; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G009130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G009130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L7-1
Genome locationchr03:17045556..17049773
RNA-Seq ExpressionLsi03G009130
SyntenyLsi03G009130
Gene Ontology termsGO:0005840 - ribosome (cellular component)
InterPro domainsIPR035808 - Ribosomal protein L7, eukaryotic/archaeal
IPR036919 - Ribosomal protein L30, ferredoxin-like fold domain superfamily
IPR039699 - Ribosomal protein L7/L30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038503.1 60S ribosomal protein L7-1 [Cucumis melo var. makuwa]1.6e-3968.09Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        +SR+FS+ FAKANES+L KLQ +       +  + Y NLKNVRELVYKKGF KIDKQR VPLTD NIIEQ           DMV+EIA VGPHFKEVI F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE
        LWP EL+KP GGG LQGKKS YK+GGD GNREDDINDLINE
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE

XP_008465636.1 PREDICTED: 60S ribosomal protein L7-1 [Cucumis melo]1.6e-3968.09Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        +SR+FS+ FAKANES+L KLQ +       +  + Y NLKNVRELVYKKGF KIDKQR VPLTD NIIEQ           DMV+EIA VGPHFKEVI F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE
        LWP EL+KP GGG LQGKKS YK+GGD GNREDDINDLINE
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE

XP_031737493.1 60S ribosomal protein L7-1-like [Cucumis sativus]3.1e-3868.79Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        +SR+FS+ FAKANESIL KLQ +       +  + Y NLKNVREL+YKKGF KIDKQR VPLTD NIIEQ           DMVHEIA VGPHFKEVI F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE
        LWP EL+KP GG  LQGKKS YKEGGD GNREDDINDLINE
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE

XP_031739353.1 60S ribosomal protein L7-1 [Cucumis sativus]2.8e-3970.21Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        +SR+FS+ FAKANESIL KLQ +       +  + Y NLKNVRELVYKKGF KIDKQR VPLTD NIIEQ           DMVHEIA VGPHFKEVI F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE
        LWP EL+KP GGG LQGKKS YKEGGD GNREDDINDLINE
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE

XP_038886994.1 60S ribosomal protein L7-1-like [Benincasa hispida]3.6e-3969.5Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        +SR+FS+ FAKANESIL KLQ +       +  + Y NLKNVRELVYKKGF KIDKQR VPLTD NIIEQ           DMVHEIA VGPHFKEVI F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE
        LWP EL+KP GGG LQGKKSLYK+GGD GNR DDINDLINE
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE

TrEMBL top hitse value%identityAlignment
A0A1S3CPC0 60S ribosomal protein L7-17.9e-4068.09Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        +SR+FS+ FAKANES+L KLQ +       +  + Y NLKNVRELVYKKGF KIDKQR VPLTD NIIEQ           DMV+EIA VGPHFKEVI F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE
        LWP EL+KP GGG LQGKKS YK+GGD GNREDDINDLINE
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE

A0A5D3E4T2 60S ribosomal protein L7-17.9e-4068.09Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        +SR+FS+ FAKANES+L KLQ +       +  + Y NLKNVRELVYKKGF KIDKQR VPLTD NIIEQ           DMV+EIA VGPHFKEVI F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE
        LWP EL+KP GGG LQGKKS YK+GGD GNREDDINDLINE
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE

A0A5D3E729 60S ribosomal protein L7-17.9e-4068.09Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        +SR+FS+ FAKANES+L KLQ +       +  + Y NLKNVRELVYKKGF KIDKQR VPLTD NIIEQ           DMV+EIA VGPHFKEVI F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE
        LWP EL+KP GGG LQGKKS YK+GGD GNREDDINDLINE
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE

A0A6J1DN17 60S ribosomal protein L7-1-like3.3e-3865.96Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        +SR+FS+ FAKANESIL KLQ +       +  + Y NLKNV EL+YKKGF KIDKQ+ VP+TD NIIEQ           D+VH+IA VGPHFKEVI F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE
        LWP ELDKP GGG LQGKK+LYK+GGD GNREDDINDLINE
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE

A0A6J1I831 60S ribosomal protein L7-1-like1.8e-3667.14Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        +SRVFS  FAKANE IL KLQ +       +  + Y NLKNVRELV+KKGF KIDKQR VPLTD NIIEQ           D+VHEIA VGPHFKEVI F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLIN
        LWP EL+KP  G  LQGKKSLYKEGGD GNREDDINDLI+
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLIN

SwissProt top hitse value%identityAlignment
O01802 60S ribosomal protein L78.7e-2041.13Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        + ++ +  F K N++ L  L+  I+ P   +  + Y N K + +L+YK+G+ K+D  R VP+TD  I+EQ           D+ HEIATVGPHFKE   F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE
        LWP +L+ P GG +   K + + EGGD GNRED IN+L+ +
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE

P60039 60S ribosomal protein L7-33.5e-2141.01Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        + ++F+  F K N++ +  L+ +       +  + Y NLK+V+EL+YK+G+ K++ QR + LTD +I++Q           D++HEI TVGPHFKE   F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI
        LWP +L  P GG  L+ K++ Y EGGD GNRE+ IN+L+
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI

P60040 60S ribosomal protein L7-22.7e-2141.73Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        + ++F+  F K N++ +  L+ +       +  + + NLK+V+EL+YK+G+ K++ QR + LTD +I+EQ           D++HEI TVGPHFKE   F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI
        LWP +L  P GG  L+ K++ Y EGGD GNRE+ IN+LI
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI

Q9LHP1 60S ribosomal protein L7-44.6e-2141.01Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        + ++F+  F K N++ +  L+ +       +  + Y NLK+V+EL+YK+GF K++ QR   LTD +I++Q           D++HEI TVGPHFKE   F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI
        LWP +L  P GG  ++ K++ Y EGGD GNRE+ IN+L+
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI

Q9SAI5 60S ribosomal protein L7-16.0e-2146.81Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        +  VF+  FAKA +S+ +KL  L + P   +  + Y N K+V++L+YKKG T I+    VPLTD NIIEQ           D+V+EIA VG HF+EV+ F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE
        L P++L+KP     L  KK ++ EGGD GNRED INDLI++
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINE

Arabidopsis top hitse value%identityAlignment
AT2G01250.1 Ribosomal protein L30/L7 family protein1.9e-2241.73Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        + ++F+  F K N++ +  L+ +       +  + + NLK+V+EL+YK+G+ K++ QR + LTD +I+EQ           D++HEI TVGPHFKE   F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI
        LWP +L  P GG  L+ K++ Y EGGD GNRE+ IN+LI
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI

AT2G44120.1 Ribosomal protein L30/L7 family protein2.5e-2241.01Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        + ++F+  F K N++ +  L+ +       +  + Y NLK+V+EL+YK+G+ K++ QR + LTD +I++Q           D++HEI TVGPHFKE   F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI
        LWP +L  P GG  L+ K++ Y EGGD GNRE+ IN+L+
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI

AT2G44120.2 Ribosomal protein L30/L7 family protein2.5e-2241.01Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        + ++F+  F K N++ +  L+ +       +  + Y NLK+V+EL+YK+G+ K++ QR + LTD +I++Q           D++HEI TVGPHFKE   F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI
        LWP +L  P GG  L+ K++ Y EGGD GNRE+ IN+L+
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI

AT3G13580.2 Ribosomal protein L30/L7 family protein3.3e-2241.01Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        + ++F+  F K N++ +  L+ +       +  + Y NLK+V+EL+YK+GF K++ QR   LTD +I++Q           D++HEI TVGPHFKE   F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI
        LWP +L  P GG  ++ K++ Y EGGD GNRE+ IN+L+
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI

AT3G13580.3 Ribosomal protein L30/L7 family protein3.3e-2241.01Show/hide
Query:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF
        + ++F+  F K N++ +  L+ +       +  + Y NLK+V+EL+YK+GF K++ QR   LTD +I++Q           D++HEI TVGPHFKE   F
Subjt:  ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQ-----------DMVHEIATVGPHFKEVIYF

Query:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI
        LWP +L  P GG  ++ K++ Y EGGD GNRE+ IN+L+
Subjt:  LWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAAGTAGAGTTTTCAGCTCATTTTTTGCTAAGGCTAATGAGAGTATTCTAAGGAAGCTACAAAGTCTTATATTAGCTCCTTCATTAGATTTCACACTTTTCTTATACCT
GAATCTTAAAAATGTGAGGGAGCTCGTCTATAAGAAGGGATTCACAAAGATCGACAAACAAAGATTAGTTCCTCTGACCGATTACAACATCATTGAACAGGATATGGTGC
ATGAAATTGCTACTGTTGGTCCTCATTTTAAGGAGGTAATTTACTTTTTATGGCCTGTTGAACTTGACAAGCCAGAAGGAGGAGGGAGCCTTCAAGGGAAAAAGTCATTA
TACAAGGAGGGTGGAGATGTTGGTAATAGAGAGGATGATATCAATGATCTGATTAATGAGCAATGCAATGGGGACTACAATAGACCGATGCTAAGTAAAGCAATGGTACC
CGAAGACTCAAATGAAGAGCTATCGATGAAAGATCCCGCCCATTTTTGGTTTTCTTCGAACCAATGGGAGACTTGCATCTCCGGCGACTCAGATATGGGACTTCCGTCAA
AGCTTCATAGTTGTATCAAAGGTGAAATAGACCAACCTATCAACTTAAGAGGGAACGAAGACACC
mRNA sequenceShow/hide mRNA sequence
ATAAGTAGAGTTTTCAGCTCATTTTTTGCTAAGGCTAATGAGAGTATTCTAAGGAAGCTACAAAGTCTTATATTAGCTCCTTCATTAGATTTCACACTTTTCTTATACCT
GAATCTTAAAAATGTGAGGGAGCTCGTCTATAAGAAGGGATTCACAAAGATCGACAAACAAAGATTAGTTCCTCTGACCGATTACAACATCATTGAACAGGATATGGTGC
ATGAAATTGCTACTGTTGGTCCTCATTTTAAGGAGGTAATTTACTTTTTATGGCCTGTTGAACTTGACAAGCCAGAAGGAGGAGGGAGCCTTCAAGGGAAAAAGTCATTA
TACAAGGAGGGTGGAGATGTTGGTAATAGAGAGGATGATATCAATGATCTGATTAATGAGCAATGCAATGGGGACTACAATAGACCGATGCTAAGTAAAGCAATGGTACC
CGAAGACTCAAATGAAGAGCTATCGATGAAAGATCCCGCCCATTTTTGGTTTTCTTCGAACCAATGGGAGACTTGCATCTCCGGCGACTCAGATATGGGACTTCCGTCAA
AGCTTCATAGTTGTATCAAAGGTGAAATAGACCAACCTATCAACTTAAGAGGGAACGAAGACACC
Protein sequenceShow/hide protein sequence
ISRVFSSFFAKANESILRKLQSLILAPSLDFTLFLYLNLKNVRELVYKKGFTKIDKQRLVPLTDYNIIEQDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSL
YKEGGDVGNREDDINDLINEQCNGDYNRPMLSKAMVPEDSNEELSMKDPAHFWFSSNQWETCISGDSDMGLPSKLHSCIKGEIDQPINLRGNEDT