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Lsi03G010130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G010130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCysteine-rich and transmembrane domain-containing protein A-like
Genome locationchr03:19501714..19502078
RNA-Seq ExpressionLsi03G010130
SyntenyLsi03G010130
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044325.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]2.0e-2867.92Show/hide
Query:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
        QPPIGVPPPQ   +  +   F  F +                   F GYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
Subjt:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP

Query:  GCLEGW
        GCLEGW
Subjt:  GCLEGW

TYK29454.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]1.4e-2665.09Show/hide
Query:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
        QPPIGVPPPQ                                     GYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
Subjt:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP

Query:  GCLEGW
        GCLEGW
Subjt:  GCLEGW

XP_008454408.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]2.7e-2564.76Show/hide
Query:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
        QPPIGVPPPQ                                     GYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
Subjt:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP

Query:  GCLEG
        GCLEG
Subjt:  GCLEG

XP_011652909.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]6.6e-2464.15Show/hide
Query:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSG
        QPPIGVPPPQ                                     GYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ SSG
Subjt:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSG

Query:  PGCLEG
        PGCLEG
Subjt:  PGCLEG

XP_038905303.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]2.8e-2262.26Show/hide
Query:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSG
        QPPIGVPPPQ                                     GYPPEGYPKDAYPPPGYPPQGYPPPGAYPP GYPPPYAPQYAQ PPQQQ SSG
Subjt:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSG

Query:  PGCLEG
        PGCLEG
Subjt:  PGCLEG

TrEMBL top hitse value%identityAlignment
A0A0A0KWC5 Uncharacterized protein3.2e-2464.15Show/hide
Query:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSG
        QPPIGVPPPQ                                     GYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ SSG
Subjt:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSG

Query:  PGCLEG
        PGCLEG
Subjt:  PGCLEG

A0A1S3BZB4 cysteine-rich and transmembrane domain-containing protein A-like1.3e-2564.76Show/hide
Query:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
        QPPIGVPPPQ                                     GYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
Subjt:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP

Query:  GCLEG
        GCLEG
Subjt:  GCLEG

A0A5A7TSG5 Cysteine-rich and transmembrane domain-containing protein A-like9.6e-2967.92Show/hide
Query:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
        QPPIGVPPPQ   +  +   F  F +                   F GYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
Subjt:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP

Query:  GCLEGW
        GCLEGW
Subjt:  GCLEGW

A0A5D3E0V1 Cysteine-rich and transmembrane domain-containing protein A-like6.9e-2765.09Show/hide
Query:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
        QPPIGVPPPQ                                     GYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP
Subjt:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGP

Query:  GCLEGW
        GCLEGW
Subjt:  GCLEGW

A0A6J1D5E9 cysteine-rich and transmembrane domain-containing protein WIH2-like1.9e-2159.09Show/hide
Query:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQ
        QPPIGVPPPQ                                     GYPPEGYPKDA     YPP GYPPQGYPPPGAYP QGYPPPYAPQY QPPPQQ
Subjt:  QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQ

Query:  QSSGPGCLEG
        QSSGPGCLEG
Subjt:  QSSGPGCLEG

SwissProt top hitse value%identityAlignment
P24603 Rhodopsin9.9e-0768Show/hide
Query:  YPPEGYPKDAYPPP---GYPPQGYPPPGAYPPQGY-PPPYAPQYAQPPPQ
        YPP+GYP   YPPP   GYPPQGYPP G YPPQGY PPP  P    PPPQ
Subjt:  YPPEGYPKDAYPPP---GYPPQGYPPPGAYPPQGY-PPPYAPQYAQPPPQ

Q17094 Rhodopsin (Fragment)9.9e-0768Show/hide
Query:  YPPEGYPKDAYPPP---GYPPQGYPPPGAYPPQGY-PPPYAPQYAQPPPQ
        YPP+GYP   YPPP   GYPPQGYPP G YPPQGY PPP  P    PPPQ
Subjt:  YPPEGYPKDAYPPP---GYPPQGYPPPGAYPPQGY-PPPYAPQYAQPPPQ

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B3.4e-0760.56Show/hide
Query:  YPPEGYPKDAYPPPG--YPPQGYPPPGAYPPQGYPPP-YAPQ------YAQ---PPPQQQSS--GPGCLEG
        YP EG PKDAYPPPG  YP QGYPPP  YP QGYPP  Y PQ      Y Q   PP QQQ     PG LEG
Subjt:  YPPEGYPKDAYPPPG--YPPQGYPPPGAYPPQGYPPP-YAPQ------YAQ---PPPQQQSS--GPGCLEG

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH29.0e-1648.28Show/hide
Query:  SQPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYAQ
        +QPP+GVPPPQ                                     GYPPEGYPKDAYPP GYPPQGYP         P   YP QGYPPPYAPQY  
Subjt:  SQPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYAQ

Query:  PPP-QQQSSGPGCLEG
        PP  QQQ S PG LEG
Subjt:  PPP-QQQSSGPGCLEG

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH13.1e-0863.33Show/hide
Query:  PPEGY-PKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYAQPPPQQQSSG--PGCL
        PP+GY PKD YPP GYPP GYPPPG    YP QGYPP   PQY+Q P Q+Q++G   GCL
Subjt:  PPEGY-PKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYAQPPPQQQSSG--PGCL

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein6.4e-1748.28Show/hide
Query:  SQPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYAQ
        +QPP+GVPPPQ                                     GYPPEGYPKDAYPP GYPPQGYP         P   YP QGYPPPYAPQY  
Subjt:  SQPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYAQ

Query:  PPP-QQQSSGPGCLEG
        PP  QQQ S PG LEG
Subjt:  PPP-QQQSSGPGCLEG

AT3G49845.1 unknown protein1.9e-0550.7Show/hide
Query:  GYPPEGYPKDA-YPPP-----GYPPQGYPPP-----GAYPPQGYPPPYAPQ-------YAQPPPQQQSSGP
        GYPP GYP  A YPPP     GYPP GYPPP       YP QGYPPP  PQ       Y  PPP      P
Subjt:  GYPPEGYPKDA-YPPP-----GYPPQGYPPP-----GAYPPQGYPPPYAPQ-------YAQPPPQQQSSGP

AT5G45350.1 proline-rich family protein1.0e-0660Show/hide
Query:  FLGYPPEGY-PKDAYPPPGYPPQGY-PPPGAYPPQGYPP----------PYAPQYAQPPP
        F GYPP GY P  AYPP GYP QGY PPPGAYPP GYPP          P AP Y   PP
Subjt:  FLGYPPEGY-PKDAYPPPGYPPQGY-PPPGAYPPQGYPP----------PYAPQYAQPPP

AT5G45350.2 proline-rich family protein1.0e-0660Show/hide
Query:  FLGYPPEGY-PKDAYPPPGYPPQGY-PPPGAYPPQGYPP----------PYAPQYAQPPP
        F GYPP GY P  AYPP GYP QGY PPPGAYPP GYPP          P AP Y   PP
Subjt:  FLGYPPEGY-PKDAYPPPGYPPQGY-PPPGAYPPQGYPP----------PYAPQYAQPPP

AT5G67600.1 unknown protein2.2e-0963.33Show/hide
Query:  PPEGY-PKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYAQPPPQQQSSG--PGCL
        PP+GY PKD YPP GYPP GYPPPG    YP QGYPP   PQY+Q P Q+Q++G   GCL
Subjt:  PPEGY-PKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYAQPPPQQQSSG--PGCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCAGCCTCCGATTGGAGTGCCTCCACCTCAAGGTAATTTAATTCACTGTTTCTGTTGTGATTTTGGTGTTTTTGGTGTTGGATCGGAGGGTTTTGTGATGTGCGA
TTGTAGATCTGTGGTTTTGGTGGTGGTTTCTTTCTTAGGTTATCCACCAGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGCTATCCTCCGC
CCGGTGCTTATCCGCCGCAGGGATATCCCCCGCCTTACGCTCCTCAGTACGCTCAGCCTCCTCCTCAACAGCAAAGTAGCGGCCCCGGTTGCTTGGAAGGCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCAGCCTCCGATTGGAGTGCCTCCACCTCAAGGTAATTTAATTCACTGTTTCTGTTGTGATTTTGGTGTTTTTGGTGTTGGATCGGAGGGTTTTGTGATGTGCGA
TTGTAGATCTGTGGTTTTGGTGGTGGTTTCTTTCTTAGGTTATCCACCAGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGCTATCCTCCGC
CCGGTGCTTATCCGCCGCAGGGATATCCCCCGCCTTACGCTCCTCAGTACGCTCAGCCTCCTCCTCAACAGCAAAGTAGCGGCCCCGGTTGCTTGGAAGGCTGGTAA
Protein sequenceShow/hide protein sequence
MSQPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW