; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G009950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G009950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:19211746..19216192
RNA-Seq ExpressionLsi03G009950
SyntenyLsi03G009950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030919.1 hypothetical protein SDJN02_04956 [Cucurbita argyrosperma subsp. argyrosperma]9.5e-0681.82Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        V DTLEY SSRYLN TIPE MRVSRDG++IFAG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
XP_022942049.1 uncharacterized protein At3g49720-like [Cucurbita moschata]9.5e-0681.82Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        V DTLEY SSRYLN TIPE MRVSRDG++IFAG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
XP_022996876.1 uncharacterized protein At3g49720-like [Cucurbita maxima]9.5e-0681.82Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        V DTLEY SSRYLN TIPE MRVSRDG++IFAG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
XP_023547969.1 uncharacterized protein At3g49720-like [Cucurbita pepo subsp. pepo]9.5e-0681.82Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        V DTLEY SSRYLN TIPE MRVSRDG++IFAG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
XP_038905892.1 probable pectin methylesterase CGR3 [Benincasa hispida]1.1e-0673.81Show/hide
Query:  RSNMEAENKVEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        R N  +   + DTLEYFS RYLN+TIPELMRVSRDGVIIFAG
Subjt:  RSNMEAENKVEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
TrEMBL top hitse value%identityAlignment
A0A0A0L156 Uncharacterized protein7.8e-0682.35Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAGQ
        + DTLEYFSSRYLN+TI ELMRVSR+GVIIFAG+
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAGQ
A0A5A7TLX1 Uncharacterized protein1.0e-0584.85Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        + DTLEYFSSRYLN+TI ELMRVSR+GVIIFAG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
A0A5D3E063 Uncharacterized protein1.0e-0584.85Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        + DTLEYFSSRYLN+TI ELMRVSR+GVIIFAG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
A0A6J1FVH2 uncharacterized protein At3g49720-like4.6e-0681.82Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        V DTLEY SSRYLN TIPE MRVSRDG++IFAG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
A0A6J1K5Y9 uncharacterized protein At3g49720-like4.6e-0681.82Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        V DTLEY SSRYLN TIPE MRVSRDG++IFAG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
SwissProt top hitse value%identityAlignment
Q0WPN7 Probable pectin methylesterase CGR36.4e-0560.61Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        V D L+Y S RYLN T+PEL RV+ DGV++ AG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
Q9M2Y6 Probable pectin methylesterase CGR22.9e-0560.61Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        V D L+Y S +YLN T+PEL RV+ DGV++FAG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
Arabidopsis top hitse value%identityAlignment
AT3G49720.1 unknown protein2.0e-0660.61Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        V D L+Y S +YLN T+PEL RV+ DGV++FAG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
AT3G49720.2 unknown protein2.0e-0660.61Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        V D L+Y S +YLN T+PEL RV+ DGV++FAG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
AT5G65810.1 unknown protein4.5e-0660.61Show/hide
Query:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG
        V D L+Y S RYLN T+PEL RV+ DGV++ AG
Subjt:  VEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGTGGGCAGAGAAGCAATATGGAGGCTGAGAATAAAGTTGAAGATACTTTGGAATATTTCTCTTCACGATACCTTAACAACACAATTCCTGAGTTGATG
AGGGTATCTAGAGATGGAGTTATCATATTTGCTGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGCAAACAGAAACCATGCTTCAGGATTTTGACGGCCAAGTA
TCGATTGTTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATGTGGGCAGAGAAGCAATATGGAGGCTGAGAATAAAGTTGAAGATACTTTGGAATATTTCTCTTCACGATACCTTAACAACACAATTCCTGAGTTGATG
AGGGTATCTAGAGATGGAGTTATCATATTTGCTGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGCAAACAGAAACCATGCTTCAGGATTTTGACGGCCAAGTA
TCGATTGTTGGTTAG
Protein sequenceShow/hide protein sequence
MECGQRSNMEAENKVEDTLEYFSSRYLNNTIPELMRVSRDGVIIFAGQTPKSFVVEKQTETMLQDFDGQVSIVG