; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G009070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G009070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationchr03:16712300..16715394
RNA-Seq ExpressionLsi03G009070
SyntenyLsi03G009070
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049805.1 polygalacturonase-like [Cucumis melo var. makuwa]4.5e-7062.5Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        ++HIVVNQC NVKMQGLKVSA GNS NT+GIHVG SSHVTILN+NI TGDDC+SIGPG+ NLWIENI CGPGHGISIGSL K  KE  V+NVTVKSC+FM
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
        +TQNG                                                SG+ +S+V Y DI GTS T VA+KFDCSPKFPCKGI+LEDVKL+YKN
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVGLVQPMGCF
        QVAKASCSNAQG +VG+VQPMGCF
Subjt:  QVAKASCSNAQGFDVGLVQPMGCF

XP_008448091.1 PREDICTED: polygalacturonase-like [Cucumis melo]4.5e-7062.5Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        ++HIVVNQC NVKMQGLKVSA GNS NT+GIHVG SSHVTILN+NI TGDDC+SIGPG+ NLWIENI CGPGHGISIGSL K  KE  V+NVTVKSC+FM
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
        +TQNG                                                SG+ +S+V Y DI GTS T VA+KFDCSPKFPCKGI+LEDVKL+YKN
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVGLVQPMGCF
        QVAKASCSNAQG +VG+VQPMGCF
Subjt:  QVAKASCSNAQGFDVGLVQPMGCF

XP_023511587.1 polygalacturonase-like [Cucurbita pepo subsp. pepo]4.8e-6460.19Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        +FHIVVN+CH+VKM+GLKVSA GNS NT+GIHVG SSHVTILNS+I TGDDC+SIGPGT NLWIEN+ CGPGHGISIGSLGK  KED V+NVTVKSCRFM
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
        NTQNG                                                SGIK+S+VTY+DIHGT+ T+ A+ FDCSPKFPC GIRLEDVKL+YKN
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVG
          AKA CS+ +G   G
Subjt:  QVAKASCSNAQGFDVG

XP_031745066.1 polygalacturonase [Cucumis sativus]1.6e-7264.29Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        +FHIVVNQC NVKMQGLKV A  NS NT+GIHVG SSHVTILNSNI TGDDC+SIGPG+ NLWIEN+VCGPGHGISIGSLGK  KE  V+NVTVKSC+FM
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
        +TQNG                                                SG+ +S+V Y++IHGTS T VA+KFDCSPKFPCKGI+LEDVKL+YKN
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVGLVQPMGCF
        QVAKASCSNAQGFDVGLVQPMGCF
Subjt:  QVAKASCSNAQGFDVGLVQPMGCF

XP_038888717.1 polygalacturonase-like [Benincasa hispida]2.5e-7365.62Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        +FHIVVNQCHNVKM GLKVSA  NS NT+GIH+GGSS+VTI NS IGTGDDC+SIGPGT NLWIENI CGPGHGISIGSLGK  KE+ VENVTVKSC F+
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
        NTQNG                                                SGIKIS+VTYEDIHGTS T V +KFDCSPK+PCKGIRLEDVKL+YKN
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVGLVQPMGCF
        QVAKASCSNAQG DVGLV  MGCF
Subjt:  QVAKASCSNAQGFDVGLVQPMGCF

TrEMBL top hitse value%identityAlignment
A0A0A0K6Z5 Uncharacterized protein8.0e-7364.29Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        +FHIVVNQC NVKMQGLKV A  NS NT+GIHVG SSHVTILNSNI TGDDC+SIGPG+ NLWIEN+VCGPGHGISIGSLGK  KE  V+NVTVKSC+FM
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
        +TQNG                                                SG+ +S+V Y++IHGTS T VA+KFDCSPKFPCKGI+LEDVKL+YKN
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVGLVQPMGCF
        QVAKASCSNAQGFDVGLVQPMGCF
Subjt:  QVAKASCSNAQGFDVGLVQPMGCF

A0A1S3BJI1 polygalacturonase-like2.2e-7062.5Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        ++HIVVNQC NVKMQGLKVSA GNS NT+GIHVG SSHVTILN+NI TGDDC+SIGPG+ NLWIENI CGPGHGISIGSL K  KE  V+NVTVKSC+FM
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
        +TQNG                                                SG+ +S+V Y DI GTS T VA+KFDCSPKFPCKGI+LEDVKL+YKN
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVGLVQPMGCF
        QVAKASCSNAQG +VG+VQPMGCF
Subjt:  QVAKASCSNAQGFDVGLVQPMGCF

A0A5A7U863 Polygalacturonase-like2.2e-7062.5Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        ++HIVVNQC NVKMQGLKVSA GNS NT+GIHVG SSHVTILN+NI TGDDC+SIGPG+ NLWIENI CGPGHGISIGSL K  KE  V+NVTVKSC+FM
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
        +TQNG                                                SG+ +S+V Y DI GTS T VA+KFDCSPKFPCKGI+LEDVKL+YKN
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVGLVQPMGCF
        QVAKASCSNAQG +VG+VQPMGCF
Subjt:  QVAKASCSNAQGFDVGLVQPMGCF

A0A6J1GNK7 polygalacturonase-like5.2e-6460.19Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        +FHIVVN+CHNVKM+GLKVSA GNS NT+GIHVG SSHVTILNS+I TGDDC+SIGPGT NLWIEN+ CGPGHGISIGSLGK  KED V+NVTVKSCRFM
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
        NTQNG                                                SGIK+S+VTY+DI GT+ T+ AM FDCSPKFPC GI+LEDVKL+YKN
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVG
          AKA CS+ +G   G
Subjt:  QVAKASCSNAQGFDVG

A0A6J1I9T6 polygalacturonase-like1.2e-6360.19Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        +FHIVVN+CHNVKM+GLKVSA GNS NT+GIHVG SSHVTILNS+I TGDDC+SIGPGT NLWIEN+ CGPGHGISIGSLGK  KED V+NVTVKSCRF 
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
        NTQNG                                                SGIK+S+VTY+DI GT+ T+ AM FDCSPKFPC GIRLEDVKL+YKN
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVG
          AKA CS+ +G   G
Subjt:  QVAKASCSNAQGFDVG

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438603.0e-4546.67Show/hide
Query:  FHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFMN
        FHIV++  +NV + G+KVSA  NS NT+GIHV  S  V I NS IGTGDDC+SIGPG+ N++I+ I CGPGHGISIGSLG+  +E  V+NVTV +  FM 
Subjt:  FHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFMN

Query:  TQNG----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQV
        T NG                                               SG+K+SNV YEDIHGTSNT+VA+  DCS + PC GI ++DV L   ++ 
Subjt:  TQNG----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQV

Query:  AKASCSNAQG
        A+ASC NA G
Subjt:  AKASCSNAQG

P35338 Exopolygalacturonase8.3e-3535.84Show/hide
Query:  FHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFMN
        FH+ + QC N+ ++ + V+APG+S NT+GIH+G SS +TI N+ IG GDDC+SIGPGT  + I  + CGPGHGISIGSLG+   E  V ++ VK C    
Subjt:  FHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFMN

Query:  TQ------------------------------------------------NGGSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYK-
        T                                                 NG S + + +VT+++I GTS+T  A+   C+ K PC G  ++DV + Y  
Subjt:  TQ------------------------------------------------NGGSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYK-

Query:  -NQVAKASCSNAQGFDVGLVQPMGCF
         N    A C+NA+G   G ++ + CF
Subjt:  -NQVAKASCSNAQGFDVGLVQPMGCF

P48979 Polygalacturonase2.6e-6055.16Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        MFHIV+N   NV+MQG++VS  GNS NT+GIHV  SS VTILNS I TGDDCVSIGPGT NLWIE + CGPGHGISIGSLGK  +E  V+NVTVK+  F 
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
         TQNG                                                SG++IS+VTYEDIHGTS T+VA+KFDCSPK PC+ I+LEDVKLTYKN
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVGLVQPMGC
        Q A++SCS+A G   G+VQP  C
Subjt:  QVAKASCSNAQGFDVGLVQPMGC

P49063 Exopolygalacturonase clone GBGA4831.7e-3537.78Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        +FH+ +  C N+ +  + + AP  SLNT+GIH+G S+ V ++ + I TGDDCVSIG GT NL +EN+ CGPGHGISIGSLG+ P E  V+ VTV+ C   
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTY--
        NT NG                                                S +K+S+VT + I GTS T+VA+K  CS   PC  I L D+ L +  
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTY--

Query:  KNQVAKASCSNAQGFDVGLVQPMGC
        K   A ++CSN +    G + P  C
Subjt:  KNQVAKASCSNAQGFDVGLVQPMGC

Q39766 Polygalacturonase4.9e-3535.71Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        +FHI V  C N+ ++ LK+ AP  S NT+GIH+G S  V I+ S+I TGDDC+SIG GT N+ I+ I CGPGHGISIGSLGK   E+ VE + + +C   
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNGG-----------------------------------------------SGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
        NT NG                                                S +K+SN+++++I GTS    A+KF CS   PC+ + L D+ + +  
Subjt:  NTQNGG-----------------------------------------------SGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  -QVAKASCSNAQGFDVGLVQPMGC
         + A + C N +   +G + P+ C
Subjt:  -QVAKASCSNAQGFDVGLVQPMGC

Arabidopsis top hitse value%identityAlignment
AT1G65570.1 Pectin lyase-like superfamily protein5.7e-4742.15Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        +FHI +N+C N+K++ +++ AP  S NT+GIH+  S+ + + N++I TGDDC+SIGPGT NL ++ I CGPGHGISIGSL K  +E  VENVTVK+  F+
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
         T NG                                                SGIKI++V Y  I GTS T++A+K DCS K PC GIR++ + LT   
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVGLVQPMGC
        + AK SC+N  G  +GLV P GC
Subjt:  QVAKASCSNAQGFDVGLVQPMGC

AT2G43860.1 Pectin lyase-like superfamily protein2.2e-4646.67Show/hide
Query:  FHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFMN
        FHIV++  +NV + G+KVSA  NS NT+GIHV  S  V I NS IGTGDDC+SIGPG+ N++I+ I CGPGHGISIGSLG+  +E  V+NVTV +  FM 
Subjt:  FHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFMN

Query:  TQNG----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQV
        T NG                                               SG+K+SNV YEDIHGTSNT+VA+  DCS + PC GI ++DV L   ++ 
Subjt:  TQNG----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQV

Query:  AKASCSNAQG
        A+ASC NA G
Subjt:  AKASCSNAQG

AT2G43870.1 Pectin lyase-like superfamily protein1.5e-5551.14Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        MFH+V+N C+NVK+QG+KV A GNS NT+GIHV  SS V+I N+ I TGDDCVSIGPGT  LWIEN+ CGPGHGISIGSLGK   E  V+NVTVK+  F 
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQ
         T NG                                               SGIKIS+V + DIHGTS T+V +K DCS K PC GIRLEDVKLTY+N+
Subjt:  NTQNG----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQ

Query:  VAKASCSNAQGFDVGLVQP
         A ++C++A G + G  QP
Subjt:  VAKASCSNAQGFDVGLVQP

AT2G43890.1 Pectin lyase-like superfamily protein2.6e-4440.72Show/hide
Query:  HIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFMNT
        H+V+N C+NV ++ +K+ AP  S NT+G+HV GS+ VT+ +    TGDDC+SIGPGT NL++  + CGPGHGISIGSLG+   E  VEN+T+ +  F  +
Subjt:  HIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFMNT

Query:  QNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQV
         NG                                               GSG+KIS V Y +I GTS TQ A+ FDCS   PC+ IRL D+KLT+  + 
Subjt:  QNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQV

Query:  AKASCSNAQGFDVGLVQPMGC
        A ++C N +G   G+V P GC
Subjt:  AKASCSNAQGFDVGLVQPMGC

AT3G59850.1 Pectin lyase-like superfamily protein7.4e-5549.78Show/hide
Query:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM
        MFH+ +N C NVK+ G+KVSA GNS NT+GIHV  SS V+ILNS I TGDDCVSIGPGT  LWIEN+ CGPGHGISIGSLGK   E  V+N+TVK+  F 
Subjt:  MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFM

Query:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN
         T+NG                                                SGIKIS+V + DIHGTS T+V +K DCS K PC GIR++DVKLTY+N
Subjt:  NTQNG-----------------------------------------------GSGIKISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKN

Query:  QVAKASCSNAQGFDVGLVQPMGC
        + A   CS+A G + G  +P  C
Subjt:  QVAKASCSNAQGFDVGLVQPMGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCACATAGTAGTAAACCAATGTCATAATGTAAAAATGCAAGGACTAAAGGTCTCGGCCCCTGGCAATAGCCTGAACACCAATGGAATTCACGTAGGCGGATCATC
TCATGTCACCATCCTTAACTCCAATATCGGCACCGGTGACGACTGCGTCTCAATAGGCCCTGGCACTTTGAACTTATGGATTGAGAATATTGTTTGTGGACCTGGCCATG
GAATTAGCATTGGGAGTTTAGGAAAAGGGCCGAAGGAGGACAGCGTTGAGAACGTGACAGTAAAATCATGTAGATTTATGAACACTCAAAATGGGGGTTCTGGAATTAAA
ATTAGCAATGTGACATATGAAGACATTCACGGGACATCGAACACGCAAGTGGCCATGAAATTCGATTGTAGCCCAAAATTTCCATGCAAAGGAATAAGGTTGGAGGATGT
TAAGCTTACTTACAAGAATCAAGTAGCCAAAGCTTCATGTAGTAATGCTCAAGGATTTGATGTTGGCTTGGTTCAGCCTATGGGTTGCTTTTAG
mRNA sequenceShow/hide mRNA sequence
CATACAAATCTCTCCGCATTCTAAAACACTTTATTTGCAAGAAATGGCTCTTCATACAAATTCATTTTTTCTCTTGCTACTACTACTACCCATTATGACCTTCTTCAATT
TACCTACCTTTGCTGCTCCGTTAACATTCAACGTTGTCAATTTTGGAGCCAAACCCAACAACCCCAAAATCGACTCATCGAAGGCCTTCCAATTGGCATGGATGCGTGCT
TGCTACACCAACATCCATTTATGTGCCTAACGCCAAATTCTACGTTAACAGTGCAACTTTTAATGGGCCATGCAATAATAATGCCATTACTATACGTATTGATGGTACTC
TCGTGGCTCCCTCGAACTTCCATCTCACTAGCAACTCTGAAAATTGGATCATTTTTCACAATATTAATGGAGTTGTTGTCTTGGGTGGCGTTATTGATGGCCGAGGATCT
GGGCTTTGGACCTGCAAAAACTCTGGCAAGACCTGTCCTCATGAAGCAACGTCACTAAAATTTACCAATTCCCAACACATATTGGTTAGTGGATTAACTTCACTGAATAG
CCAAATGTTTCACATAGTAGTAAACCAATGTCATAATGTAAAAATGCAAGGACTAAAGGTCTCGGCCCCTGGCAATAGCCTGAACACCAATGGAATTCACGTAGGCGGAT
CATCTCATGTCACCATCCTTAACTCCAATATCGGCACCGGTGACGACTGCGTCTCAATAGGCCCTGGCACTTTGAACTTATGGATTGAGAATATTGTTTGTGGACCTGGC
CATGGAATTAGCATTGGGAGTTTAGGAAAAGGGCCGAAGGAGGACAGCGTTGAGAACGTGACAGTAAAATCATGTAGATTTATGAACACTCAAAATGGGGGTTCTGGAAT
TAAAATTAGCAATGTGACATATGAAGACATTCACGGGACATCGAACACGCAAGTGGCCATGAAATTCGATTGTAGCCCAAAATTTCCATGCAAAGGAATAAGGTTGGAGG
ATGTTAAGCTTACTTACAAGAATCAAGTAGCCAAAGCTTCATGTAGTAATGCTCAAGGATTTGATGTTGGCTTGGTTCAGCCTATGGGTTGCTTTTAG
Protein sequenceShow/hide protein sequence
MFHIVVNQCHNVKMQGLKVSAPGNSLNTNGIHVGGSSHVTILNSNIGTGDDCVSIGPGTLNLWIENIVCGPGHGISIGSLGKGPKEDSVENVTVKSCRFMNTQNGGSGIK
ISNVTYEDIHGTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF