CuGenDBv2

Gene ID	Lsi03G010690
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	phytochrome A-associated F-box protein
Genome location	chr03:20499018..20500197
RNA-Seq Expression	Lsi03G010690
Synteny	Lsi03G010690
Gene Ontology terms	GO:0009585 - red, far-red light phototransduction (biological process) GO:0010099 - regulation of photomorphogenesis (biological process) GO:0048366 - leaf development (biological process) GO:0048573 - photoperiodism, flowering (biological process) GO:0005634 - nucleus (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily IPR040267 - F-box protein EID1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044375.1 phytochrome A-associated F-box protein [Cucumis melo var. makuwa]

2.6e-187

94.89

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Query:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MA SLFS+LP+DILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLV+DLLVGDSIPAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYMKLGLSNYPEPESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKI
        ERELGPDENYMKLG S + +PESDP  STALFEVNSDL  SASASASDCAWSLYDDLYLDTMYNDSEAPDV+DPQIG TKVEKGVFM DREFCVSKRRKI
Subjt:  ERELGPDENYMKLGLSNYPEPESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKI

Query:  CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
        CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
Subjt:  CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

XP_011652932.1 phytochrome A-associated F-box protein [Cucumis sativus]

7.5e-195

88.98

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Query:  MQMVRKGQSTTFITDPFVFNFN----TLSSNPISSSL---FTNPSFPMADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN
        MQM++K  +TT  T PF F+ +    +LSS+  SSSL   F+ P FPMADSLFS+LPDDILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWKTKCSN
Subjt:  MQMVRKGQSTTFITDPFVFNFN----TLSSNPISSSL---FTNPSFPMADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN

Query:  AIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYMKLGLSNYPEPESDP-STALFEVNSDL----SASASASDCAWS
        AIPSLV+DLLVGDSIPAGGWASLHKLAVCCPGL+HSGVLLENSDFGLERELGPDENYMKLG S Y +PES+P STALFEVNSDL    SASASASDCAWS
Subjt:  AIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYMKLGLSNYPEPESDP-STALFEVNSDL----SASASASDCAWS

Query:  LYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYML
        LYDDLYLDTMYNDSEAPDV+DPQIG TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYML
Subjt:  LYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYML

Query:  FRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        FRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  FRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

XP_016901491.1 PREDICTED: phytochrome A-associated F-box protein [Cucumis melo]

4.0e-188

95.2

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Query:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MADSLFS+LP+DILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLV+DLLVGDSIPAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYMKLGLSNYPEPESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKI
        ERELGPDENYMKLG S + +PESDP  STALFEVNSDL  SASASASDCAWSLYDDLYLDTMYNDSEAPDV+DPQIG TKVEKGVFM DREFCVSKRRKI
Subjt:  ERELGPDENYMKLGLSNYPEPESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKI

Query:  CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
        CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
Subjt:  CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

XP_022155270.1 phytochrome A-associated F-box protein isoform X1 [Momordica charantia]

8.6e-175

80.05

Show/hide

Query:  MQMVRKGQSTTFITDPFV---FNFNTLSSNPISSSLFTNP----SFPMADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN
        MQM R  + T F   P      +++ L+   + +  F++     S  MA+S FS+LP+D+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS 
Subjt:  MQMVRKGQSTTFITDPFV---FNFNTLSSNPISSSLFTNP----SFPMADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN

Query:  AIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYMKLGLSNYPEPESDPSTALFEVNSDLSASASASDCAWSLYDDL
        AIPSL+ADL+VGDS+PAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENY++L  S +P+P++D     F+VNSD SASAS SDCAWSLYDDL
Subjt:  AIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYMKLGLSNYPEPESDPSTALFEVNSDLSASASASDCAWSLYDDL

Query:  YLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIF
        YLDT+YNDSEAPDV DPQIG TKVEKGVFM DREF  SKRRKI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIF
Subjt:  YLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIF

Query:  KNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        KNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  KNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

XP_038905727.1 phytochrome A-associated F-box protein [Benincasa hispida]

2.1e-189

94.66

Show/hide

Query:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MADSLFS+LPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYMKLGLSNYPEPESDPSTALFEVNSDL--------SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSK
        ERELGPDENYMKL  S+ PEPESDPSTALFEVNSDL        SASASASDCAWSLYDDLYLDTMYNDSEAPDV+DPQIGVTKVEKGVFMTD++FCVSK
Subjt:  ERELGPDENYMKLGLSNYPEPESDPSTALFEVNSDL--------SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSK

Query:  RRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAF
        RRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNR KIDLNCAFCSCKETWDLHSAF
Subjt:  RRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAF

Query:  CLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        CLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  CLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWJ3 Uncharacterized protein

1.1e-188

95.21

Show/hide

Query:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MADSLFS+LPDDILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWKTKCSNAIPSLV+DLLVGDSIPAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYMKLGLSNYPEPESDP-STALFEVNSDL----SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRK
        ERELGPDENYMKLG S Y +PES+P STALFEVNSDL    SASASASDCAWSLYDDLYLDTMYNDSEAPDV+DPQIG TKVEKGVFMTDREFCVSKRRK
Subjt:  ERELGPDENYMKLGLSNYPEPESDP-STALFEVNSDL----SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRK

Query:  ICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR
        ICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR
Subjt:  ICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR

Query:  RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

A0A1S4DZU2 phytochrome A-associated F-box protein

1.9e-188

95.2

Show/hide

Query:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MADSLFS+LP+DILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLV+DLLVGDSIPAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYMKLGLSNYPEPESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKI
        ERELGPDENYMKLG S + +PESDP  STALFEVNSDL  SASASASDCAWSLYDDLYLDTMYNDSEAPDV+DPQIG TKVEKGVFM DREFCVSKRRKI
Subjt:  ERELGPDENYMKLGLSNYPEPESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKI

Query:  CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
        CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
Subjt:  CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

A0A5A7TSM0 Phytochrome A-associated F-box protein

1.2e-187

94.89

Show/hide

Query:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MA SLFS+LP+DILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLV+DLLVGDSIPAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYMKLGLSNYPEPESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKI
        ERELGPDENYMKLG S + +PESDP  STALFEVNSDL  SASASASDCAWSLYDDLYLDTMYNDSEAPDV+DPQIG TKVEKGVFM DREFCVSKRRKI
Subjt:  ERELGPDENYMKLGLSNYPEPESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKI

Query:  CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
        CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
Subjt:  CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

A0A5D3E0Q4 Phytochrome A-associated F-box protein

1.9e-188

95.2

Show/hide

Query:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL
        MADSLFS+LP+DILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLV+DLLVGDSIPAGGWASLHKLAVCCPGL+HSGVLLENSDFGL
Subjt:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGL

Query:  ERELGPDENYMKLGLSNYPEPESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKI
        ERELGPDENYMKLG S + +PESDP  STALFEVNSDL  SASASASDCAWSLYDDLYLDTMYNDSEAPDV+DPQIG TKVEKGVFM DREFCVSKRRKI
Subjt:  ERELGPDENYMKLGLSNYPEPESDP--STALFEVNSDL--SASASASDCAWSLYDDLYLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKI

Query:  CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
        CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR
Subjt:  CRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR

Query:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

A0A6J1DLZ5 phytochrome A-associated F-box protein isoform X1

4.1e-175

80.05

Show/hide

Query:  MQMVRKGQSTTFITDPFV---FNFNTLSSNPISSSLFTNP----SFPMADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN
        MQM R  + T F   P      +++ L+   + +  F++     S  MA+S FS+LP+D+LLNIFFKLEDDPRNWARLACVSTKFSST+RN+CWKTKCS 
Subjt:  MQMVRKGQSTTFITDPFV---FNFNTLSSNPISSSLFTNP----SFPMADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN

Query:  AIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYMKLGLSNYPEPESDPSTALFEVNSDLSASASASDCAWSLYDDL
        AIPSL+ADL+VGDS+PAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENY++L  S +P+P++D     F+VNSD SASAS SDCAWSLYDDL
Subjt:  AIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYMKLGLSNYPEPESDPSTALFEVNSDLSASASASDCAWSLYDDL

Query:  YLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIF
        YLDT+YNDSEAPDV DPQIG TKVEKGVFM DREF  SKRRKI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIF
Subjt:  YLDTMYNDSEAPDVVDPQIGVTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIF

Query:  KNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
        KNFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Subjt:  KNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

SwissProt top hits

e value

%identity

Alignment

Q8LEA8 Phytochrome A-associated F-box protein

1.9e-121

62.46

Show/hide

Query:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLL--------------VGDS--IPAGGWASLHKLAVCCP
        MA+S+FS +P+D++ NIFFKL+DDPRNWARLACV TKFSS +RN+C KT+C +AIP++++DLL                DS   P GGWASL+KLAVCCP
Subjt:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLL--------------VGDS--IPAGGWASLHKLAVCCP

Query:  GLLHSGVLLENSDFGLERELGPDENYMKLGLSNYPEPESDPSTALFEVNSDLSASASASDCAWSLYDDLYLDTMYNDSEAP---DVVDPQIGVTKVEKGV
        GL H+G+LLENSDFGLERELGPD+N         P+P +       E  S    S   +   WSLYDDLY DT+     AP   D +D Q    ++E   
Subjt:  GLLHSGVLLENSDFGLERELGPDENYMKLGLSNYPEPESDPSTALFEVNSDLSASASASDCAWSLYDDLYLDTMYNDSEAP---DVVDPQIGVTKVEKGV

Query:  FMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-LNCAFC
            R+  V KRRKICRS+ SHLASG WNLSREQGNKLL SRFRGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L CAFC
Subjt:  FMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-LNCAFC

Query:  SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
         C ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Subjt:  SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

Q9LF38 EID1-like F-box protein 1

2.1e-06

34.92

Show/hide

Query:  SREQGNKLLRSRFRGDSLYICDWPGCVHIE--EKRNYMLFRGIFKNFKGSHVWRTI--KDGNRNKIDLNCAFCSCKETWDLHSA------FCLRRVFGYH
        SR  G  LL  + R D LY+CD   C H++  E+ +  LFRGIFK+F  S V + I  K    +  ++ C +C  K  W +  A       C+ R+  Y 
Subjt:  SREQGNKLLRSRFRGDSLYICDWPGCVHIE--EKRNYMLFRGIFKNFKGSHVWRTI--KDGNRNKIDLNCAFCSCKETWDLHSA------FCLRRVFGYH

Query:  DDGEPVVRAYVCENGHVSGAWTDLPL
        D     +  +VC NGH+ G  T  PL
Subjt:  DDGEPVVRAYVCENGHVSGAWTDLPL

Arabidopsis top hits

e value

%identity

Alignment

AT4G02440.1 F-box family protein

1.4e-122

62.46

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Query:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLL--------------VGDS--IPAGGWASLHKLAVCCP
        MA+S+FS +P+D++ NIFFKL+DDPRNWARLACV TKFSS +RN+C KT+C +AIP++++DLL                DS   P GGWASL+KLAVCCP
Subjt:  MADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADLL--------------VGDS--IPAGGWASLHKLAVCCP

Query:  GLLHSGVLLENSDFGLERELGPDENYMKLGLSNYPEPESDPSTALFEVNSDLSASASASDCAWSLYDDLYLDTMYNDSEAP---DVVDPQIGVTKVEKGV
        GL H+G+LLENSDFGLERELGPD+N         P+P +       E  S    S   +   WSLYDDLY DT+     AP   D +D Q    ++E   
Subjt:  GLLHSGVLLENSDFGLERELGPDENYMKLGLSNYPEPESDPSTALFEVNSDLSASASASDCAWSLYDDLYLDTMYNDSEAP---DVVDPQIGVTKVEKGV

Query:  FMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-LNCAFC
            R+  V KRRKICRS+ SHLASG WNLSREQGNKLL SRFRGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L CAFC
Subjt:  FMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-LNCAFC

Query:  SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
         C ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Subjt:  SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

AT5G15440.1 EID1-like 1

1.5e-07

34.92

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Query:  SREQGNKLLRSRFRGDSLYICDWPGCVHIE--EKRNYMLFRGIFKNFKGSHVWRTI--KDGNRNKIDLNCAFCSCKETWDLHSA------FCLRRVFGYH
        SR  G  LL  + R D LY+CD   C H++  E+ +  LFRGIFK+F  S V + I  K    +  ++ C +C  K  W +  A       C+ R+  Y 
Subjt:  SREQGNKLLRSRFRGDSLYICDWPGCVHIE--EKRNYMLFRGIFKNFKGSHVWRTI--KDGNRNKIDLNCAFCSCKETWDLHSA------FCLRRVFGYH

Query:  DDGEPVVRAYVCENGHVSGAWTDLPL
        D     +  +VC NGH+ G  T  PL
Subjt:  DDGEPVVRAYVCENGHVSGAWTDLPL

AT5G15440.1 EID1-like 1

2.8e-06

32.14

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Query:  LPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADL-LVGDSIPAGGWASLHKLAVCCPGLLHSGV
        L +D+LL +F  L  +P+  A L+CV   F    + + WK  C    P ++ DL   G     G W +L KL + C G    G+
Subjt:  LPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVADL-LVGDSIPAGGWASLHKLAVCCPGLLHSGV

Sequences

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CDS sequence

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ATGGCTGTTGGGGAATTTGTGTGGACGCAAAACCAGAGAGGTTTTGTGTGGATGCAAATGGTGAGGAAAGGACAGTCTACCACTTTCATCACCGATCCCTTCGTCTTCAA
CTTCAACACTCTCTCTTCCAATCCAATCTCATCATCTCTATTCACAAACCCTTCTTTTCCCATGGCCGATTCCCTCTTCTCTTCCCTTCCCGACGACATTCTTCTCAACA
TCTTCTTCAAGCTTGAAGACGATCCCCGTAACTGGGCTCGATTAGCTTGTGTTTCCACCAAATTTTCCTCTACAATCCGTAACATCTGCTGGAAAACCAAGTGTTCCAAC
GCCATCCCTTCTCTCGTTGCCGATCTTCTCGTCGGCGACTCTATTCCCGCTGGTGGATGGGCTTCCCTTCATAAGCTCGCTGTCTGTTGTCCAGGTCTTCTCCATTCCGG
TGTTCTTCTCGAGAATTCTGATTTTGGGCTCGAGCGCGAGCTGGGTCCTGATGAAAATTACATGAAATTGGGTTTATCTAACTACCCAGAGCCCGAATCGGACCCTTCTA
CTGCTCTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGATGATCTGTATCTCGATACTATGTATAACGATTCTGAA
GCCCCTGATGTTGTCGACCCTCAAATCGGTGTTACCAAAGTGGAGAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCGAAGAGGAGGAAGATCTGTAGGTCTAT
GAGGTCGCATTTGGCATCTGGGGTTTGGAATTTAAGCAGGGAACAAGGAAATAAGCTGCTACGGAGCCGATTTCGAGGCGATTCTCTTTACATTTGTGATTGGCCTGGAT
GTGTTCACATTGAAGAGAAGCGGAATTACATGCTTTTCAGAGGGATTTTCAAGAACTTCAAAGGATCTCATGTTTGGAGAACGATAAAAGATGGGAACAGGAACAAAATT
GATCTGAACTGTGCGTTTTGCTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGAGAGCCAGTTGTTCGAGC
TTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGA

mRNA sequence

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Protein sequence

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MAVGEFVWTQNQRGFVWMQMVRKGQSTTFITDPFVFNFNTLSSNPISSSLFTNPSFPMADSLFSSLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSN
AIPSLVADLLVGDSIPAGGWASLHKLAVCCPGLLHSGVLLENSDFGLERELGPDENYMKLGLSNYPEPESDPSTALFEVNSDLSASASASDCAWSLYDDLYLDTMYNDSE
APDVVDPQIGVTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKI
DLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT

Lsi03G010690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome