; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G009440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G009440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description30S ribosomal protein S11
Genome locationchr03:18036329..18039252
RNA-Seq ExpressionLsi03G009440
SyntenyLsi03G009440
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0048027 - mRNA 5'-UTR binding (molecular function)
GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR001971 - Ribosomal protein S11
IPR036967 - Ribosomal protein S11 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030891.1 putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-12178.25Show/hide
Query:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSF---HRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA
        M +L   HLSSLFRSSSL HG SFS  RLSISPF G+D+RS MSS    H S+++GSVQL++Q SGC+DL +GDS NVGREIVGRAWKALGAQG CWGLA
Subjt:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSF---HRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA

Query:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL
        RS E+VSVPYS+SSRCY  YD RPNADTGRN KSM+FVRGILEEDG DFMGSSQFP PPNMEHNADIVH+K++RNN FITVTDNKGNTKLKAS+GRLEEL
Subjt:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL

Query:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
        KGG ++SR+AA   AEYVGRES+KLGLKSVVMRVKGF +FK+K+Q I+SWRDGFTDS+ DQNPIVY+EDTTRRAHNGCRL KQRR
Subjt:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

XP_022942058.1 probable ribosomal protein S11, mitochondrial [Cucurbita moschata]1.8e-12178.25Show/hide
Query:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSF---HRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA
        M +L   HLSSLFRSSSL HG SFS SRLSISPF G+D+RS MSS    H S+++GSVQL++Q SGC++L +GDS NVGREIVGRAWKALGAQG CWGLA
Subjt:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSF---HRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA

Query:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL
        RS E+VSVPYS+SSRCY  YD RPNADTGRN KSM+FVRGILEEDG DFMGSSQFP PPNMEHNADIVH+K++RNN FITVTDNKGNTKLKAS+GRLEEL
Subjt:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL

Query:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
        KGG ++SR+AA   AEYVGRES+KLGLKSVVMRVKGF +FK+K+Q I+SWRDGFTDS+ DQNPIVY+EDTTRRAHNGCRL KQRR
Subjt:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

XP_022999735.1 probable ribosomal protein S11, mitochondrial [Cucurbita maxima]2.1e-12279.65Show/hide
Query:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRS---SMSSFHRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA
        M +L L HLSSLFRSSSL HG SFS SR+SISPF G+D RS   S+ S H SDL+GSVQL++Q SGC+DL +GDS NVGREIVGRAWKALGAQG CWGLA
Subjt:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRS---SMSSFHRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA

Query:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL
        RS E+VSVPYS+SSRCY  YD  PNADTGRN KSM+FVRGILEEDG +FMGSSQFP PPNMEHNADIVH+K++RNN FITVTDNKGNTKLKASAGRLEEL
Subjt:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL

Query:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
        KGG ++SR+AA   AEYVGRESRKLGLKSVVMRVKGF +FK+K+Q I+SWRDGFTDSRSDQNPIVY+EDTTRRAHNGCRL KQRR
Subjt:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

XP_023526167.1 probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo]2.2e-11977.54Show/hide
Query:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSFH---RSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA
        M +L L HLSSLFRSSSL HG SFS SRLSISPF G+D+RS MSS H    S+++GSVQ+++Q SGC+DL +GDS NVGREIVGRA K LGAQG CWGLA
Subjt:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSFH---RSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA

Query:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL
        RS E+VSVPYS+SSRCY  YD RPNADTGRN KSM+FVRGILEED  DFMGSSQFP PPNMEHNADIVH+K++RNN FITVTDNKGNTKLKAS+GRLEEL
Subjt:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL

Query:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
        KGG ++SR+AA   AEYVGRES+KLGLKSVVMRVKGF +FK+K+Q I+SWRDGFTDS+ DQNPIVY+EDTTRRAHNGCRL KQRR
Subjt:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

XP_038903066.1 probable ribosomal protein S11, mitochondrial [Benincasa hispida]9.8e-12884.4Show/hide
Query:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSFHRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLARSG
        MPKLSLSHL SLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSS HRSDLTGS++L+ Q+SGCLDLSQGDSANVGREIVGR WK+ GAQGSCW L RS 
Subjt:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSFHRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLARSG

Query:  ESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGG
        E VSV +STS RCYGQYDNRPNADTGRNL SMSFVR  LEE G+ F GSS+F   PNMEHNADIVH+K+LRNN FITVTDNKGNTKLKASAGRLEELKGG
Subjt:  ESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGG

Query:  ARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
         ++SR+AA  VAEYVGRESRKLGLKSVVMRVKGF  FKRKRQ I+SWR GFTDSRSDQNPIVY+EDTTRRAHNGCRL KQRR
Subjt:  ARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

TrEMBL top hitse value%identityAlignment
A0A0A0KVQ8 Uncharacterized protein2.8e-11276.33Show/hide
Query:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSFHRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLARSG
        MPKLSLSHLSSLFRSSSL   PSFSPSRLSISPFIGSD+ S MSS HRSDLTGS+Q   Q SGCL     DSANVGREIVGR WK++G QG   GLAR  
Subjt:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSFHRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLARSG

Query:  ESVSVPYSTSSRCYGQYDNRPN-ADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKG
        E VS+PYS SSRCYG+YDNRPN  DTGRNLK M+FVRGILEE+ + F G+ QF  P NMEHNADIVH+K++RNN F+TVTDNKGNTKLKASAGRLE   G
Subjt:  ESVSVPYSTSSRCYGQYDNRPN-ADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKG

Query:  GARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
        GA++SR++A+++AEYVGRESRKLGLKSVVMRVKGF FFK+K+Q I+SWRDGFTDSR+DQNPIVYVEDTTRRAHNGCRL K+RR
Subjt:  GARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

A0A5A7TPI6 Putative ribosomal protein S117.9e-10773.94Show/hide
Query:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSFHRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLARSG
        MPKLSLSHLS LFRSSSL   PSFSPSRLSISPFIGSD+ S  SS   S LTGS+Q     SG          +VGREIVGR WKA+G QG  WGLARS 
Subjt:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSFHRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLARSG

Query:  ESVSVPYSTSSRCYGQYDNRPN-ADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELK-
        ESVSVPYS SSRCYG+YDNRPN  DTGRNLK+++FVRGILEED K F    Q+  P NMEHNADIVH+K++RNN F+TVTDNKGNTKLKASAGRLEELK 
Subjt:  ESVSVPYSTSSRCYGQYDNRPN-ADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELK-

Query:  GGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
        GGA++SR++ +++AEYVGRESRKLGLKSVVMRVKGF FFK+K+Q I+SWRDGFTDSRSDQNPIVY+EDTTRRAHNGCRL K+RR
Subjt:  GGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

A0A6J1CJJ5 probable ribosomal protein S11, mitochondrial5.6e-11376.84Show/hide
Query:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSF--HRSDLTGSVQLEKQVSGCLDLSQGDSANVGREI-VGRAWKALGAQGSCWGLA
        M +L LSHLSSLFRSSSL HG S SP R SIS F GSD+RS M+S   HRSDLTGSVQL+ QVSGCLDL QGDS +VGR+I VGRAWKALG  G      
Subjt:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSF--HRSDLTGSVQLEKQVSGCLDLSQGDSANVGREI-VGRAWKALGAQGSCWGLA

Query:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL
        RS E+VSVPY+ +S+CY  YD+R NADTGRN KSM+FVRGILEEDG+DFM  S FP PPNME NADIVH+K++RNN FITVTDNKGNTKLKASAGRLEEL
Subjt:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL

Query:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
        KGG ++SR+AA  +AEYVGRESRKLGLKSVVMRVKGF +FK+KRQ IMSWRDGFTDSRSDQNPIVY+EDTTRRAHNGCRL KQRR
Subjt:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

A0A6J1FTT5 probable ribosomal protein S11, mitochondrial8.7e-12278.25Show/hide
Query:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSF---HRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA
        M +L   HLSSLFRSSSL HG SFS SRLSISPF G+D+RS MSS    H S+++GSVQL++Q SGC++L +GDS NVGREIVGRAWKALGAQG CWGLA
Subjt:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSF---HRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA

Query:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL
        RS E+VSVPYS+SSRCY  YD RPNADTGRN KSM+FVRGILEEDG DFMGSSQFP PPNMEHNADIVH+K++RNN FITVTDNKGNTKLKAS+GRLEEL
Subjt:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL

Query:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
        KGG ++SR+AA   AEYVGRES+KLGLKSVVMRVKGF +FK+K+Q I+SWRDGFTDS+ DQNPIVY+EDTTRRAHNGCRL KQRR
Subjt:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

A0A6J1KGF8 probable ribosomal protein S11, mitochondrial1.0e-12279.65Show/hide
Query:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRS---SMSSFHRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA
        M +L L HLSSLFRSSSL HG SFS SR+SISPF G+D RS   S+ S H SDL+GSVQL++Q SGC+DL +GDS NVGREIVGRAWKALGAQG CWGLA
Subjt:  MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRS---SMSSFHRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLA

Query:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL
        RS E+VSVPYS+SSRCY  YD  PNADTGRN KSM+FVRGILEEDG +FMGSSQFP PPNMEHNADIVH+K++RNN FITVTDNKGNTKLKASAGRLEEL
Subjt:  RSGESVSVPYSTSSRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL

Query:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
        KGG ++SR+AA   AEYVGRESRKLGLKSVVMRVKGF +FK+K+Q I+SWRDGFTDSRSDQNPIVY+EDTTRRAHNGCRL KQRR
Subjt:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

SwissProt top hitse value%identityAlignment
A5D5E6 30S ribosomal protein S111.1e-0735.29Show/hide
Query:  IVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVY
        + H+K   NN  +T+TD KGNT   +SAG++   KG  + + FAA   AE   RE+ + GLK V + VKG      +   I S +    +       +  
Subjt:  IVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVY

Query:  VEDTTRRAHNGCRLRKQRR
        ++D T   HNGCR  K+RR
Subjt:  VEDTTRRAHNGCRLRKQRR

B3QYE8 30S ribosomal protein S111.4e-0736.07Show/hide
Query:  IVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQN---P
        IVH+K   NNI +T+TD  GNT   ++AG+    KG  + + +A+   AE   +E+  LG++ V +R+KG            S RD     RS QN    
Subjt:  IVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQN---P

Query:  IVYVEDTTRRAHNGCRLRKQRR
        +  + D T   HNGCR  K+RR
Subjt:  IVYVEDTTRRAHNGCRLRKQRR

P46746 Ribosomal protein S11, mitochondrial1.4e-0728.8Show/hide
Query:  MEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSD
        +E  + IVH++   NN  IT+TD +GNT+   SAG L   K   + + +A+   AE +  ++   G +++++++KG  + K         +      +  
Subjt:  MEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSD

Query:  QNPIVYVEDTTRRAHNGCRLRKQRR
           I  +++ T  AHNGCR  K+RR
Subjt:  QNPIVYVEDTTRRAHNGCRLRKQRR

Q4G348 30S ribosomal protein S11, chloroplastic5.2e-0734.43Show/hide
Query:  NADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNP
        NA IVH+K   NN  + +TD +GNT   ASAG     KG  + + FAA + AE VG  + + G+K   + + G       R+T           +S    
Subjt:  NADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNP

Query:  IVYVEDTTRRAHNGCRLRKQRR
        ++ ++D T   HNGCR  K+RR
Subjt:  IVYVEDTTRRAHNGCRLRKQRR

Q8VZT8 Probable ribosomal protein S11, mitochondrial4.4e-4649.19Show/hide
Query:  GESVSVPYSTSSRCYGQYDN--RPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL
        G   S P  +S   + Q  +  + N+ +G     + FVR ++E++G+   G       PN+E NADI+H+KMLRNN F+TVTD+KGN K KA++G L +L
Subjt:  GESVSVPYSTSSRCYGQYDN--RPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL

Query:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
        KGG +M+ + A+  AE +GR ++ +GLKSVV++V GF  F +K++ I+++RDGFT+SRSDQNPIVY+EDTTR+AHNGCRL ++RR
Subjt:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

Arabidopsis top hitse value%identityAlignment
AT1G31817.1 Ribosomal L18p/L5e family protein3.1e-4749.19Show/hide
Query:  GESVSVPYSTSSRCYGQYDN--RPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL
        G   S P  +S   + Q  +  + N+ +G     + FVR ++E++G+   G       PN+E NADI+H+KMLRNN F+TVTD+KGN K KA++G L +L
Subjt:  GESVSVPYSTSSRCYGQYDN--RPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEEL

Query:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR
        KGG +M+ + A+  AE +GR ++ +GLKSVV++V GF  F +K++ I+++RDGFT+SRSDQNPIVY+EDTTR+AHNGCRL ++RR
Subjt:  KGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRR

ATCG00750.1 ribosomal protein S117.3e-0430.25Show/hide
Query:  IVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVY
        ++H++   NN  +TVTD +G     +SAG     +G  R + FAA T A    R     G++   +R+KG    +      +  R G          + +
Subjt:  IVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGGARMSRFAANTVAEYVGRESRKLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVY

Query:  VEDTTRRAHNGCRLRKQRR
        V D T   HNGCR  K+RR
Subjt:  VEDTTRRAHNGCRLRKQRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAAACTTTCCCTCTCTCACCTCTCTTCTCTCTTCCGCTCGTCCTCTCTCCGTCATGGCCCTTCATTTTCTCCATCTCGCCTCTCCATTTCTCCATTCATTGGCTC
AGATTCGCGTTCTTCCATGTCCTCTTTCCACCGATCAGATCTCACTGGATCCGTTCAACTAGAAAAGCAAGTCTCAGGGTGTCTCGACCTTTCGCAAGGTGATTCTGCGA
ATGTTGGTCGGGAGATTGTAGGACGTGCTTGGAAAGCCTTGGGAGCTCAGGGTTCTTGTTGGGGTTTGGCGCGTTCAGGTGAAAGTGTCTCCGTTCCTTATTCTACTAGC
TCTAGATGTTATGGACAGTACGACAACCGGCCAAATGCTGATACAGGAAGAAATCTGAAGTCTATGAGTTTTGTTAGGGGAATTTTAGAGGAAGATGGAAAGGATTTTAT
GGGTAGTTCTCAGTTCCCTGGACCACCCAATATGGAACACAATGCTGATATTGTTCATTTAAAGATGTTGCGTAACAATATATTTATCACTGTCACGGATAACAAGGGAA
ATACAAAGCTCAAGGCCTCAGCTGGTCGTCTTGAAGAACTGAAAGGAGGGGCTAGAATGTCCCGTTTTGCTGCTAACACAGTTGCAGAGTATGTTGGTCGTGAATCTCGA
AAATTGGGGCTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTGCTTTTTTTAAGAGGAAAAGGCAAACGATCATGAGTTGGAGAGATGGATTTACTGATTCTAGAAGTGA
TCAAAATCCGATTGTCTACGTTGAAGATACTACAAGACGTGCTCACAATGGTTGCCGACTCCGAAAGCAACGCCGAACCTAG
mRNA sequenceShow/hide mRNA sequence
AGTCAATATATACATTTGAAGAAAGTAGGGCACCCTCTATGTTTCATCATCCACTAAGAGAGGAAAAGAATTAGGGTTTTTTCTTTTCAGCACTTCTTATTCACAGAACC
ACCGCCTGCGGCCGTCCGGCGACGATGCCGAAACTTTCCCTCTCTCACCTCTCTTCTCTCTTCCGCTCGTCCTCTCTCCGTCATGGCCCTTCATTTTCTCCATCTCGCCT
CTCCATTTCTCCATTCATTGGCTCAGATTCGCGTTCTTCCATGTCCTCTTTCCACCGATCAGATCTCACTGGATCCGTTCAACTAGAAAAGCAAGTCTCAGGGTGTCTCG
ACCTTTCGCAAGGTGATTCTGCGAATGTTGGTCGGGAGATTGTAGGACGTGCTTGGAAAGCCTTGGGAGCTCAGGGTTCTTGTTGGGGTTTGGCGCGTTCAGGTGAAAGT
GTCTCCGTTCCTTATTCTACTAGCTCTAGATGTTATGGACAGTACGACAACCGGCCAAATGCTGATACAGGAAGAAATCTGAAGTCTATGAGTTTTGTTAGGGGAATTTT
AGAGGAAGATGGAAAGGATTTTATGGGTAGTTCTCAGTTCCCTGGACCACCCAATATGGAACACAATGCTGATATTGTTCATTTAAAGATGTTGCGTAACAATATATTTA
TCACTGTCACGGATAACAAGGGAAATACAAAGCTCAAGGCCTCAGCTGGTCGTCTTGAAGAACTGAAAGGAGGGGCTAGAATGTCCCGTTTTGCTGCTAACACAGTTGCA
GAGTATGTTGGTCGTGAATCTCGAAAATTGGGGCTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTGCTTTTTTTAAGAGGAAAAGGCAAACGATCATGAGTTGGAGAGA
TGGATTTACTGATTCTAGAAGTGATCAAAATCCGATTGTCTACGTTGAAGATACTACAAGACGTGCTCACAATGGTTGCCGACTCCGAAAGCAACGCCGAACCTAGATGT
ATGATGCTAGATCTTGCTCATACAACAGAAAATTGGTGATGAGGTCTTTGTTTTATCTTTGTTGGCTCGGTTCGAAGTGATGTAGCTTGGCTTGAGTTTTTACTTGCTTA
TTTCCATAAGGATGACAATTCGGATGTTTCTATATGCATCATTGTAAAATTTTCCTGGTTTAAATTGATGTAGCTTGCCTTCAAGTTCTTACTTGCTTATTGCAATAATG
ATGACAATAGGATGGTTTTCTATATACGTCAGTGTAAAACAATTGCTTTCTAGTTAGTACCATTTGGAATTCATTTCAATAGAACGATATCAAGAATTCAAGTGGCCCCA
GTTTCCAATCTTTTTACTTGGAAGTTTATTTTCTTCTGTTACACTCTAGACTCTGTCGTGGATTACACATTTCTTGGATCTTACTTCTGTGCTTCTCAGTTCTCTATCTG
ACCTCCTTGCTTAGGATTCTTGTTTTACCTTTTGCATAAAAGATTTTGGTTTCTAATTGTGACCTGATTACGCCAACAGTATGAAGACAACGGAAGGCCGCTCCTGACTG
GCATAACTACAGGACTGAGAGAGCTATTACAGTGAATTGACCAATGTTTTTGTGTGCTGAAGGTTTTTATGTAGATTTGCAGGCTTTCTGATCATTGATGCTGGATGTAT
ACTCTGGATATGGACCCTCAGCATGGATGGGCAAATGGACACAGCATGGGAGATTCAGAATTGTTTGGTAACAGAAAATTTTACCAAATGTTCTAGAACCAGAAAGCCTC
CATTGATAATTGGTAGAGGAAGGTGTTCCATACAGTTCTGAATAGAAGGATGGAGCAATAAAGACTTCAAAAGCGTTATCCATGGGTCAATTTATCTCCATCTTGGTGCT
GCCAATGTCAATAAGTTATCCATCATATTTTCTTCAATTCTTCTTCAAAAGGATTTTGTCGGAATTCTTCACAAGTTTCAGCTGGTCCATGGTCCTCCGAACGACACCGT
TTATTATTCATCGATCTTTCTTTTAAAGCAACTAAAGATCATTTATGGATGCATTATATGTGGGGTTTTGTGGAAGATTTGGGATGAAAGAAATGCAAGGATGTTGACAA
TGGACAAGAGACTTTGCTTCCTCTGAAAAGGAGGAAGATTAAAAATATCTCTTGCCGGGGCTACAGCTTGAGCTTACCAAAACCATCCTGATTTCTCTTTCACCATTCAT
CCCCTGCCATTTTTGATGGACTGCAGTGGCTCTATGGATTGGATCAAATTAATATTTGAAAAGAGAGAAATGAT
Protein sequenceShow/hide protein sequence
MPKLSLSHLSSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSFHRSDLTGSVQLEKQVSGCLDLSQGDSANVGREIVGRAWKALGAQGSCWGLARSGESVSVPYSTS
SRCYGQYDNRPNADTGRNLKSMSFVRGILEEDGKDFMGSSQFPGPPNMEHNADIVHLKMLRNNIFITVTDNKGNTKLKASAGRLEELKGGARMSRFAANTVAEYVGRESR
KLGLKSVVMRVKGFAFFKRKRQTIMSWRDGFTDSRSDQNPIVYVEDTTRRAHNGCRLRKQRRT