; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G009760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G009760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell;
Genome locationchr03:18856127..18856703
RNA-Seq ExpressionLsi03G009760
SyntenyLsi03G009760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147506.1 uncharacterized protein LOC101214901 [Cucumis sativus]3.8e-3782.08Show/hide
Query:  MERDGEGGPAAAAAA----SSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKN
        MER+GEG PA A AA    SSS QITRP R VDP LVTCRFFSVITALTAILCIVSNVISAIRSF+N+SDIFDGIFRCYAVV+AFF VLAETEWEFIFKN
Subjt:  MERDGEGGPAAAAAA----SSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKN

Query:  WKVFAF
        WKV  +
Subjt:  WKVFAF

XP_008454462.1 PREDICTED: uncharacterized protein LOC103494861 [Cucumis melo]3.8e-3781.73Show/hide
Query:  MERDGEGGPAA--AAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWK
        MER+GEG PAA  ++++SSS QITRP R VDP LVTCRFFSVITALTAILCIVSNVISAIRSF+N+SDIFDGIFRCYAVV+ FFVVLAETEWEFIFKNWK
Subjt:  MERDGEGGPAA--AAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWK

Query:  VFAF
        V  +
Subjt:  VFAF

XP_022922529.1 uncharacterized protein LOC111430498 [Cucurbita moschata]3.2e-3680Show/hide
Query:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW
        MER GEG   G  AAA A+SS Q +RP RRVDP LVTCRFFSV+TALTAILCIVSNVI+AIRSF+NKSDIFDGIFRCYAVV+AFFVVLAETEWEFI KNW
Subjt:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW

Query:  KVFAF
        KV  +
Subjt:  KVFAF

XP_023552581.1 uncharacterized protein LOC111810200 isoform X1 [Cucurbita pepo subsp. pepo]4.2e-3679.05Show/hide
Query:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW
        MER GEG   G  AAA A+SS Q +RP RRVDP LVTCRFFSV+TALTAILCIVSNV++AIRSF+NKSDIFDGIFRCYAVV+AFFVVLAETEWEFI KNW
Subjt:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW

Query:  KVFAF
        KV  +
Subjt:  KVFAF

XP_038905258.1 uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida]1.5e-3683.33Show/hide
Query:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVF
        MERDGEG P  AAAASSS Q  RP RRVDP LVTCRFFSV+TALTAILCIVSNVISAIRSF+NKSD+FDGIFRCYAVV+A FVVLAETEWEFI KNWKV 
Subjt:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVF

Query:  AF
         +
Subjt:  AF

TrEMBL top hitse value%identityAlignment
A0A0A0KYH6 Uncharacterized protein1.9e-3782.08Show/hide
Query:  MERDGEGGPAAAAAA----SSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKN
        MER+GEG PA A AA    SSS QITRP R VDP LVTCRFFSVITALTAILCIVSNVISAIRSF+N+SDIFDGIFRCYAVV+AFF VLAETEWEFIFKN
Subjt:  MERDGEGGPAAAAAA----SSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKN

Query:  WKVFAF
        WKV  +
Subjt:  WKVFAF

A0A1S3BY74 uncharacterized protein LOC1034948611.9e-3781.73Show/hide
Query:  MERDGEGGPAA--AAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWK
        MER+GEG PAA  ++++SSS QITRP R VDP LVTCRFFSVITALTAILCIVSNVISAIRSF+N+SDIFDGIFRCYAVV+ FFVVLAETEWEFIFKNWK
Subjt:  MERDGEGGPAA--AAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWK

Query:  VFAF
        V  +
Subjt:  VFAF

A0A6J1D697 uncharacterized protein LOC1110177048.3e-3067.89Show/hide
Query:  MERDGEGG-------PAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFI
        M +DGE         PAA++++SSS   TR  RRVDP LVTCRFFSV+TALTAILCIV NVISA+RSF++K+DIFDGIFRCYAV++A FVVLAETEWEFI
Subjt:  MERDGEGG-------PAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFI

Query:  FKNWKVFAF
         K WKV  +
Subjt:  FKNWKVFAF

A0A6J1E3M8 uncharacterized protein LOC1114304981.6e-3680Show/hide
Query:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW
        MER GEG   G  AAA A+SS Q +RP RRVDP LVTCRFFSV+TALTAILCIVSNVI+AIRSF+NKSDIFDGIFRCYAVV+AFFVVLAETEWEFI KNW
Subjt:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW

Query:  KVFAF
        KV  +
Subjt:  KVFAF

A0A6J1J849 uncharacterized protein LOC1114826122.7e-3680Show/hide
Query:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW
        MER GEG   G  AAA A+SS Q  RP RRVDP LVTCRFFSV+TALTAILCIVSNVI+AIRSF+NKSDIFDGIFRCYAVV+AFFVVLAETEWEFI KNW
Subjt:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW

Query:  KVFAF
        KV  +
Subjt:  KVFAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33625.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 59 Blast hits to 59 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).4.4e-2354.9Show/hide
Query:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVF
        M+R  E   + A  +S S ++ +   R DPFLV CR FS++T+L AILC+V NV++A+RSFR+  D+FDGIFRCYAVV+A FVVL ETEW FI K  KV 
Subjt:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVF

Query:  AF
         +
Subjt:  AF

AT4G33625.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).4.4e-2354.9Show/hide
Query:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVF
        M+R  E   + A  +S S ++ +   R DPFLV CR FS++T+L AILC+V NV++A+RSFR+  D+FDGIFRCYAVV+A FVVL ETEW FI K  KV 
Subjt:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVF

Query:  AF
         +
Subjt:  AF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGACGGAGAGGGAGGACCGGCAGCGGCGGCGGCGGCGTCGTCGTCTTGTCAGATCACCAGACCTAGTAGGAGGGTGGACCCTTTTCTTGTCACTTGCAGGTT
TTTCAGTGTTATAACAGCTCTCACTGCTATTCTCTGCATTGTTTCCAATGTTATCTCTGCGATTCGGTCCTTTAGGAACAAATCCGATATATTCGATGGTATATTTCGGT
GTTATGCAGTTGTGGTCGCATTCTTCGTGGTTCTTGCTGAGACGGAATGGGAATTTATTTTCAAGAACTGGAAGGTTTTTGCGTTTGAACCCTAA
mRNA sequenceShow/hide mRNA sequence
TTAACGCTATGAATTTGTCTTCTGCTGTTGGAACACTTGAGAACCCTCGAATGGAAAAAGTTCATCGATTCAATCATCATATTCACAACCAATCAGTAAGCTGAATCGCG
AGAGAGAATTTTCATCCGAGTTATAGATTCAGGGAAATTCATTGGAGCTGAGGAAATCTGTGGAAATGGAGAGAGACGGAGAGGGAGGACCGGCAGCGGCGGCGGCGGCG
TCGTCGTCTTGTCAGATCACCAGACCTAGTAGGAGGGTGGACCCTTTTCTTGTCACTTGCAGGTTTTTCAGTGTTATAACAGCTCTCACTGCTATTCTCTGCATTGTTTC
CAATGTTATCTCTGCGATTCGGTCCTTTAGGAACAAATCCGATATATTCGATGGTATATTTCGGTGTTATGCAGTTGTGGTCGCATTCTTCGTGGTTCTTGCTGAGACGG
AATGGGAATTTATTTTCAAGAACTGGAAGGTTTTTGCGTTTGAACCCTAA
Protein sequenceShow/hide protein sequence
MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVFAFEP