; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G010170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G010170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:19573276..19575534
RNA-Seq ExpressionLsi03G010170
SyntenyLsi03G010170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014938.1 hypothetical protein SDJN02_22569, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-9881.94Show/hide
Query:  MEFTITVHRIPLNFSPIHRTLTKIH----ASSKCPDSQLPLPSKS------LITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIG
        ME T+ +  IP NFSPIHR LTK H    +SSK P+ QLPLPSKS      LI PRGE  PTM+EI+AAGEAQN+ LRLQTLGPFFRITAKSLESQREIG
Subjt:  MEFTITVHRIPLNFSPIHRTLTKIH----ASSKCPDSQLPLPSKS------LITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIG

Query:  KAEGLIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVW
        KAEGLIRVWLRGRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSK+ DIGDMLVW
Subjt:  KAEGLIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVW

Query:  GGIGTRMDADIKALLFKWCTRFKSPSS
        GG+GTRMDA I+ALL KWC+RFKS SS
Subjt:  GGIGTRMDADIKALLFKWCTRFKSPSS

XP_008454398.1 PREDICTED: uncharacterized protein LOC103494815 [Cucumis melo]1.5e-10285.71Show/hide
Query:  FTITVHRIPLNFSPIHRTLTKIHA--SSKCPDSQLPLPSKSLITPRGE---NIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIGKAEGLIR
        FTIT+ RIP   SPIHRTLTKIHA  SSK P+SQLPLPSKSLIT RG+   NIPTM+EI+AAGE+QNL LRLQTLGPFFRITAKSLE++REIGKAEGL+R
Subjt:  FTITVHRIPLNFSPIHRTLTKIHA--SSKCPDSQLPLPSKSLITPRGE---NIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIGKAEGLIR

Query:  VWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVWGGIGTRM
        VWL G+ILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSKL+DIGDM+VWGGIGTRM
Subjt:  VWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVWGGIGTRM

Query:  DADIKALLFKWCTRFKSPSSNPQN
        DA I++LL KWCTRFKSPSS+ QN
Subjt:  DADIKALLFKWCTRFKSPSSNPQN

XP_022922749.1 uncharacterized protein LOC111430648 [Cucurbita moschata]3.9e-9881.94Show/hide
Query:  MEFTITVHRIPLNFSPIHRTLTKIH----ASSKCPDSQLPLPSKS------LITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIG
        ME T+ + RIP NF PIHR LTK H    +SSK P+ QLPLPSKS      LI PRGE  PTM+EI+AAGEAQN+ LRLQTLGPFFRITAKSLESQREIG
Subjt:  MEFTITVHRIPLNFSPIHRTLTKIH----ASSKCPDSQLPLPSKS------LITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIG

Query:  KAEGLIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVW
        KAEGLIRVWLRGRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSK+ DIGDMLVW
Subjt:  KAEGLIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVW

Query:  GGIGTRMDADIKALLFKWCTRFKSPSS
        GG+GTRMDA I+ALL KWC+RFKS SS
Subjt:  GGIGTRMDADIKALLFKWCTRFKSPSS

XP_023521663.1 uncharacterized protein LOC111785501 [Cucurbita pepo subsp. pepo]1.7e-9881.94Show/hide
Query:  MEFTITVHRIPLNFSPIHRTLTKIH----ASSKCPDSQLPLPSKS------LITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIG
        ME T+ + RIP NFSPIHR LTK H    +SSK P+ QLPLPSKS      LI PRGE  PTM+EI+AAGEAQN+ LRLQTLGPFFRITAKSLESQREIG
Subjt:  MEFTITVHRIPLNFSPIHRTLTKIH----ASSKCPDSQLPLPSKS------LITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIG

Query:  KAEGLIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVW
        KAEGLIRVWLRGRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGC+TAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSK+ DIGDMLVW
Subjt:  KAEGLIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVW

Query:  GGIGTRMDADIKALLFKWCTRFKSPSS
        GG+GTRMDA I+ALL KWC+RFKS SS
Subjt:  GGIGTRMDADIKALLFKWCTRFKSPSS

XP_038903453.1 uncharacterized protein LOC120090038 [Benincasa hispida]1.7e-11490.52Show/hide
Query:  MEFTITVHRIPLNFSPIHRTLT-KIHASSKCPDSQLPLPSKSLITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIGKAEGLIRVW
        MEFTI + RIP NFSPIHRTL  KIHASSKCP+SQLPLPSKSLITP  ENIPTMSEI+AAG+AQNL LRLQTLGPFFRITAKSLESQREIGKAEGL+RVW
Subjt:  MEFTITVHRIPLNFSPIHRTLT-KIHASSKCPDSQLPLPSKSLITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIGKAEGLIRVW

Query:  LRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVWGGIGTRMDA
        LRG+ILHL+SIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSG+KL DIGDMLVWGGIGTRMDA
Subjt:  LRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVWGGIGTRMDA

Query:  DIKALLFKWCTRFKSPSSNPQNSHSLLQTNLH
        DIKALL KWCTRFK PSSNPQNSH LLQTN H
Subjt:  DIKALLFKWCTRFKSPSSNPQNSHSLLQTNLH

TrEMBL top hitse value%identityAlignment
A0A0A0KT41 Uncharacterized protein7.4e-9584.98Show/hide
Query:  FTITVHRIPLNFSPIHRTLTKIHA--SSKCPDSQLPLPSKSLITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWL
        FTIT+ RIP   SPIHRTLTKIHA  SSK P+SQLPLPSK        NIPTM+EI+AAGEAQNL LRLQTLGPFFRITAKSL ++REIGKAEGL+RVWL
Subjt:  FTITVHRIPLNFSPIHRTLTKIHA--SSKCPDSQLPLPSKSLITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWL

Query:  RGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVWGGIGTRMDAD
         G+ILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSKL+DIGDMLVWGGIGTRMDA 
Subjt:  RGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVWGGIGTRMDAD

Query:  IKALLFKWCTRFK
        I +LL KWCTRFK
Subjt:  IKALLFKWCTRFK

A0A1S3BZR1 uncharacterized protein LOC1034948157.4e-10385.71Show/hide
Query:  FTITVHRIPLNFSPIHRTLTKIHA--SSKCPDSQLPLPSKSLITPRGE---NIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIGKAEGLIR
        FTIT+ RIP   SPIHRTLTKIHA  SSK P+SQLPLPSKSLIT RG+   NIPTM+EI+AAGE+QNL LRLQTLGPFFRITAKSLE++REIGKAEGL+R
Subjt:  FTITVHRIPLNFSPIHRTLTKIHA--SSKCPDSQLPLPSKSLITPRGE---NIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIGKAEGLIR

Query:  VWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVWGGIGTRM
        VWL G+ILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSKL+DIGDM+VWGGIGTRM
Subjt:  VWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVWGGIGTRM

Query:  DADIKALLFKWCTRFKSPSSNPQN
        DA I++LL KWCTRFKSPSS+ QN
Subjt:  DADIKALLFKWCTRFKSPSSNPQN

A0A6J1D616 uncharacterized protein LOC1110176374.6e-9783.26Show/hide
Query:  MEFTITVHRIPLNFSPIHRTLTKIHA----SSKCPDSQLPLPSKS--LITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIGKAEG
        MEFT T+ RIP NFSPI R L+KIHA    SSKCP+SQLP PSKS   +  R +NIPTM EI+AAG AQNL LRLQTLGPFFRITAKS ESQREIGKAEG
Subjt:  MEFTITVHRIPLNFSPIHRTLTKIHA----SSKCPDSQLPLPSKS--LITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIGKAEG

Query:  LIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVWGGIG
        LIRVW  GRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSK+ D GDMLVWGG+G
Subjt:  LIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVWGGIG

Query:  TRMDADIKALLFKWCTRFKSP
        TRMDADI+ LL KWCTRFKSP
Subjt:  TRMDADIKALLFKWCTRFKSP

A0A6J1E4B2 uncharacterized protein LOC1114306481.9e-9881.94Show/hide
Query:  MEFTITVHRIPLNFSPIHRTLTKIH----ASSKCPDSQLPLPSKS------LITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIG
        ME T+ + RIP NF PIHR LTK H    +SSK P+ QLPLPSKS      LI PRGE  PTM+EI+AAGEAQN+ LRLQTLGPFFRITAKSLESQREIG
Subjt:  MEFTITVHRIPLNFSPIHRTLTKIH----ASSKCPDSQLPLPSKS------LITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIG

Query:  KAEGLIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVW
        KAEGLIRVWLRGRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSK+ DIGDMLVW
Subjt:  KAEGLIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVW

Query:  GGIGTRMDADIKALLFKWCTRFKSPSS
        GG+GTRMDA I+ALL KWC+RFKS SS
Subjt:  GGIGTRMDADIKALLFKWCTRFKSPSS

A0A6J1JB84 uncharacterized protein LOC1114828885.5e-9881.06Show/hide
Query:  MEFTITVHRIPLNFSPIHRTLTKIH----ASSKCPDSQLPLPS------KSLITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIG
        ME T+ + RIP NFSPIHR LTK H    +SSK P+ QLPLPS      K+LI PRGE  PTM+EI+AAGEAQN+ LRLQTLGPFFRITAKSLESQREIG
Subjt:  MEFTITVHRIPLNFSPIHRTLTKIH----ASSKCPDSQLPLPS------KSLITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIG

Query:  KAEGLIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVW
        KAEGLIRVWLRGRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGF+++YEVSGS + DIGDMLVW
Subjt:  KAEGLIRVWLRGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVW

Query:  GGIGTRMDADIKALLFKWCTRFKSPSS
        GG+GTRMDA I+ LLFKWC+RFKS SS
Subjt:  GGIGTRMDADIKALLFKWCTRFKSPSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCACAATCACAGTTCACCGAATCCCTCTAAATTTCTCCCCAATTCACAGAACCCTAACTAAAATCCACGCCTCATCCAAATGCCCTGATTCACAATTACCCCT
TCCATCAAAATCCCTAATCACTCCAAGAGGCGAAAACATTCCGACGATGTCGGAGATTATGGCGGCTGGCGAGGCCCAGAATCTGCACCTCCGGCTGCAAACTTTGGGGC
CGTTTTTCCGAATAACAGCGAAAAGCTTGGAATCGCAGCGGGAGATCGGGAAGGCGGAGGGTTTGATAAGAGTGTGGTTGCGAGGGAGAATTCTTCATCTGGATTCGATT
CGATTGAACAGAGAAAGCTTGGGAATGGAGAAATCGATCTTTGGACTCGGATTGTTCATCGGCGCTGTTGCGATACGGTATGGGTATGATTGCGGTTGCAAGACGGCGGA
GTTATTGGCCATCAATGACTCCGATCTTTACCATTCCAAGCTGGTTAGATTCTACACAAGGATCGGGTTCAAGACAATGTATGAAGTGAGTGGTTCAAAGTTAAGGGACA
TTGGAGACATGTTGGTGTGGGGAGGTATTGGAACTAGAATGGATGCTGACATTAAAGCCCTTCTATTTAAATGGTGTACAAGGTTCAAATCCCCATCATCTAACCCACAA
AATTCCCACTCTTTGCTTCAAACTAATCTTCATTAG
mRNA sequenceShow/hide mRNA sequence
AAAATATTTAAAATAAAAAAAAATTGAAAAAAATAATAACAAAGAAACACCTTCTCCCAATTTGCATTTCCTTGCTCCCTCGACTCCATGAGTACGAGTGAATCAAACTC
CCGCCATTAATGGAGTTCACAATCACAGTTCACCGAATCCCTCTAAATTTCTCCCCAATTCACAGAACCCTAACTAAAATCCACGCCTCATCCAAATGCCCTGATTCACA
ATTACCCCTTCCATCAAAATCCCTAATCACTCCAAGAGGCGAAAACATTCCGACGATGTCGGAGATTATGGCGGCTGGCGAGGCCCAGAATCTGCACCTCCGGCTGCAAA
CTTTGGGGCCGTTTTTCCGAATAACAGCGAAAAGCTTGGAATCGCAGCGGGAGATCGGGAAGGCGGAGGGTTTGATAAGAGTGTGGTTGCGAGGGAGAATTCTTCATCTG
GATTCGATTCGATTGAACAGAGAAAGCTTGGGAATGGAGAAATCGATCTTTGGACTCGGATTGTTCATCGGCGCTGTTGCGATACGGTATGGGTATGATTGCGGTTGCAA
GACGGCGGAGTTATTGGCCATCAATGACTCCGATCTTTACCATTCCAAGCTGGTTAGATTCTACACAAGGATCGGGTTCAAGACAATGTATGAAGTGAGTGGTTCAAAGT
TAAGGGACATTGGAGACATGTTGGTGTGGGGAGGTATTGGAACTAGAATGGATGCTGACATTAAAGCCCTTCTATTTAAATGGTGTACAAGGTTCAAATCCCCATCATCT
AACCCACAAAATTCCCACTCTTTGCTTCAAACTAATCTTCATTAGCCCTTTCTCTTATGTTCTACTAGTAATGTGCACATTTTGTTAACTTGTAAGTAAGATGTATCATA
TATGTATGCATAGTTCATACTTATCTTAAAAAGGATAGTGTTTGTTTATATGTTACTTAGACTTTTTCGATTTTTTTTGTTTAATCTAATTGATTTTAGAAGTGTCCATT
TTTCTCGTGAGGAATGAAGAGAAAGTGGGAGACAATAATTTTATGTAGGTTAATCTCG
Protein sequenceShow/hide protein sequence
MEFTITVHRIPLNFSPIHRTLTKIHASSKCPDSQLPLPSKSLITPRGENIPTMSEIMAAGEAQNLHLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILHLDSI
RLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLRDIGDMLVWGGIGTRMDADIKALLFKWCTRFKSPSSNPQ
NSHSLLQTNLH