; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G011690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G011690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr03:22062823..22064792
RNA-Seq ExpressionLsi03G011690
SyntenyLsi03G011690
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR018215 - ClpP, Ser active site
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148570.1 ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucumis sativus]2.3e-12595.87Show/hide
Query:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
        MIWR LASTSMLLA+KSTASA GRTA RDFRR YSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENP+KPI+MYLNSP
Subjt:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQ V+IIQK
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDK
        YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVGNEGKDK
Subjt:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDK

XP_008461846.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Cucumis melo]8.5e-12897.52Show/hide
Query:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
        MIWR LASTSMLLA+KSTASA+GRTA RDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
Subjt:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQ VDIIQK
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDK
        YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVGNEGKDK
Subjt:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDK

XP_022153186.1 ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Momordica charantia]1.8e-12595.1Show/hide
Query:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
        MIWR LASTSMLLA KST+ ANG TA RDFRRAYSL+PMVIEHTSRGERAYDIFSRLLKERIICINGPISDDT+HVVVAQLLFLESENPSKPINMYLNSP
Subjt:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQ VDIIQK
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS
        YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVG+EGKDKGS+
Subjt:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS

XP_022998489.1 ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like [Cucurbita maxima]3.0e-12593.47Show/hide
Query:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
        MIWR LASTS +L +KST  ANGRTA RDFRRAYSL+PMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
Subjt:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKD+TIHTKQIVRVWDALNELYSKHTSQPVD I++
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS
        YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVG +GKDKGS+
Subjt:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS

XP_038903213.1 ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Benincasa hispida]4.1e-13097.96Show/hide
Query:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
        MIWR LASTSMLLA+KSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
Subjt:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQ V+IIQK
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS
        YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVGNEGKDKGSS
Subjt:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS

TrEMBL top hitse value%identityAlignment
A0A0A0LC78 ATP-dependent Clp protease proteolytic subunit1.1e-12595.87Show/hide
Query:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
        MIWR LASTSMLLA+KSTASA GRTA RDFRR YSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENP+KPI+MYLNSP
Subjt:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQ V+IIQK
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDK
        YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVGNEGKDK
Subjt:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDK

A0A1S3CFJ3 ATP-dependent Clp protease proteolytic subunit4.1e-12897.52Show/hide
Query:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
        MIWR LASTSMLLA+KSTASA+GRTA RDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
Subjt:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQ VDIIQK
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDK
        YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVGNEGKDK
Subjt:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDK

A0A5D3BXE8 ATP-dependent Clp protease proteolytic subunit4.1e-12897.52Show/hide
Query:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
        MIWR LASTSMLLA+KSTASA+GRTA RDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
Subjt:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQ VDIIQK
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDK
        YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVGNEGKDK
Subjt:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDK

A0A6J1DJW7 ATP-dependent Clp protease proteolytic subunit8.6e-12695.1Show/hide
Query:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
        MIWR LASTSMLLA KST+ ANG TA RDFRRAYSL+PMVIEHTSRGERAYDIFSRLLKERIICINGPISDDT+HVVVAQLLFLESENPSKPINMYLNSP
Subjt:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQ VDIIQK
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS
        YMDRDYFMTPEEAKEFGIIDEV+DQRPIALVTDAVG+EGKDKGS+
Subjt:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS

A0A6J1KEG6 ATP-dependent Clp protease proteolytic subunit1.5e-12593.47Show/hide
Query:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
        MIWR LASTS +L +KST  ANGRTA RDFRRAYSL+PMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP
Subjt:  MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKD+TIHTKQIVRVWDALNELYSKHTSQPVD I++
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS
        YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVG +GKDKGS+
Subjt:  YMDRDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS

SwissProt top hitse value%identityAlignment
A1USA7 ATP-dependent Clp protease proteolytic subunit5.8e-7165.82Show/hide
Query:  RRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA
        + A SLVPMV+E T+RGERAYDIFSRLLKERII INGP+ D  A +V AQLLFLE+ENP K I++Y+NSPGG VT+G+AIYDTMQ+IR PI+T+C+GQAA
Subjt:  RRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA

Query:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMDQR
        SM SLLL AGAKG R SLPNA IM+HQPSGG+ GQA D+  H + I+R+   LNE+Y +HT Q  +II+  +DRD+FMT EEAK FG+ID+V+  R
Subjt:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMDQR

A5D447 ATP-dependent Clp protease proteolytic subunit1.7e-7065.62Show/hide
Query:  SLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMAS
        +LVP+V+E T+RGERAYDI+SRLLK+RII + GPI D+TA++++AQ+LFLE+E+P K I  Y+NSPGG VTAG+AIYDTMQY+RSP+ TIC+GQAASMAS
Subjt:  SLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMAS

Query:  LLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMDQR
        LLLAAGAKG+R SLP A I+IHQP GG  GQA D+ IH K+I+R+   LNE+ S+HT QP++ I +  +RDYFM+ +EAKE+GIIDEV D R
Subjt:  LLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMDQR

Q6G178 ATP-dependent Clp protease proteolytic subunit7.6e-7163.78Show/hide
Query:  RRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA
        + A SLVPMVIE T+RGERAYDIFSRLLKERII INGP+ D  A +V AQLLFLE+ENP K I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAA
Subjt:  RRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA

Query:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMDQR
        SM SLLL AGAKG R +LPNA IM+HQPSGG+ GQA D+  H + I+++   LNE+Y +HT Q  ++I++ +DRD+FMT EEAK+FG++D+V+  R
Subjt:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMDQR

Q6G3Z3 ATP-dependent Clp protease proteolytic subunit2.6e-7164.29Show/hide
Query:  RRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA
        + A SLVPMVIE T+RGERAYDIFSRLLKERII INGP+ D  A +V AQLLFLE+ENP K I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAA
Subjt:  RRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA

Query:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMDQR
        SM SLLL AGAKG R +LPNA IM+HQPSGG+ GQA D+  H + I+++   LNE+Y +HT Q  D+I++ +DRD+FMT EEAK+FG++D+V+  R
Subjt:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMDQR

Q9FN42 ATP-dependent Clp protease proteolytic subunit 2, mitochondrial5.0e-10780.17Show/hide
Query:  RGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGA
        RGL S + +L+S  ++ A   T+    RR+YSL+PMVIEH+SRGERAYDIFSRLLKERIICINGPI+DDT+HVVVAQLL+LESENPSKPI+MYLNSPGG 
Subjt:  RGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGA

Query:  VTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMD
        VTAGLAIYDTMQYIRSPI+TICLGQAASMASLLLAAGAKG+RRSLPNAT+MIHQPSGGYSGQAKD+TIHTKQIVRVWDALNELY KHT QP+D++   MD
Subjt:  VTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMD

Query:  RDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS
        RD+FMTPEEAK FGIIDEV+D+RP+ LV DAVGNE KDK SS
Subjt:  RDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 57.4e-4549.43Show/hide
Query:  ERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRS
        ER   I S+L + RII   G + DD A+++VAQLL+L++ +P+K I MY+NSPGG+VTAG+AI+DTM++IR  ++T+C+G AASM + LL+AG KG+R S
Subjt:  ERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRS

Query:  LPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVM
        LPN+ IMIHQP GG  G   D+ I   +++     LN   + HT Q ++ I +  DRD+FM+ +EAKE+G+ID V+
Subjt:  LPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVM

AT1G11750.1 CLP protease proteolytic subunit 61.3e-3339.88Show/hide
Query:  DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA
        D+ S L + RII I  PI+   A  V++QL+ L S +    I MYLN PGG+  + LAIYD M +I+  + T+  G AAS  +LLLA G KG R ++PN 
Subjt:  DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA

Query:  TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMD
         +MIHQP  G  G  +D+     + +     ++ +Y+  T QP++ +Q+Y +RD F++  EA EFG+ID +++
Subjt:  TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMD

AT1G66670.1 CLP protease proteolytic subunit 31.4e-4041.67Show/hide
Query:  DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA
        D  + LL++RI+ +   + D TA +V++QLL L++E+  + I +++NSPGG++TAG+ IYD M+  ++ ++T+CLG AASM + LLA+G+KG+R  +PN+
Subjt:  DIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA

Query:  TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMDQRPIALV
         +MIHQP G   G+A +M+I  ++++     LN+++S+ T +P   I+   DRD F+ P EAKE+G+ID V+D     L+
Subjt:  TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMDQRPIALV

AT5G23140.1 nuclear-encoded CLP protease P73.6e-10880.17Show/hide
Query:  RGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGA
        RGL S + +L+S  ++ A   T+    RR+YSL+PMVIEH+SRGERAYDIFSRLLKERIICINGPI+DDT+HVVVAQLL+LESENPSKPI+MYLNSPGG 
Subjt:  RGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGA

Query:  VTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMD
        VTAGLAIYDTMQYIRSPI+TICLGQAASMASLLLAAGAKG+RRSLPNAT+MIHQPSGGYSGQAKD+TIHTKQIVRVWDALNELY KHT QP+D++   MD
Subjt:  VTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMD

Query:  RDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS
        RD+FMTPEEAK FGIIDEV+D+RP+ LV DAVGNE KDK SS
Subjt:  RDYFMTPEEAKEFGIIDEVMDQRPIALVTDAVGNEGKDKGSS

AT5G45390.1 CLP protease P42.1e-3943.17Show/hide
Query:  EHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGA
        E   RG  + D+   LL+ERI+ +   I D  A  +++QLL L++++P K I +++NSPGG+++A +AIYD +Q +R+ ++TI LG AAS AS++L AG 
Subjt:  EHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGA

Query:  KGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMD
        KG+R ++PN  IMIHQP GG SGQA D+ I  K+++   + +  + +  TS+  + + K +DRD +M+P EA E+G+ID V+D
Subjt:  KGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIIDEVMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTGGAGGGGTTTAGCTTCCACCTCAATGCTGCTCGCTTCTAAATCCACAGCTTCGGCGAACGGAAGAACGGCGACGAGGGATTTTCGTCGCGCGTACAGTTTGGT
TCCGATGGTCATTGAACACACATCGAGAGGAGAAAGAGCCTACGATATCTTCTCTCGTCTTCTCAAGGAGCGCATAATTTGCATCAATGGCCCCATTTCTGACGATACTG
CCCACGTCGTGGTTGCTCAGCTCCTCTTTCTCGAGTCTGAGAACCCCTCGAAGCCCATCAACATGTACCTCAACTCCCCCGGCGGCGCTGTCACTGCCGGGCTTGCTATA
TATGATACTATGCAGTATATAAGATCACCCATCAACACCATCTGTCTGGGTCAGGCTGCCTCGATGGCTTCTCTTCTTCTTGCTGCTGGTGCCAAGGGTGAGAGACGATC
GCTTCCTAATGCAACTATCATGATTCACCAGCCTTCTGGTGGATACAGTGGGCAAGCAAAGGATATGACAATTCACACAAAACAGATTGTTCGGGTTTGGGATGCACTAA
ATGAGCTGTATTCCAAGCATACGTCACAGCCAGTAGACATTATTCAGAAGTATATGGACAGGGATTATTTTATGACCCCAGAAGAGGCCAAGGAGTTTGGCATAATCGAC
GAGGTGATGGATCAAAGGCCCATAGCCCTGGTGACCGATGCAGTTGGTAATGAAGGCAAAGATAAAGGTTCGAGCTAA
mRNA sequenceShow/hide mRNA sequence
AAGCAATATTTCGGCCCACAAATTCACAGGAAAAAGAAAACTAAATTTCACTTTGCTTTCAGAGAGAAAGAGAGAGCGGGAGAGAGAGAAGTAGGAACTCGAGCGGGAGA
GAGAGAAGTAGGAACTCTAAATCTGGAGGTTGAAGTTGAAGCTGATAAACCCTCGATTACAATCCCAATAAATCGAACCAGTTCACCATGATCTGGAGGGGTTTAGCTTC
CACCTCAATGCTGCTCGCTTCTAAATCCACAGCTTCGGCGAACGGAAGAACGGCGACGAGGGATTTTCGTCGCGCGTACAGTTTGGTTCCGATGGTCATTGAACACACAT
CGAGAGGAGAAAGAGCCTACGATATCTTCTCTCGTCTTCTCAAGGAGCGCATAATTTGCATCAATGGCCCCATTTCTGACGATACTGCCCACGTCGTGGTTGCTCAGCTC
CTCTTTCTCGAGTCTGAGAACCCCTCGAAGCCCATCAACATGTACCTCAACTCCCCCGGCGGCGCTGTCACTGCCGGGCTTGCTATATATGATACTATGCAGTATATAAG
ATCACCCATCAACACCATCTGTCTGGGTCAGGCTGCCTCGATGGCTTCTCTTCTTCTTGCTGCTGGTGCCAAGGGTGAGAGACGATCGCTTCCTAATGCAACTATCATGA
TTCACCAGCCTTCTGGTGGATACAGTGGGCAAGCAAAGGATATGACAATTCACACAAAACAGATTGTTCGGGTTTGGGATGCACTAAATGAGCTGTATTCCAAGCATACG
TCACAGCCAGTAGACATTATTCAGAAGTATATGGACAGGGATTATTTTATGACCCCAGAAGAGGCCAAGGAGTTTGGCATAATCGACGAGGTGATGGATCAAAGGCCCAT
AGCCCTGGTGACCGATGCAGTTGGTAATGAAGGCAAAGATAAAGGTTCGAGCTAAGAATTTGAGGTAGGATCTTGACGTGAAAGCATGGCATTTCAAGTTGCATACTGAC
TTTTGATAGATTTATCCAAAAGTTACTTATCTTCCTAGATGTGATGGAAATAATTATTTTTTCTTGGCTAAATGTCCCTTTGGCTGTTTGGATCAGTAATGTTATTTTGT
GTATTCGACATTGATATAATAGATGTTTTTATTTATCCATGTCATATTTGATTCTTCTAGTTCACCTCAATAGAGAATCGTGTGGCAAGTGGATCACGATTTATACTTCT
GCGAAGTTATACAGGTAGGGTCCAATATATGACACGGGAAATGGAACTCTGTAAACTTTACGTCGTGTCATATGCTACATAATTTATCGAAAAACAGTAGATGGTTCTTG
TAAGATTCTTACAACAGTATGACTCAATTTTATAGACCATATCAGATTTGGCAGAATTTGTACTTCAGTCC
Protein sequenceShow/hide protein sequence
MIWRGLASTSMLLASKSTASANGRTATRDFRRAYSLVPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAI
YDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQPVDIIQKYMDRDYFMTPEEAKEFGIID
EVMDQRPIALVTDAVGNEGKDKGSS