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Lsi03G012570 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G012570
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionABC transporter C family member 13 isoform X4
Genome locationchr03:23181145..23186764
RNA-Seq ExpressionLsi03G012570
SyntenyLsi03G012570
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465142.1 PREDICTED: ABC transporter C family member 13 isoform X5 [Cucumis melo]1.7e-0484.85Show/hide
Query:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
        I RT+NNSFVVLLD+MF TSAFIISSEHAKS S
Subjt:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
XP_016903341.1 PREDICTED: ABC transporter C family member 13 isoform X2 [Cucumis melo]1.7e-0484.85Show/hide
Query:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
        I RT+NNSFVVLLD+MF TSAFIISSEHAKS S
Subjt:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
XP_038903953.1 ABC transporter C family member 13 isoform X1 [Benincasa hispida]1.1e-0693.94Show/hide
Query:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
        ILRTLNNSFVVLLDVMFGTSAF+ISSEHAK+RS
Subjt:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
XP_038903954.1 ABC transporter C family member 13 isoform X2 [Benincasa hispida]1.1e-0693.94Show/hide
Query:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
        ILRTLNNSFVVLLDVMFGTSAF+ISSEHAK+RS
Subjt:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
XP_038903956.1 ABC transporter C family member 13 isoform X3 [Benincasa hispida]1.1e-0693.94Show/hide
Query:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
        ILRTLNNSFVVLLDVMFGTSAF+ISSEHAK+RS
Subjt:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
TrEMBL top hitse value%identityAlignment
A0A1S3CN39 ABC transporter C family member 13 isoform X58.4e-0584.85Show/hide
Query:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
        I RT+NNSFVVLLD+MF TSAFIISSEHAKS S
Subjt:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
A0A1S3CN66 ABC transporter C family member 13 isoform X18.4e-0584.85Show/hide
Query:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
        I RT+NNSFVVLLD+MF TSAFIISSEHAKS S
Subjt:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
A0A1S3CN77 ABC transporter C family member 13 isoform X48.4e-0584.85Show/hide
Query:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
        I RT+NNSFVVLLD+MF TSAFIISSEHAKS S
Subjt:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
A0A1S3CPP3 ABC transporter C family member 13 isoform X38.4e-0584.85Show/hide
Query:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
        I RT+NNSFVVLLD+MF TSAFIISSEHAKS S
Subjt:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
A0A1S4E532 ABC transporter C family member 13 isoform X28.4e-0584.85Show/hide
Query:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
        I RT+NNSFVVLLD+MF TSAFIISSEHAKS S
Subjt:  ILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAGCGGCCACATCTCGATTCCTTCGCTTGCTTTCCTCGTTGTTATGGTGAAAATACTCTGCAAAAATTGAACTCAGCTGCGACGACGACGACAATGGCGGATTG
GTTTTTGTGCCATGTTTGCCCCGATTCTCCCTATATACTCAGAACACTGAACAACAGTTTTGTTGTCTTGTTGGATGTTATGTTTGGCACATCAGCATTCATTATCAGTT
CAGAGCATGCAAAAAGCAGGTCATGTCTTAAGGCAGTGGTTGACAACCTCAGATTGCTCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAGCGGCCACATCTCGATTCCTTCGCTTGCTTTCCTCGTTGTTATGGTGAAAATACTCTGCAAAAATTGAACTCAGCTGCGACGACGACGACAATGGCGGATTG
GTTTTTGTGCCATGTTTGCCCCGATTCTCCCTATATACTCAGAACACTGAACAACAGTTTTGTTGTCTTGTTGGATGTTATGTTTGGCACATCAGCATTCATTATCAGTT
CAGAGCATGCAAAAAGCAGGTCATGTCTTAAGGCAGTGGTTGACAACCTCAGATTGCTCATCTGA
Protein sequenceShow/hide protein sequence
MNERPHLDSFACFPRCYGENTLQKLNSAATTTTMADWFLCHVCPDSPYILRTLNNSFVVLLDVMFGTSAFIISSEHAKSRSCLKAVVDNLRLLI