CuGenDBv2

Gene ID	Lsi03G012500
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr03:23104092..23104379
RNA-Seq Expression	Lsi03G012500
Synteny	Lsi03G012500
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011651806.1 uncharacterized protein LOC101216392 [Cucumis sativus]

8.1e-42

96.84

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGAT SSCSGLTG QRELC LEHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL

XP_016902957.1 PREDICTED: uncharacterized protein LOC103501213 [Cucumis melo]

3.1e-41

95.79

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGAT SSCSGLTG QRELC LEHAKASLA GKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL

XP_022153454.1 uncharacterized protein LOC111020959 [Momordica charantia]

1.5e-40

93.68

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWS LF RHRFLLTALALLTFLCTIYLYFAITLGAT SSCSGLTGAQ+ELC +EHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL

XP_022948745.1 uncharacterized protein LOC111452323 [Cucurbita moschata]

9.8e-40

92.63

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL
        MVLDSILASP RR+P+FRKQFPANELGSWSTLF RHRFLLTALALLT LCTIYLYFAITLGAT SSCSGLTGAQ+ELCHLEHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL

XP_038903507.1 uncharacterized protein LOC120090090 [Benincasa hispida]

8.9e-41

94.68

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKF
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFA+TLGAT SSCSGLTG QRELC LEHAKASL KGKLKF
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9L6 Uncharacterized protein

3.9e-42

96.84

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGAT SSCSGLTG QRELC LEHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL

A0A1S4E410 uncharacterized protein LOC103501213

1.5e-41

95.79

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGAT SSCSGLTG QRELC LEHAKASLA GKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL

A0A5D3DCR7 Uncharacterized protein

1.5e-41

95.79

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGAT SSCSGLTG QRELC LEHAKASLA GKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL

A0A6J1DJ35 uncharacterized protein LOC111020959

7.4e-41

93.68

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWS LF RHRFLLTALALLTFLCTIYLYFAITLGAT SSCSGLTGAQ+ELC +EHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL

A0A6J1GA22 uncharacterized protein LOC111452323

4.8e-40

92.63

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL
        MVLDSILASP RR+P+FRKQFPANELGSWSTLF RHRFLLTALALLT LCTIYLYFAITLGAT SSCSGLTGAQ+ELCHLEHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G16170.1 unknown protein

9.5e-25

61.7

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKF
        MVLD +++SP RR    +KQ+  +ELGSWSTL +RH++LLTALALL FLCT+YLYFA+TLGA  SSC GLTG  + +C L+  +A L+KGKLKF
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKF

AT1G79660.1 unknown protein

1.8e-23

57.45

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKF
        MVLD I++SP RR  + +KQ+  ++LGS ST+ +RHRFLLTA+ LL FLCTIY+YFA+TLGA    CSG+TG  + +C +EH +AS + GKLKF
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKF

Sequences

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CDS sequence

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ATGGTTCTTGACAGCATTCTAGCTTCTCCCCATAGGAGGTCCCCATCATTCAGAAAGCAGTTTCCTGCAAATGAGTTGGGCAGTTGGTCCACTCTCTTCAAGCGGCATCG
CTTCCTCTTAACAGCGCTGGCACTCTTGACTTTCCTTTGCACAATCTATCTTTACTTTGCTATCACTTTAGGGGCTACCGTGTCGTCTTGTTCGGGTTTGACTGGAGCTC
AAAGAGAATTGTGTCATCTGGAGCATGCTAAAGCTTCTCTGGCTAAAGGCAAATTAAAGTTTCTATGA

mRNA sequence

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Protein sequence

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MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITLGATVSSCSGLTGAQRELCHLEHAKASLAKGKLKFL

Lsi03G012500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome