTTGGTGGTG
GCCTTGTTGTGTTTATGGACGTGCGGTATGGGGTGGGATCTTGGGCCTGTTGGGGTCTACCCATCGTGTGGCGGGTTGGAGGTTGAGTTGGAGTATGGTCATTCGCTCTG
TTGTTCGTGCTCGTGCTGCTTCAAGACCGGATGATCTTCTAGTCAAATTCATATGTGATCCTTCCCCTTATGATTTCTATTGTTGTCTGTGCGCTGCCCCGAGCTGTGGG
GTTTTGCCTTGTTGCTACTTTGCCCTGGGCATTGCTCTGGTTGCTCTTGGTGAGATCGGGTTCATTACGGGTGGCTTGGATGGAGGAGTATATGCTGAAGGGTCGATCGC
TCTAAGAATATCCAATGTTGACAAATTTTAT
Protein sequenceShow/hide protein sequence
MGDFNAIRDSSEAFRGSRSDNDIEEFDRAILEADLSELKNLKVLKPVLRGLISRHISVLGDAIRVAKERMDRAQAEVKANSLSKILGVEKSRVRWLELGDQNSTFFHWCV
HSRQWRKELISVVDSSRARHSSYEGIAAAAVEFGNQGGILVAWDEVCLPKVEEDLGIHRSGSWNIVTILKFLWVLLVRSGSLWVAWMEDYMLKGRSLWSIRVGAGMFWYL
QAILQCRDLLLPLVHLLVRNGRGYYVWRDPWLPEGPIFPRYVERVIYDATSGLEARLSDFLSEDGSWWWPCCVYGRAVWGGILGLLGSTHRVAGWRLSWSMVIRSVVRAR
AASRPDDLLVKFICDPSPYDFYCCLCAAPSCGVLPCCYFALGIALVALGEIGFITGGLDGGVYAEGSIALRISNVDKFY