; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G009750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G009750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGolgi apparatus membrane protein TVP
Genome locationchr03:18852344..18855161
RNA-Seq ExpressionLsi03G009750
SyntenyLsi03G009750
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147506.1 uncharacterized protein LOC101214901 [Cucumis sativus]2.3e-3463.16Show/hide
Query:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET
        + VLEYWAGRGMLQIFVAVMTRAFPVYSVEQR+LILLQDAASYLLLACGAVYVVS                            GILCIGFLKRAREKKET
Subjt:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET

Query:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV
        AKD+VVKDLQ                        ELERQKQELEQLLISETV
Subjt:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV

XP_008454462.1 PREDICTED: uncharacterized protein LOC103494861 [Cucumis melo]2.3e-3463.16Show/hide
Query:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET
        + VLEYWAGRGMLQIFVAVMTRAFPVYSVEQR+LILLQDAASYLLLACGAVYVVS                            GILCIGFLKRAREKKET
Subjt:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET

Query:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV
        AKD+VVKDLQ                        ELERQKQELEQLLISETV
Subjt:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV

XP_022984240.1 uncharacterized protein LOC111482612 [Cucurbita maxima]1.1e-3159.21Show/hide
Query:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET
        + VLEYWAGRGMLQIFVAVMTRAFP YSVEQR+ ILLQ+AASYLLLACGAVYVVS                            GILCIGFLKRARE+KET
Subjt:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET

Query:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV
        +KDRVVKDLQ                        ELERQKQELEQLLIS++V
Subjt:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV

XP_038905258.1 uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida]5.2e-3457.14Show/hide
Query:  LFDAYF------IECFVL----PFSGMSYCYDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITL
        LFD  F      I CFV+     +  +   + VLEYWAGRGMLQIFVAVMTRAFPVYSVEQR+LILLQDAASYLLLACGAVYVVS               
Subjt:  LFDAYF------IECFVL----PFSGMSYCYDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITL

Query:  NGIFDSVFPTNFKGILCIGFLKRAREKKETAKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV
                     GILCIGFLKRARE+KETAKDRVVKDLQ                        ELERQKQELEQLLISETV
Subjt:  NGIFDSVFPTNFKGILCIGFLKRAREKKETAKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV

XP_038905259.1 uncharacterized protein LOC120091338 isoform X2 [Benincasa hispida]3.1e-3463.16Show/hide
Query:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET
        + VLEYWAGRGMLQIFVAVMTRAFPVYSVEQR+LILLQDAASYLLLACGAVYVVS                            GILCIGFLKRARE+KET
Subjt:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET

Query:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV
        AKDRVVKDLQ                        ELERQKQELEQLLISETV
Subjt:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV

TrEMBL top hitse value%identityAlignment
A0A0A0KYH6 Uncharacterized protein1.1e-3463.16Show/hide
Query:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET
        + VLEYWAGRGMLQIFVAVMTRAFPVYSVEQR+LILLQDAASYLLLACGAVYVVS                            GILCIGFLKRAREKKET
Subjt:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET

Query:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV
        AKD+VVKDLQ                        ELERQKQELEQLLISETV
Subjt:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV

A0A1S3BY74 uncharacterized protein LOC1034948611.1e-3463.16Show/hide
Query:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET
        + VLEYWAGRGMLQIFVAVMTRAFPVYSVEQR+LILLQDAASYLLLACGAVYVVS                            GILCIGFLKRAREKKET
Subjt:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET

Query:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV
        AKD+VVKDLQ                        ELERQKQELEQLLISETV
Subjt:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV

A0A6J1D697 uncharacterized protein LOC1110177041.3e-2754.25Show/hide
Query:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET
        + VLEYWAGRGMLQIFVAVMTRAFP YS +QR+LI+LQD ASYLLL CGAVYV S                            GILC+GFLKRARE+KET
Subjt:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET

Query:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELE-QLLISETV
        AK+R VKDLQ                        ELERQKQELE +LLI+E+V
Subjt:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELE-QLLISETV

A0A6J1E3M8 uncharacterized protein LOC1114304985.3e-3259.21Show/hide
Query:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET
        + VLEYWAGRGMLQIFVAVMTRAFP YSVEQR+ ILLQ+AASYLLLACGAVYVVS                            GILCIGFLKRARE+KET
Subjt:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET

Query:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV
        +KDRVVKDLQ                        ELERQKQELEQLLIS++V
Subjt:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV

A0A6J1J849 uncharacterized protein LOC1114826125.3e-3259.21Show/hide
Query:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET
        + VLEYWAGRGMLQIFVAVMTRAFP YSVEQR+ ILLQ+AASYLLLACGAVYVVS                            GILCIGFLKRARE+KET
Subjt:  YDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIGFLKRAREKKET

Query:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV
        +KDRVVKDLQ                        ELERQKQELEQLLIS++V
Subjt:  AKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33625.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 59 Blast hits to 59 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).2.5e-2644.65Show/hide
Query:  FVLPFSGMSYCYDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIG
        F+L FS       VLEYWAGRGMLQIFVAVMTRAFP Y  +++DL+LLQ+ ASYLLLACG +YV+S                            G+LCIG
Subjt:  FVLPFSGMSYCYDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIG

Query:  FLKRAREKKETAKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLI
        FLKRAR++KE ++++ VKDL+                        E+ R+K+ELEQLL+
Subjt:  FLKRAREKKETAKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLI

AT4G33625.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).5.6e-2644.65Show/hide
Query:  FVLPFSGMSYCYDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIG
        F+L FS       VLEYWAGRGMLQIFVAVMTRAFP Y  +++DL+LLQ+ ASYLLLACG +YV+S                            G+LCIG
Subjt:  FVLPFSGMSYCYDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVFPTNFKGILCIG

Query:  FLKRAREKKETAKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLI
        FLKRAR++KE ++++ VKDL                         E+ R+K+ELEQLL+
Subjt:  FLKRAREKKETAKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAGATCTTTTTATTTTATTTGATGCATATTTCATAGAATGTTTTGTCCTTCCGTTCTCTGGGATGTCATACTGCTACGATGTATTGGAATATTGGGCT
GGCCGGGGCATGTTGCAAATCTTTGTTGCAGTCATGACAAGAGCCTTCCCGGTGTATTCTGTAGAGCAGAGAGATCTTATTCTTCTTCAAGATGCTGCAAGTTAT
CTCCTCCTTGCCTGTGGTGCAGTCTATGTTGTATCGTGTATAAAATATGTGATTACATGCTTGTTTGCATGCATAACACTAAATGGCATATTTGATTCTGTTTTT
CCTACTAATTTCAAGGGAATACTGTGCATTGGGTTTCTCAAACGAGCTCGTGAAAAGAAAGAGACTGCAAAGGACAGGGTGGTCAAAGATCTTCAGGTAAGTTCT
TTTTATCGGATAGTTCTATATCTCATTGGGGATCGTAGGGCAAGGGCTCCATTCCTTTGTGTGGAGTTAGAAAGACAAAAGCAAGAACTTGAACAGTTGCTCATT
TCAGAAACTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAGATCTTTTTATTTTATTTGATGCATATTTCATAGAATGTTTTGTCCTTCCGTTCTCTGGGATGTCATACTGCTACGATGTATTGGAATATTGGGCT
GGCCGGGGCATGTTGCAAATCTTTGTTGCAGTCATGACAAGAGCCTTCCCGGTGTATTCTGTAGAGCAGAGAGATCTTATTCTTCTTCAAGATGCTGCAAGTTAT
CTCCTCCTTGCCTGTGGTGCAGTCTATGTTGTATCGTGTATAAAATATGTGATTACATGCTTGTTTGCATGCATAACACTAAATGGCATATTTGATTCTGTTTTT
CCTACTAATTTCAAGGGAATACTGTGCATTGGGTTTCTCAAACGAGCTCGTGAAAAGAAAGAGACTGCAAAGGACAGGGTGGTCAAAGATCTTCAGGTAAGTTCT
TTTTATCGGATAGTTCTATATCTCATTGGGGATCGTAGGGCAAGGGCTCCATTCCTTTGTGTGGAGTTAGAAAGACAAAAGCAAGAACTTGAACAGTTGCTCATT
TCAGAAACTGTTTGAAAATTTAAAGACATCCCCACGCACCAGAATATAATTGCACCTGATTCTCGCTTTGCTGCTGGGATTGTATGAGCATTTGTGCTACTTCGT
TTTGTACTCCACTATAATTGTCCTCTTAAGAGATCTACTCGTGTAAATTATGTCTAACTTGCCAATTTGTCCCTGCAGTGATCATGTAAATTCTGATTGTCTTGA
CAATGTAGACTGTGTTAACAAAAGAATTTGTCTATTGAGACAATAAATTAGTTCTTTGCTCTCTAAATTGAGGCTCTGCAAACTTCAGTGATCAAACGATGATAA
TGAACGGTCTCTATCACAGCAGGATCACATCCCTCATGTAAATATTTATGATGAATGTGCTTCTCAAGATGCTACAAAAGCC
Protein sequenceShow/hide protein sequence
MAKDLFILFDAYFIECFVLPFSGMSYCYDVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSCIKYVITCLFACITLNGIFDSVF
PTNFKGILCIGFLKRAREKKETAKDRVVKDLQVSSFYRIVLYLIGDRRARAPFLCVELERQKQELEQLLISETV