; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G009080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G009080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationchr03:16731797..16734307
RNA-Seq ExpressionLsi03G009080
SyntenyLsi03G009080
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049805.1 polygalacturonase-like [Cucumis melo var. makuwa]4.9e-11157.37Show/hide
Query:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF
        M F NL  F TPLTFNVV+FG KPNN + DSSKA QLAWM AC+S+ P +IYVP  KFYV SATFNGPC NN ITIRIDG L+APSDFHLTSNSENWI+F
Subjt:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF

Query:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS
        HN+NGV VLGG++DG+G+ LWACKNS  TCP G T                                       VSA GNSPNTDGIHVG SSHVTILN+
Subjt:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS

Query:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------
        NI TGDDCISIGPG+SNLWIENI CGPGHGISIGSL K  KE GV+NVT                                                   
Subjt:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------

Query:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF
                 S + VS+V Y DI  TS T VA+KFDCSPKFPCKGI+LEDVKL+YKNQVAKASCSNAQG +VG+VQPMGCF
Subjt:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF

XP_008448091.1 PREDICTED: polygalacturonase-like [Cucumis melo]4.9e-11157.37Show/hide
Query:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF
        M F NL  F TPLTFNVV+FG KPNN + DSSKA QLAWM AC+S+ P +IYVP  KFYV SATFNGPC NN ITIRIDG L+APSDFHLTSNSENWI+F
Subjt:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF

Query:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS
        HN+NGV VLGG++DG+G+ LWACKNS  TCP G T                                       VSA GNSPNTDGIHVG SSHVTILN+
Subjt:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS

Query:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------
        NI TGDDCISIGPG+SNLWIENI CGPGHGISIGSL K  KE GV+NVT                                                   
Subjt:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------

Query:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF
                 S + VS+V Y DI  TS T VA+KFDCSPKFPCKGI+LEDVKL+YKNQVAKASCSNAQG +VG+VQPMGCF
Subjt:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF

XP_023511587.1 polygalacturonase-like [Cucurbita pepo subsp. pepo]3.4e-9653.78Show/hide
Query:  FFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHN
        FFN P FA   TFNVVNFGAKP + K DSSKAFQ AW  ACTS+T  SIY+PN +FY+  ATFNGPC N+AI I IDGTLVAPSDFH+ +NS NWIIFH 
Subjt:  FFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHN

Query:  INGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNI
        +NGV++ GG +DG+G+GLWACK + KTCP GAT                                       VSA GNSPNTDGIHVG SSHVTILNS+I
Subjt:  INGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNI

Query:  GTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT-----------------------------------------------------
         TGDDCISIGPGTSNLWIEN+ CGPGHGISIGSLGK  KEDGV+NVT                                                     
Subjt:  GTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT-----------------------------------------------------

Query:  ------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVG
               S IKVS+VTY+DIH T+ T+ A+ FDCSPKFPC GIRLEDVKL+YKN  AKA CS+ +G   G
Subjt:  ------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVG

XP_031745066.1 polygalacturonase [Cucumis sativus]3.1e-11358.42Show/hide
Query:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF
        M F NL  FATPLTFNV++FG KPNN + DSSKA QLAWM AC+S+ P +IYVP  KFYV SATFNGPC NN ITIRIDGTLVAPSDF LTSNSENWI+F
Subjt:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF

Query:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS
        HN+NGV V+GG+IDG+G+ LWACKNS  TCP G T                                       V A  NSPNTDGIHVG SSHVTILNS
Subjt:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS

Query:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------
        NI TGDDCISIGPG+SNLWIEN+VCGPGHGISIGSLGK  KE GV+NVT                                                   
Subjt:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------

Query:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF
                 S + VS+V Y++IH TS T VA+KFDCSPKFPCKGI+LEDVKL+YKNQVAKASCSNAQGFDVGLVQPMGCF
Subjt:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF

XP_038888717.1 polygalacturonase-like [Benincasa hispida]6.6e-11660.74Show/hide
Query:  FNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNI
        FNL  FA PLTFNVV+FGAKP+N K DSSKAF LAW  AC+S+ PTSIYVP  KFYV SATFNGPC NNAITIRIDGTLVA SDFHL   SE+WIIFHN+
Subjt:  FNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNI

Query:  NGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIG
        NGV VLGGVIDG+GSGLWACKNSGK CP GAT                                       VSA  NSPNTDGIH+GGSS+VTI NS IG
Subjt:  NGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIG

Query:  TGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT------------------------------------------------------
        TGDDCISIGPGTSNLWIENI CGPGHGISIGSLGK  KE+GVENVT                                                      
Subjt:  TGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT------------------------------------------------------

Query:  -----DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF
             DS IK+S+VTYEDIH TS T V +KFDCSPK+PCKGIRLEDVKL+YKNQVAKASCSNAQG DVGLV  MGCF
Subjt:  -----DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF

TrEMBL top hitse value%identityAlignment
A0A0A0K6Z5 Uncharacterized protein1.5e-11358.42Show/hide
Query:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF
        M F NL  FATPLTFNV++FG KPNN + DSSKA QLAWM AC+S+ P +IYVP  KFYV SATFNGPC NN ITIRIDGTLVAPSDF LTSNSENWI+F
Subjt:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF

Query:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS
        HN+NGV V+GG+IDG+G+ LWACKNS  TCP G T                                       V A  NSPNTDGIHVG SSHVTILNS
Subjt:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS

Query:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------
        NI TGDDCISIGPG+SNLWIEN+VCGPGHGISIGSLGK  KE GV+NVT                                                   
Subjt:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------

Query:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF
                 S + VS+V Y++IH TS T VA+KFDCSPKFPCKGI+LEDVKL+YKNQVAKASCSNAQGFDVGLVQPMGCF
Subjt:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF

A0A1S3BJI1 polygalacturonase-like2.4e-11157.37Show/hide
Query:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF
        M F NL  F TPLTFNVV+FG KPNN + DSSKA QLAWM AC+S+ P +IYVP  KFYV SATFNGPC NN ITIRIDG L+APSDFHLTSNSENWI+F
Subjt:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF

Query:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS
        HN+NGV VLGG++DG+G+ LWACKNS  TCP G T                                       VSA GNSPNTDGIHVG SSHVTILN+
Subjt:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS

Query:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------
        NI TGDDCISIGPG+SNLWIENI CGPGHGISIGSL K  KE GV+NVT                                                   
Subjt:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------

Query:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF
                 S + VS+V Y DI  TS T VA+KFDCSPKFPCKGI+LEDVKL+YKNQVAKASCSNAQG +VG+VQPMGCF
Subjt:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF

A0A5A7U863 Polygalacturonase-like2.4e-11157.37Show/hide
Query:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF
        M F NL  F TPLTFNVV+FG KPNN + DSSKA QLAWM AC+S+ P +IYVP  KFYV SATFNGPC NN ITIRIDG L+APSDFHLTSNSENWI+F
Subjt:  MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIF

Query:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS
        HN+NGV VLGG++DG+G+ LWACKNS  TCP G T                                       VSA GNSPNTDGIHVG SSHVTILN+
Subjt:  HNINGVAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNS

Query:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------
        NI TGDDCISIGPG+SNLWIENI CGPGHGISIGSL K  KE GV+NVT                                                   
Subjt:  NIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------

Query:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF
                 S + VS+V Y DI  TS T VA+KFDCSPKFPCKGI+LEDVKL+YKNQVAKASCSNAQG +VG+VQPMGCF
Subjt:  --------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF

A0A5A7V4D4 Polygalacturonase-like2.1e-9651.2Show/hide
Query:  LPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNING
        L +FA P+TFNVV+FGAKPNN KIDSSKAF+ AW  AC+S+   +IYVP  KFY+YSATF GPC NN IT+++DGTLVAP +FHLT+ S+ WIIF  +NG
Subjt:  LPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNING

Query:  VAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTG
        V VLGGVIDG+GS LWACK+SGKTCP G T                                       + AP NSPNTDGI +  +S+VTIL+SNIGTG
Subjt:  VAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTG

Query:  DDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT--------------------------------------------------------
        DDCIS+GPGTSN+ I+NI CGPGHGISIGSLG+  +E+GV+NVT                                                        
Subjt:  DDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT--------------------------------------------------------

Query:  ---DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF
           +S IK+S+VTY+ I+ TS + VA+K DCSPKFPCKGI LE+V+LTYKN  AKASC NAQG  V +V+PMGCF
Subjt:  ---DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF

O81245 Polygalacturonase2.1e-9651.2Show/hide
Query:  LPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNING
        L +FA P+TFNVV+FGAKPNN KIDSSKAF+ AW  AC+S+   +IYVP  KFY+YSATF GPC NN IT+++DGTLVAP +FHLT+ S+ WIIF  +NG
Subjt:  LPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNING

Query:  VAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTG
        V VLGGVIDG+GS LWACK+SGKTCP G T                                       + AP NSPNTDGI +  +S+VTIL+SNIGTG
Subjt:  VAVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTG

Query:  DDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT--------------------------------------------------------
        DDCIS+GPGTSN+ I+NI CGPGHGISIGSLG+  +E+GV+NVT                                                        
Subjt:  DDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT--------------------------------------------------------

Query:  ---DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF
           +S IK+S+VTY+ I+ TS + VA+K DCSPKFPCKGI LE+V+LTYKN  AKASC NAQG  V +V+PMGCF
Subjt:  ---DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438609.4e-6540.78Show/hide
Query:  PLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNG-PCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLG
        P T NV+++GAKP+  K DS+KAF  AW  AC SA PT+I VP  +F V +  F+G  C    I+IRI G++VAP DF + ++S++WI F ++  V++ G
Subjt:  PLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNG-PCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLG

Query:  GVIDGRGSGLWACKNS-GKTCPHGA---------------------------------------TVSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCI
        G++D +G+ LW CKN+ G  CP GA                                        VSA  NSPNTDGIHV  S  V I NS IGTGDDCI
Subjt:  GVIDGRGSGLWACKNS-GKTCPHGA---------------------------------------TVSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCI

Query:  SIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT----------------------------------------------------------DS
        SIGPG++N++I+ I CGPGHGISIGSLG+  +E GV+NVT                                                          +S
Subjt:  SIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT----------------------------------------------------------DS

Query:  RIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQG
         +KVSNV YEDIH TSNT+VA+  DCS + PC GI ++DV L   ++ A+ASC NA G
Subjt:  RIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQG

P26216 Exopolygalacturonase3.5e-4332.44Show/hide
Query:  TFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLG-GV
        +F++   GA   N K DS+KA Q AW  AC      +I +P   F V    F GPC  + +TI++DG L+A +D     +  NWI    ++ + + G G 
Subjt:  TFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLG-GV

Query:  IDGRGSGLWA---------CK-----------NSGKT-----------------CP----HGATVSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCIS
        +DG+G  +W+         CK           N+G+                  C        TV+APG+SPNTDGIH+G SS +TI N+ IG GDDCIS
Subjt:  IDGRGSGLWA---------CK-----------NSGKT-----------------CP----HGATVSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCIS

Query:  IGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVE--NVTD----------------------------------------------------------
        IGPGTS + I  + CGPGHGISIGSLG+   E  V   NV D                                                          
Subjt:  IGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVE--NVTD----------------------------------------------------------

Query:  SRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYK--NQVAKASCSNAQGFDVGLVQPMGCF
        S++ V +VT+++I  TS+T  A+   C+ K PC G+ ++DV + Y   N    A C+NA+G   G ++ + CF
Subjt:  SRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYK--NQVAKASCSNAQGFDVGLVQPMGCF

P35338 Exopolygalacturonase7.7e-4332.44Show/hide
Query:  TFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLG-GV
        +F++   GA   N K DS+KA Q AW  AC      +I +P   F V    F GPC  + +TI++DG L+A +D        NWI    ++ + + G G 
Subjt:  TFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLG-GV

Query:  IDGRGSGLWA---------CK-----------NSGKT-----------------CPH----GATVSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCIS
        +DG+G  +W+         CK           N+G+                  C +      TV+APG+SPNTDGIH+G SS +TI N+ IG GDDCIS
Subjt:  IDGRGSGLWA---------CK-----------NSGKT-----------------CPH----GATVSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCIS

Query:  IGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVE--NVTD----------------------------------------------------------
        IGPGTS + I  + CGPGHGISIGSLG+   E  V   NV D                                                          
Subjt:  IGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVE--NVTD----------------------------------------------------------

Query:  SRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYK--NQVAKASCSNAQGFDVGLVQPMGCF
        S++ V +VT+++I  TS+T  A+   C+ K PC G  ++DV + Y   N    A C+NA+G   G ++ + CF
Subjt:  SRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYK--NQVAKASCSNAQGFDVGLVQPMGCF

P35339 Exopolygalacturonase3.8e-4232.17Show/hide
Query:  TFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLG-GV
        +F++   GA   N K DS+KA Q AW  AC      +I +P   F V    F GPC  + +TI+++G L+A +D     +  NWI    ++ + + G G 
Subjt:  TFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLG-GV

Query:  IDGRGSGLWA---------CK-----------NSGKT-----------------CP----HGATVSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCIS
        +DG+G  +W+         CK           N+G+                  C         V+APG+SPNTDGIH+G SS VTI N+ IG GDDCIS
Subjt:  IDGRGSGLWA---------CK-----------NSGKT-----------------CP----HGATVSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCIS

Query:  IGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVE--NVTD----------------------------------------------------------
        IGPGTS + I  + CGPGHGISIGSLG+   E  V   NV D                                                          
Subjt:  IGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVE--NVTD----------------------------------------------------------

Query:  SRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYK--NQVAKASCSNAQGFDVGLVQPMGCF
        S++ V +VT+++I  TS+T  A+   C+ K PC G+ ++DV + Y   N    A C NA+G   G ++ + CF
Subjt:  SRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYK--NQVAKASCSNAQGFDVGLVQPMGCF

P48979 Polygalacturonase9.6e-8647.17Show/hide
Query:  ATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVL
        A+PLT+NV + GAK +  K DS+KAF  AW  AC S  P  IYVP   F++    F+GPC NNAIT RI GTLVAPSD+ +  N+ NWI FH++NGV + 
Subjt:  ATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVL

Query:  GGVIDGRGSGLWACKN-SGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDC
        GG++DG+G+ LWACK   G++CP GAT                                       VS  GNSPNTDGIHV  SS VTILNS I TGDDC
Subjt:  GGVIDGRGSGLWACKN-SGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDC

Query:  ISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT-----------------------------------------------------------
        +SIGPGTSNLWIE + CGPGHGISIGSLGK  +E GV+NVT                                                           
Subjt:  ISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT-----------------------------------------------------------

Query:  DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGC
         S +++S+VTYEDIH TS T+VA+KFDCSPK PC+ I+LEDVKLTYKNQ A++SCS+A G   G+VQP  C
Subjt:  DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGC

Arabidopsis top hitse value%identityAlignment
AT1G65570.1 Pectin lyase-like superfamily protein3.4e-6237.27Show/hide
Query:  FATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVY-SATFNG-PCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGV
        F    + NV++FGA PN   ++S+KAF  AW  AC       IYVP  ++ V     F G  C +  IT+RIDGTL+ P D+ L    ENW  F  ++ V
Subjt:  FATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVY-SATFNG-PCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGV

Query:  AVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTGD
         VLGG  D +GS LW+CK +G  CP GAT                                       + AP  SPNTDGIH+  S+ + + N++I TGD
Subjt:  AVLGGVIDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTGD

Query:  DCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------------
        DCISIGPGT NL ++ I CGPGHGISIGSL K  +E GVENVT                                                         
Subjt:  DCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT---------------------------------------------------------

Query:  --DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGC
          +S IK+++V Y  I  TS T++A+K DCS K PC GIR++ + LT   + AK SC+N  G  +GLV P GC
Subjt:  --DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGC

AT2G43860.1 Pectin lyase-like superfamily protein6.7e-6640.78Show/hide
Query:  PLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNG-PCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLG
        P T NV+++GAKP+  K DS+KAF  AW  AC SA PT+I VP  +F V +  F+G  C    I+IRI G++VAP DF + ++S++WI F ++  V++ G
Subjt:  PLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNG-PCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLG

Query:  GVIDGRGSGLWACKNS-GKTCPHGA---------------------------------------TVSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCI
        G++D +G+ LW CKN+ G  CP GA                                        VSA  NSPNTDGIHV  S  V I NS IGTGDDCI
Subjt:  GVIDGRGSGLWACKNS-GKTCPHGA---------------------------------------TVSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCI

Query:  SIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT----------------------------------------------------------DS
        SIGPG++N++I+ I CGPGHGISIGSLG+  +E GV+NVT                                                          +S
Subjt:  SIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT----------------------------------------------------------DS

Query:  RIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQG
         +KVSNV YEDIH TSNT+VA+  DCS + PC GI ++DV L   ++ A+ASC NA G
Subjt:  RIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQG

AT2G43870.1 Pectin lyase-like superfamily protein5.4e-7642.7Show/hide
Query:  TFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNG-PCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLGGV
        ++NV++FGAKP+  K D++KAF   W  AC S+ P +I VP  +F + S TF+G  C    +T RIDGTLVAP+D+ +  N + WI F +++G+ V GGV
Subjt:  TFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNG-PCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLGGV

Query:  IDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCISIG
        +D RG+ LW CK SGK CP GAT                                       V A GNSPNTDGIHV  SS V+I N+ I TGDDC+SIG
Subjt:  IDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCISIG

Query:  PGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT----------------------------------------------------------DSRIK
        PGT+ LWIEN+ CGPGHGISIGSLGK S E GV+NVT                                                           S IK
Subjt:  PGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT----------------------------------------------------------DSRIK

Query:  VSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQP
        +S+V + DIH TS T+V +K DCS K PC GIRLEDVKLTY+N+ A ++C++A G + G  QP
Subjt:  VSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQP

AT2G43890.1 Pectin lyase-like superfamily protein1.3e-6436.51Show/hide
Query:  TFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFH
        +F  + +      +NVV+FGAKP+  + DS+KAF  AW  AC SA   ++ VP   F +    F GPC +  IT +I GT+VAPSD+    NS  WI+F 
Subjt:  TFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFH

Query:  NINGVAVLGGVIDGRGSGLWACKNSGKTCPHGA---------------------------------------TVSAPGNSPNTDGIHVGGSSHVTILNSN
         +N ++++GG +D RG+  WAC+ SGK+CP GA                                        + AP  SPNTDG+HV GS+ VT+ +  
Subjt:  NINGVAVLGGVIDGRGSGLWACKNSGKTCPHGA---------------------------------------TVSAPGNSPNTDGIHVGGSSHVTILNSN

Query:  IGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT----------------------------------------------------
          TGDDCISIGPGT NL++  + CGPGHGISIGSLG+ + E GVEN+T                                                    
Subjt:  IGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT----------------------------------------------------

Query:  -------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGC
                S +K+S V Y +I  TS TQ A+ FDCS   PC+ IRL D+KLT+  + A ++C N +G   G+V P GC
Subjt:  -------DSRIKVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGC

AT3G59850.1 Pectin lyase-like superfamily protein1.0e-7441.69Show/hide
Query:  TFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNG-PCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLGGV
        T+N++++GAKP+  K DS+KAF + W  AC S  P +I VP  +F + S  F+G  C   ++T RI GTLVAPSD+ +      WI+F +++G++V GGV
Subjt:  TFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNG-PCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLGGV

Query:  IDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCISIG
        +D +G+ LW+CK SGK CP GAT                                       VSA GNSPNTDGIHV  SS V+ILNS I TGDDC+SIG
Subjt:  IDGRGSGLWACKNSGKTCPHGAT---------------------------------------VSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCISIG

Query:  PGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT-----------------------------------------------------------DSRI
        PGT+ LWIEN+ CGPGHGISIGSLGK S E GV+N+T                                                            S I
Subjt:  PGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVT-----------------------------------------------------------DSRI

Query:  KVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGC
        K+S+V + DIH TS T+V +K DCS K PC GIR++DVKLTY+N+ A   CS+A G + G  +P  C
Subjt:  KVSNVTYEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTTCTTCAATTTACCTACCTTTGCTACTCCGTTAACATTCAACGTTGTCAATTTTGGAGCCAAACCCAACAACCCCAAAATCGACTCATCGAAGGCCTTCCAATT
GGCATGGATGTGTGCTTGTACCTCTGCTACACCGACATCCATTTATGTGCCTAACACCAAATTCTACGTTTACAGTGCAACTTTTAATGGGCCATGCAATAATAATGCCA
TTACTATACGTATTGATGGTACTCTCGTGGCTCCCTCGGACTTCCATCTCACTAGCAACTCTGAAAATTGGATCATTTTTCACAATATTAATGGAGTTGCTGTCTTGGGT
GGCGTTATTGATGGCCGAGGATCTGGGCTTTGGGCTTGCAAAAACTCTGGCAAGACCTGTCCTCATGGAGCCACGGTTTCGGCCCCTGGCAATAGCCCGAACACTGATGG
AATTCACGTAGGCGGATCATCTCATGTCACTATCCTCAACTCCAATATCGGCACTGGTGACGACTGCATCTCAATAGGCCCTGGCACTTCCAACTTATGGATTGAGAATA
TTGTTTGTGGACCTGGCCATGGAATTAGCATTGGGAGTTTAGGAAAAGGGTCAAAGGAGGACGGCGTTGAGAACGTGACGGATTCTAGAATTAAAGTTAGCAATGTGACA
TATGAAGATATTCACCGGACATCGAACACGCAAGTGGCCATGAAATTTGATTGTAGTCCAAAATTTCCATGCAAAGGAATAAGGTTGGAGGATGTTAAGCTTACTTACAA
GAATCAAGTAGCCAAAGCTTCATGTAGTAATGCTCAAGGATTTGATGTTGGCTTGGTTCAGCCTATGGGTTGCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGTTCTTCAATTTACCTACCTTTGCTACTCCGTTAACATTCAACGTTGTCAATTTTGGAGCCAAACCCAACAACCCCAAAATCGACTCATCGAAGGCCTTCCAATT
GGCATGGATGTGTGCTTGTACCTCTGCTACACCGACATCCATTTATGTGCCTAACACCAAATTCTACGTTTACAGTGCAACTTTTAATGGGCCATGCAATAATAATGCCA
TTACTATACGTATTGATGGTACTCTCGTGGCTCCCTCGGACTTCCATCTCACTAGCAACTCTGAAAATTGGATCATTTTTCACAATATTAATGGAGTTGCTGTCTTGGGT
GGCGTTATTGATGGCCGAGGATCTGGGCTTTGGGCTTGCAAAAACTCTGGCAAGACCTGTCCTCATGGAGCCACGGTTTCGGCCCCTGGCAATAGCCCGAACACTGATGG
AATTCACGTAGGCGGATCATCTCATGTCACTATCCTCAACTCCAATATCGGCACTGGTGACGACTGCATCTCAATAGGCCCTGGCACTTCCAACTTATGGATTGAGAATA
TTGTTTGTGGACCTGGCCATGGAATTAGCATTGGGAGTTTAGGAAAAGGGTCAAAGGAGGACGGCGTTGAGAACGTGACGGATTCTAGAATTAAAGTTAGCAATGTGACA
TATGAAGATATTCACCGGACATCGAACACGCAAGTGGCCATGAAATTTGATTGTAGTCCAAAATTTCCATGCAAAGGAATAAGGTTGGAGGATGTTAAGCTTACTTACAA
GAATCAAGTAGCCAAAGCTTCATGTAGTAATGCTCAAGGATTTGATGTTGGCTTGGTTCAGCCTATGGGTTGCTTTTAG
Protein sequenceShow/hide protein sequence
MTFFNLPTFATPLTFNVVNFGAKPNNPKIDSSKAFQLAWMCACTSATPTSIYVPNTKFYVYSATFNGPCNNNAITIRIDGTLVAPSDFHLTSNSENWIIFHNINGVAVLG
GVIDGRGSGLWACKNSGKTCPHGATVSAPGNSPNTDGIHVGGSSHVTILNSNIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLGKGSKEDGVENVTDSRIKVSNVT
YEDIHRTSNTQVAMKFDCSPKFPCKGIRLEDVKLTYKNQVAKASCSNAQGFDVGLVQPMGCF