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Lsi03G011200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G011200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNAC domain-containing protein
Genome locationchr03:21403720..21407423
RNA-Seq ExpressionLsi03G011200
SyntenyLsi03G011200
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN62332.1 hypothetical protein VITISV_000716 [Vitis vinifera]1.3e-0785.71Show/hide
Query:  RTDIKNWGERGSNSRPQDNSLSYETYALANCATTP
        R  IK WGERGSNSRPQD+S SYETYALANCATTP
Subjt:  RTDIKNWGERGSNSRPQDNSLSYETYALANCATTP
OMO60286.1 hypothetical protein COLO4_33878 [Corchorus olitorius]1.7e-0780Show/hide
Query:  FKLLKRTDIKNWGERGSNSRPQDNSLSYETYALANCATTP
        FK +KR   K WGERGSNSRPQD+S SYETYALANCATTP
Subjt:  FKLLKRTDIKNWGERGSNSRPQDNSLSYETYALANCATTP
TrEMBL top hitse value%identityAlignment
A0A1R3GQG3 Uncharacterized protein8.4e-0880Show/hide
Query:  FKLLKRTDIKNWGERGSNSRPQDNSLSYETYALANCATTP
        FK +KR   K WGERGSNSRPQD+S SYETYALANCATTP
Subjt:  FKLLKRTDIKNWGERGSNSRPQDNSLSYETYALANCATTP
A5ADA6 NAC domain-containing protein6.4e-0885.71Show/hide
Query:  RTDIKNWGERGSNSRPQDNSLSYETYALANCATTP
        R  IK WGERGSNSRPQD+S SYETYALANCATTP
Subjt:  RTDIKNWGERGSNSRPQDNSLSYETYALANCATTP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTCCCCTTCCATGAAACGTTCTTTTATAGTCAACGTCCTGCTTTCAAACTTTTAAAACGGACCGATATTAAAAATTGGGGTGAGAGAGGCTCGAACTCTCGACC
TCAGGATAACTCTTTAAGCTATGAGACCTACGCGCTAGCCAACTGCGCCACCACCCCTTGT
mRNA sequenceShow/hide mRNA sequence
ATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTCTCCCCTTCCATGAAACGTTCTTTTATAGTCAACGTCCTGCTTTCAAACTTTTAAAACGGACCGAT
ATTAAAAATTGGGGTGAGAGAGGCTCGAACTCTCGACCTCAGGATAACTCTTTAAGCTATGAGACCTACGCGCTAGCCAACTGCGCCACCACCCCTTGT
Protein sequenceShow/hide protein sequence
MLLPFHETFFYSQRPAFKLLKRTDIKNWGERGSNSRPQDNSLSYETYALANCATTPC