; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G012260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G012260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L6
Genome locationchr03:22837894..22840770
RNA-Seq ExpressionLsi03G012260
SyntenyLsi03G012260
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000915 - 60S ribosomal protein L6E
IPR005568 - Ribosomal protein L6, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041997 - Ribosomal Protein L6, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149609.1 60S ribosomal protein L6-2 [Cucumis sativus]3.7e-11897.4Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEKPPKFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVD AL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL

Query:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF
        LKSIEAVSDL+TYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF

XP_008461779.1 PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo]1.4e-11796.97Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPPKFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQK VD AL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL

Query:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF
        LKSIEAVSDL+TYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF

XP_022935449.1 60S ribosomal protein L6-1-like [Cucurbita moschata]2.2e-11897.4Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVD AL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL

Query:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF
        LKSIEAVSDL+TYLAARFSLK+GMKPHELVF
Subjt:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF

XP_023528566.1 60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo]2.4e-11796.54Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPK AR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVD AL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL

Query:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF
        LKSIEAVSDL+TYLAARFSLK+GMKPHELVF
Subjt:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF

XP_038880885.1 60S ribosomal protein L6-1-like [Benincasa hispida]4.8e-11897.84Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRK KPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL
        KGKRVVFLKQL SGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVD AL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL

Query:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF
        LKSIEAV+DL+TYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF

TrEMBL top hitse value%identityAlignment
A0A0A0KYA4 60S ribosomal protein L69.1e-12393.98Show/hide
Query:  FQQAGEGRRRCQILRNSSMAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTK
        F +  E RRRCQILR+SSMAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD+PAEKPPKFYPADDVKKPLVNKRK KPTK
Subjt:  FQQAGEGRRRCQILRNSSMAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTK

Query:  LRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEK
        LRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKEEK
Subjt:  LRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEK

Query:  SALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF
        SALPQ+KKDDQKAVD ALLKSIEAVSDL+TYLAARFSLKAGMKPHELVF
Subjt:  SALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF

A0A0A0L9J7 60S ribosomal protein L61.8e-11897.4Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEKPPKFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVD AL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL

Query:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF
        LKSIEAVSDL+TYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF

A0A1S3CFY6 60S ribosomal protein L66.8e-11896.97Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPPKFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQK VD AL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL

Query:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF
        LKSIEAVSDL+TYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF

A0A5D3CKB9 60S ribosomal protein L66.8e-11896.97Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPPKFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQK VD AL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL

Query:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF
        LKSIEAVSDL+TYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF

A0A6J1F5G0 60S ribosomal protein L61.0e-11897.4Show/hide
Query:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVD AL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLAL

Query:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF
        LKSIEAVSDL+TYLAARFSLK+GMKPHELVF
Subjt:  LKSIEAVSDLRTYLAARFSLKAGMKPHELVF

SwissProt top hitse value%identityAlignment
P34091 60S ribosomal protein L61.6e-10083.04Show/hide
Query:  VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVF
        VSRNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADDVKKPL+NKRK KPTKLR+SITPGTVLIIL GRFKGKRVVF
Subjt:  VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVF

Query:  LKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKSIEAV
        LKQL SGLLLVTGPFKVNGVPLRRVNQ+YVIATSTKVDI+GVNVEKFDDKYF K+ +KK KKGEGEFFEAEK+E + LPQ+KKDDQKAVD+ALLK+IE V
Subjt:  LKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKSIEAV

Query:  SDLRTYLAARFSLKAGMKPHELVF
         +L+ YL ARFSLKAGMKPHELVF
Subjt:  SDLRTYLAARFSLKAGMKPHELVF

P47911 60S ribosomal protein L67.1e-4848.64Show/hide
Query:  PKTAR--VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD--------------------APAEKPPKFYPADDVKKPLVNKRKAKP
        PK A+   SRNP L+RG+G+YSRS MY ++ L+  K K      + + K K +                        K P++YP +DV + L++  K KP
Subjt:  PKTAR--VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD--------------------APAEKPPKFYPADDVKKPLVNKRKAKP

Query:  -----TKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEK-FDDKYFSKEVQKKKKKGEGEF
              +LRSSITPGTVLIILTGR +GKRVVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTKVDI+ V + K   D YF K+  +K +  EGE 
Subjt:  -----TKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEK-FDDKYFSKEVQKKKKKGEGEF

Query:  FEAEKEEKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF
        F+ EK EK  + + +K DQKAVDL +L  I+AV  L+ YL ++FSL  GM PH+LVF
Subjt:  FEAEKEEKSALPQDKKDDQKAVDLALLKSIEAVSDLRTYLAARFSLKAGMKPHELVF

Q9C9C5 60S ribosomal protein L6-32.9e-10282.89Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK
        +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFYPA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKS

Query:  IEAVSDLRTYLAARFSLKAGMKPHELVF
        IEAV +L+TYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLRTYLAARFSLKAGMKPHELVF

Q9C9C6 60S ribosomal protein L6-21.7e-10282.89Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK
        +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFYPA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKS

Query:  IEAVSDLRTYLAARFSLKAGMKPHELVF
        IEAV +L+TYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLRTYLAARFSLKAGMKPHELVF

Q9FZ76 60S ribosomal protein L6-12.3e-10281.3Show/hide
Query:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFK
        A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP KFYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFK
Subjt:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALL
        GKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ+KK+DQK VD AL+
Subjt:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALL

Query:  KSIEAVSDLRTYLAARFSLKAGMKPHELVF
        KSIEAV +L+ YL ARFSL  GMKPHELVF
Subjt:  KSIEAVSDLRTYLAARFSLKAGMKPHELVF

Arabidopsis top hitse value%identityAlignment
AT1G18540.1 Ribosomal protein L6 family protein1.6e-10381.3Show/hide
Query:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFK
        A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP KFYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFK
Subjt:  APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALL
        GKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ+KK+DQK VD AL+
Subjt:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALL

Query:  KSIEAVSDLRTYLAARFSLKAGMKPHELVF
        KSIEAV +L+ YL ARFSL  GMKPHELVF
Subjt:  KSIEAVSDLRTYLAARFSLKAGMKPHELVF

AT1G74050.1 Ribosomal protein L6 family protein2.1e-10382.89Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK
        +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFYPA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKS

Query:  IEAVSDLRTYLAARFSLKAGMKPHELVF
        IEAV +L+TYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLRTYLAARFSLKAGMKPHELVF

AT1G74060.1 Ribosomal protein L6 family protein1.2e-10382.89Show/hide
Query:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK
        +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFYPA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLALLKS

Query:  IEAVSDLRTYLAARFSLKAGMKPHELVF
        IEAV +L+TYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLRTYLAARFSLKAGMKPHELVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTAGAAGTGTTTCAGCAAGCAGGGGAGGGGAGGCGACGCTGCCAAATTCTCAGAAATTCATCAATGGCTCCGAAGACAGCTAGAGTTAGCCGAAACCCCGATCTCATTCG
AGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCACAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTTCCTCGCCACGATGCCAAGCCTAAGGCCG
ACGCACCAGCAGAGAAGCCGCCGAAATTTTACCCTGCTGACGATGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTCTAGCATTACTCCT
GGAACCGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTGACCGGTCCATTCAAGGTCAATGG
TGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCTACCAAGGTGGACATTGCCGGAGTCAATGTGGAGAAGTTTGACGACAAATATTTCTCCAAGGAAG
TTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTTCCACAAGACAAAAAAGATGATCAGAAGGCCGTGGACTTGGCG
CTTCTAAAGTCCATTGAGGCAGTTTCAGACTTAAGAACCTACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCACGAGCTTGTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
CTAGAAGTGTTTCAGCAAGCAGGGGAGGGGAGGCGACGCTGCCAAATTCTCAGAAATTCATCAATGGCTCCGAAGACAGCTAGAGTTAGCCGAAACCCCGATCTCATTCG
AGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCACAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTTCCTCGCCACGATGCCAAGCCTAAGGCCG
ACGCACCAGCAGAGAAGCCGCCGAAATTTTACCCTGCTGACGATGTCAAGAAACCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTCTAGCATTACTCCT
GGAACCGTGCTTATCATTCTTACTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTGACCGGTCCATTCAAGGTCAATGG
TGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCTACCAAGGTGGACATTGCCGGAGTCAATGTGGAGAAGTTTGACGACAAATATTTCTCCAAGGAAG
TTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTTCCACAAGACAAAAAAGATGATCAGAAGGCCGTGGACTTGGCG
CTTCTAAAGTCCATTGAGGCAGTTTCAGACTTAAGAACCTACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCACGAGCTTGTTTTCTAGATATTTTTCTC
TTTGGTGCTGTGATACTTTTCTTGTGGAATTTGATCCCTACAATCTTCTTGTTCATGTTTTTAATGAGGATTCTAGATTTGAAATTATGTCTCGCAATGAATTTTGCAGT
GAAGTTTTATTCATCAAATCTTACGTTTTGTAGCTTCCTTTGACTACTGATAGTGATAAGATATGTACTTTTTCTTCAATTGTATCATTGTCTTCTAGCTGATGAAATAC
TTAGAGAATCATTTGAAAAGAAGCCATGATGCATAGCCATATTTGATTAGTCTGCAACGAGTTGCTATTAGGGCAATATATGCTTGAGTCTCTAATATTTGTGGTTTCTT
TTTCAATATGGTTAATTAATGATCGTTTTAAAGTC
Protein sequenceShow/hide protein sequence
LEVFQQAGEGRRRCQILRNSSMAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITP
GTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDLA
LLKSIEAVSDLRTYLAARFSLKAGMKPHELVF