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Lsi03G010810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G010810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like
Genome locationchr03:20681517..20684034
RNA-Seq ExpressionLsi03G010810
SyntenyLsi03G010810
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044385.1 protein SENESCENCE-ASSOCIATED protein 21 [Cucumis melo var. makuwa]9.9e-1778.57Show/hide
Query:  RGYA-AVPEGVAARIGGMM-KKEESVR-STEK--VSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        RGYA A  EGVAARI  +M KKEES+R   EK  VSWVPDPVTGYYRPENC AE+DAADLRAMLLNPTTK
Subjt:  RGYA-AVPEGVAARIGGMM-KKEESVR-STEK--VSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

XP_008454329.1 PREDICTED: protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucumis melo]3.7e-1677.14Show/hide
Query:  RGYA-AVPEGVAARIGGMM-KKEESVR-STEK--VSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        RGYA A  EGVAARI  +M KKEES+R   EK  VSWVPDPVTGYYRPENC AE+DAADLRAMLLNP TK
Subjt:  RGYA-AVPEGVAARIGGMM-KKEESVR-STEK--VSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

XP_011652940.1 late embryogenesis abundant protein Lea5-A [Cucumis sativus]1.4e-1875.36Show/hide
Query:  RGYAAVPEGVAARIGGMM-KKEESV---RSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        RGYA  PEGVAAR+GG+M KKEES+   R  + VSWVPDPVTGYYRPENC AE+DAADLRAMLLN  TK
Subjt:  RGYAAVPEGVAARIGGMM-KKEESV---RSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

XP_022949199.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata]1.1e-1574.24Show/hide
Query:  RGY-AAVPEGVAARIGGMMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        RGY AA P+ VAARIG      ++V+STEK SWVPDPVTGYYRPENCAAEIDAADLRAMLL  T K
Subjt:  RGY-AAVPEGVAARIGGMMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

XP_023525742.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp. pepo]4.1e-1569.44Show/hide
Query:  RGYAAV-------PEGVAARIGGMMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        RGYAAV        +GVAARIG      ++V+STEK SWVPDPVTGYYRPENCAAEIDAADLRAMLL  T K
Subjt:  RGYAAV-------PEGVAARIGGMMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

TrEMBL top hitse value%identityAlignment
A0A0A0KTB8 Uncharacterized protein6.7e-1975.36Show/hide
Query:  RGYAAVPEGVAARIGGMM-KKEESV---RSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        RGYA  PEGVAAR+GG+M KKEES+   R  + VSWVPDPVTGYYRPENC AE+DAADLRAMLLN  TK
Subjt:  RGYAAVPEGVAARIGGMM-KKEESV---RSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

A0A1S3BZK3 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like1.8e-1677.14Show/hide
Query:  RGYA-AVPEGVAARIGGMM-KKEESVR-STEK--VSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        RGYA A  EGVAARI  +M KKEES+R   EK  VSWVPDPVTGYYRPENC AE+DAADLRAMLLNP TK
Subjt:  RGYA-AVPEGVAARIGGMM-KKEESVR-STEK--VSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

A0A5A7TSN1 Protein SENESCENCE-ASSOCIATED protein 214.8e-1778.57Show/hide
Query:  RGYA-AVPEGVAARIGGMM-KKEESVR-STEK--VSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        RGYA A  EGVAARI  +M KKEES+R   EK  VSWVPDPVTGYYRPENC AE+DAADLRAMLLNPTTK
Subjt:  RGYA-AVPEGVAARIGGMM-KKEESVR-STEK--VSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

A0A5D3E0D0 SENESCENCE-ASSOCIATED GENE 21 protein1.8e-1677.14Show/hide
Query:  RGYA-AVPEGVAARIGGMM-KKEESVR-STEK--VSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        RGYA A  EGVAARI  +M KKEES+R   EK  VSWVPDPVTGYYRPENC AE+DAADLRAMLLNP TK
Subjt:  RGYA-AVPEGVAARIGGMM-KKEESVR-STEK--VSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

A0A6J1GC45 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like5.3e-1674.24Show/hide
Query:  RGY-AAVPEGVAARIGGMMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        RGY AA P+ VAARIG      ++V+STEK SWVPDPVTGYYRPENCAAEIDAADLRAMLL  T K
Subjt:  RGY-AAVPEGVAARIGGMMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

SwissProt top hitse value%identityAlignment
P32292 Indole-3-acetic acid-induced protein ARG25.4e-1067.31Show/hide
Query:  ARIGGMM---KKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLL
        A IGG M     EE VR  EKVSWVPDPVTGYYRPEN   EID AD+RA +L
Subjt:  ARIGGMM---KKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLL

P46521 Late embryogenesis abundant protein Lea5-A1.4e-1050Show/hide
Query:  ALLAGAVWRGYAAVPEGVA----ARIGGMMK-------KEESVRSTEKVS--WVPDPVTGYYRPENCAAEIDAADLRAMLLN
        AL      RGY+  P         R G M K       KE S   T   S  W PDPVTGYYRPENC AEIDAADLR M+LN
Subjt:  ALLAGAVWRGYAAVPEGVA----ARIGGMMK-------KEESVRSTEKVS--WVPDPVTGYYRPENCAAEIDAADLRAMLLN

P46522 Late embryogenesis abundant protein Lea5-D1.9e-1052.7Show/hide
Query:  RGYAAVPEGVA----ARIGGMMK-------KEESVRSTEKVS--WVPDPVTGYYRPENCAAEIDAADLRAMLLN
        RGY+  P         R G M K       KE S   T   S  W PDPVTGYYRPENC AEIDAA+LR MLLN
Subjt:  RGYAAVPEGVA----ARIGGMMK-------KEESVRSTEKVS--WVPDPVTGYYRPENCAAEIDAADLRAMLLN

Q39644 Late embryogenesis abundant protein Lea59.3e-1056.06Show/hide
Query:  RGY-AAVPEGVAARIGGMMKKE--ESVRSTEKVS--WVPDPVTGYYRPENCAAEIDAADLRAMLLN
        RGY AA P G  +R G M K +   +VR     S  W PDP+TGYYRPEN A EID A+LR MLLN
Subjt:  RGY-AAVPEGVAARIGGMMKKE--ESVRSTEKVS--WVPDPVTGYYRPENCAAEIDAADLRAMLLN

Q93WF6 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial3.8e-1151.32Show/hide
Query:  LAGAVW-RGYAAVPEGVAARIGG--------MMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLN
        L+ A++ RGYAA     +   GG        +MKK+    ST+K+SWVPDP TGYYRPE  + EIDAA+LRA LLN
Subjt:  LAGAVW-RGYAAVPEGVAARIGG--------MMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLN

Arabidopsis top hitse value%identityAlignment
AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein1.5e-1048.15Show/hide
Query:  MQDRAGRALLAGAVW-RGYAAVPEGVAARIGGM----MKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLN
        +Q   G   L+ AV+ RG+AA  +   A  G +    MKK     S+EK  WVPDP TGYYRPE  + EID A+LRA+LLN
Subjt:  MQDRAGRALLAGAVW-RGYAAVPEGVAARIGGM----MKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLN

AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein3.4e-0739.68Show/hide
Query:  PEGVAARIGGMMKKEESVRST----EKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        PE  A  +   + K   V+      E++ W+PDP TGYYRP+N A E+DA +LR++  N   K
Subjt:  PEGVAARIGGMMKKEESVRST----EKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

AT4G02380.1 senescence-associated gene 212.7e-1251.32Show/hide
Query:  LAGAVW-RGYAAVPEGVAARIGG--------MMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLN
        L+ A++ RGYAA     +   GG        +MKK+    ST+K+SWVPDP TGYYRPE  + EIDAA+LRA LLN
Subjt:  LAGAVW-RGYAAVPEGVAARIGG--------MMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLN

AT4G02380.2 senescence-associated gene 212.7e-1253.62Show/hide
Query:  RGYAAVPEGVAARIGG--------MMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLN
        RGYAA     +   GG        +MKK+    ST+K+SWVPDP TGYYRPE  + EIDAA+LRA LLN
Subjt:  RGYAAVPEGVAARIGG--------MMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLN

AT4G15910.1 drought-induced 211.2e-0741.94Show/hide
Query:  AAVPEGVAARIGGMMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        A + +G + R+     ++  +    + +W PDPVTGYYRP N AAEID A+LR +LL    K
Subjt:  AAVPEGVAARIGGMMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACAGAGCTGGTCGCGCATTGCTGGCTGGAGCTGTATGGCGTGGATACGCGGCGGTGCCAGAAGGAGTTGCGGCCAGAATTGGCGGAATGATGAAGAAGGAAGA
ATCCGTAAGAAGTACAGAGAAGGTGTCGTGGGTTCCGGACCCCGTCACTGGTTATTACCGACCGGAGAACTGTGCCGCCGAGATCGACGCTGCCGATCTCCGGGCAATGC
TACTGAACCCAACAACAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACAGAGCTGGTCGCGCATTGCTGGCTGGAGCTGTATGGCGTGGATACGCGGCGGTGCCAGAAGGAGTTGCGGCCAGAATTGGCGGAATGATGAAGAAGGAAGA
ATCCGTAAGAAGTACAGAGAAGGTGTCGTGGGTTCCGGACCCCGTCACTGGTTATTACCGACCGGAGAACTGTGCCGCCGAGATCGACGCTGCCGATCTCCGGGCAATGC
TACTGAACCCAACAACAAAGTAATTAAATCACTTCATGAAATGTAAAGCTATTAGGAGCGATGTTCAACAGAGCTTTAACATCATCAGAAGATTTACGTATTTTTGGCCA
TGCCTGCTGGGGCTGTTAATAATTTATTATTATTATTTTTTTTAATTTTACACTTCAATAAAATTATATTTATAAAAGAAACAAAGAACTTAAAAATAAAATCACATATA
TATGAAAAA
Protein sequenceShow/hide protein sequence
MQDRAGRALLAGAVWRGYAAVPEGVAARIGGMMKKEESVRSTEKVSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK