; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G012790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G012790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Genome locationchr03:23617463..23622973
RNA-Seq ExpressionLsi03G012790
SyntenyLsi03G012790
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR016464 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141152.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus]5.7e-3556.36Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_008465169.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo]2.0e-3556.97Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_022152373.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia]4.8e-3455.15Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSGVEPQLWARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_022935669.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata]9.7e-3556.36Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSGVEPQLWARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_038906356.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]5.7e-3556.36Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRGQLSKNLKELRILLCQSSPSSAPAR FVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS

TrEMBL top hitse value%identityAlignment
A0A0A0LDA2 L51_S25_CI-B8 domain-containing protein2.8e-3556.36Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A1S3CN67 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 29.5e-3656.97Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A5A7T2I6 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 29.5e-3656.97Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1F628 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like4.7e-3556.36Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSGVEPQLWARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1J6D3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like2.3e-3455.76Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSGVEPQLWARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MGIERVARLEGLSEAQI KALEDLVKVGAS
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS

SwissProt top hitse value%identityAlignment
O43678 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.3e-1348.15Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKK
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY     T+       V LNN     + +
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKK

P0CB79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 23.7e-1362.96Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARY
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARY

Q02370 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.7e-1346.59Show/hide
Query:  RGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKK
        RG+L   L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY      +       V+LNN     + +
Subjt:  RGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKK

Q4R5E2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 23.7e-1362.96Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARY
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARY

Q9FIJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.8e-2844.24Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSGV+PQ+WARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MG+ER   L+GL+E QI KALE+LVK GA+
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS

Arabidopsis top hitse value%identityAlignment
AT5G47890.1 NADH-ubiquinone oxidoreductase B8 subunit, putative1.3e-2944.24Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR
        MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSGV+PQ+WARYD                                   
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSR

Query:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS
                                           MG+ER   L+GL+E QI KALE+LVK GA+
Subjt:  SSRNPDNAPRLLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAATCCTCTCCTTCAAGCGCCCCCGCTAGGGCATTTGTGGAAAAGAATTACAA
GGATCTCAAGACTTTGAATCCCAAATTTCCAATTTTGATCCGCGAATGCAGTGGAGTCGAGCCGCAATTATGGGCTAGATATGATTCAAGTTCTTCAACCGACACTTGTG
TAGACTATAGTGTAGTTACACTCAACAATATTAGAGTCTCTTCAATCAAGAAGAACTGCCTCTGTTACAAACCCAGCAGATCCTCTAGGAATCCTGACAACGCTCCCCGA
TTGCTAAAGTATACTTACAGTCGACCAAAAAAGGAATCAAATCCTCCTACACTTGATGACACAGAGCATCATTACATGGGCATTGAGAGGGTTGCTCGTCTGGAGGGCTT
GAGTGAGGCACAGATCTCGAAGGCGCTCGAAGACCTAGTTAAAGTTGGGGCATCCTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAGAAAAAAAATAAAAATAAAAAAAATTCCCTTGTTACTTAGCACTGGCGAAGGCCGATTGGCATTTGGGAAGGTCCGGGTTCGTTCATCTGAGGTACAGAGACTTC
ACTTCATTCACGAACAGCGAGAGAGGTTGAAATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAATCCTCTCCTTCAAGCGCCC
CCGCTAGGGCATTTGTGGAAAAGAATTACAAGGATCTCAAGACTTTGAATCCCAAATTTCCAATTTTGATCCGCGAATGCAGTGGAGTCGAGCCGCAATTATGGGCTAGA
TATGATTCAAGTTCTTCAACCGACACTTGTGTAGACTATAGTGTAGTTACACTCAACAATATTAGAGTCTCTTCAATCAAGAAGAACTGCCTCTGTTACAAACCCAGCAG
ATCCTCTAGGAATCCTGACAACGCTCCCCGATTGCTAAAGTATACTTACAGTCGACCAAAAAAGGAATCAAATCCTCCTACACTTGATGACACAGAGCATCATTACATGG
GCATTGAGAGGGTTGCTCGTCTGGAGGGCTTGAGTGAGGCACAGATCTCGAAGGCGCTCGAAGACCTAGTTAAAGTTGGGGCATCCTGAAGGAGTAATCTACTGTGCTAT
TGTTACTTGCAACAGACGTTAATAAATGCACGAGTGGAACTTTTGTTGAGATTGAGATGCTTTTCTGTTTACGTTCTCTTCGCTCAGCTTTTTTGAGGTTATTGCTCAAA
TGTTCATCTTGAGAAATCGTGTCTGGTAAGTATGCCTATTTGTTTATATTTCTCCGGGAGTTGTCATAATGGATACTCTTTGCAATGAGATATTAGATTGAAAAATATTA
AAACATGAGACAATAAATGGATAACTTTTAAACCACAAGGATACATTGAAAAAACAATACAACGTCAAGTACTAAAACATGATTAAAATACACAAAAAGTTAGCAAGTAT
AGCAAGCTTTCAAAGTTGTTAGGAGTTCTGGGAGTGGCTTATTTTTATTTTATAGAATATTATGACTTGTATTGTAATCTTCACATATGGACTTTATCGATTTAGTAGAT
GGAGTAGAAAATCTAGGTAACCTAAGGTAGAGAGTTCGTATGATGAAGTTTGGGAGGTAGTGAGGTTTAATGCGTCTTTGTGGGCTTTTATCACTCGGATTTTTTTTGTT
CTTATGATCTTGGTTTGATTTTGTTGGGTTGAAAGTAGTTAGTTCTTGGACTCTTCCTTTTGTTGGGCATGCTTTTTGTATGTCCATTTTTCTCAATGTATTCTCATTTT
CCTACTCGGGAAATAAATAAATAACAATATGATCAGTTTGAAGCAAAATGTTGTGATTTGATGTTTGCTTTTTTAAA
Protein sequenceShow/hide protein sequence
MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDSSSSTDTCVDYSVVTLNNIRVSSIKKNCLCYKPSRSSRNPDNAPR
LLKYTYSRPKKESNPPTLDDTEHHYMGIERVARLEGLSEAQISKALEDLVKVGAS