; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G012850 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G012850
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:23678373..23680197
RNA-Seq ExpressionLsi03G012850
SyntenyLsi03G012850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051263.1 uncharacterized protein E6C27_scaffold2143G00210 [Cucumis melo var. makuwa]3.3e-6088.57Show/hide
Query:  LIDSSCISGMESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKD
        LI S+C+ GMESNGTEFTGKR KLAVEEQG+DT +SNVLENEQ E  I+GSEEMESNIACLLEKIESFTQLVSELLESGKTAFK+L NEFEERIIAIHKD
Subjt:  LIDSSCISGMESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKD

Query:  HVEKWQHEIKELRLLDSSNEEASTILCNARNLLQNGHIQF
        HVEKWQHEIKELRL+DSSNEE STILCNARNLLQNGHIQF
Subjt:  HVEKWQHEIKELRLLDSSNEEASTILCNARNLLQNGHIQF

XP_008465341.1 PREDICTED: uncharacterized protein LOC103502983 [Cucumis melo]4.4e-5790.84Show/hide
Query:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI
        MESNGTEFTGKR KLAVEEQG+DT +SNVLENEQ E  I+GSEEMESNIACLLEKIESFTQLVSELLESGKTAFK+L NEFEERIIAIHKDHVEKWQHEI
Subjt:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI

Query:  KELRLLDSSNEEASTILCNARNLLQNGHIQF
        KELRL+DSSNEE STILCNARNLLQNGHIQF
Subjt:  KELRLLDSSNEEASTILCNARNLLQNGHIQF

XP_022972170.1 uncharacterized protein LOC111470787 isoform X1 [Cucurbita maxima]5.4e-5589.31Show/hide
Query:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI
        MESNGTEFTGKRMKLA+ EQGKDT +SN+ ENEQ E  IRGSEEMESNIA LLEKIESFTQLVSELLESGKTAFKDLSNEFEE+IIAIHK++VE+WQHEI
Subjt:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI

Query:  KELRLLDSSNEEASTILCNARNLLQNGHIQF
        KELRLLDSSNEEASTILCNARNLLQNGHIQF
Subjt:  KELRLLDSSNEEASTILCNARNLLQNGHIQF

XP_023540392.1 uncharacterized protein LOC111800780 isoform X1 [Cucurbita pepo subsp. pepo]4.9e-5690.08Show/hide
Query:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI
        MESNGTEFTGKRMKLA+EEQGKDT ISN+ ENEQ E  IRGSEEMESNIA LLEKIESFTQLVSELLESGKTAFKDLSNEFEE+IIAIHK++VE+WQHEI
Subjt:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI

Query:  KELRLLDSSNEEASTILCNARNLLQNGHIQF
        KELRLLDSSNEEAST+LCNARNLLQNGHIQF
Subjt:  KELRLLDSSNEEASTILCNARNLLQNGHIQF

XP_038903068.1 uncharacterized protein LOC120089754 isoform X2 [Benincasa hispida]3.8e-6196.18Show/hide
Query:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI
        MESNGTEFTGKRMKLA+EEQGKDTG+SNVLENEQS+ SIRGSEEMESNIACLLEKIESFTQLVSELLESGKT FKDLSNEFEERIIAIHKDHVEKWQHEI
Subjt:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI

Query:  KELRLLDSSNEEASTILCNARNLLQNGHIQF
        KELRLLDSSNEEASTILCNARNLLQNGHIQF
Subjt:  KELRLLDSSNEEASTILCNARNLLQNGHIQF

TrEMBL top hitse value%identityAlignment
A0A1S3CNM9 uncharacterized protein LOC1035029832.1e-5790.84Show/hide
Query:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI
        MESNGTEFTGKR KLAVEEQG+DT +SNVLENEQ E  I+GSEEMESNIACLLEKIESFTQLVSELLESGKTAFK+L NEFEERIIAIHKDHVEKWQHEI
Subjt:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI

Query:  KELRLLDSSNEEASTILCNARNLLQNGHIQF
        KELRL+DSSNEE STILCNARNLLQNGHIQF
Subjt:  KELRLLDSSNEEASTILCNARNLLQNGHIQF

A0A5D3E1L2 Uncharacterized protein1.6e-6088.57Show/hide
Query:  LIDSSCISGMESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKD
        LI S+C+ GMESNGTEFTGKR KLAVEEQG+DT +SNVLENEQ E  I+GSEEMESNIACLLEKIESFTQLVSELLESGKTAFK+L NEFEERIIAIHKD
Subjt:  LIDSSCISGMESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKD

Query:  HVEKWQHEIKELRLLDSSNEEASTILCNARNLLQNGHIQF
        HVEKWQHEIKELRL+DSSNEE STILCNARNLLQNGHIQF
Subjt:  HVEKWQHEIKELRLLDSSNEEASTILCNARNLLQNGHIQF

A0A6J1DG17 uncharacterized protein LOC111020126 isoform X13.4e-5587.79Show/hide
Query:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI
        M+S+GTEFTGKRMKL +EEQ KDTG+SN++ENEQ E SIRGSEEMESNI  LLEKIESFTQLVSELLESGKT FKDLSNEFEERIIAIHKDHVEKWQHEI
Subjt:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI

Query:  KELRLLDSSNEEASTILCNARNLLQNGHIQF
        KELRLLDSSNEEA+TILCNARNLLQNGH +F
Subjt:  KELRLLDSSNEEASTILCNARNLLQNGHIQF

A0A6J1EXU6 uncharacterized protein LOC111439190 isoform X14.4e-5588.55Show/hide
Query:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI
        MESNG +FTGKRMKLA+EEQGKDT +SN+ ENEQ E  IRGSEEMESNIA LLEKIESFTQLVSELLESGKTAFKDLSNEFEE+IIAIHK++VE+WQHEI
Subjt:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI

Query:  KELRLLDSSNEEASTILCNARNLLQNGHIQF
        KELRLLDSSNEEASTILCNARNLLQNGHIQF
Subjt:  KELRLLDSSNEEASTILCNARNLLQNGHIQF

A0A6J1I7S6 uncharacterized protein LOC111470787 isoform X12.6e-5589.31Show/hide
Query:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI
        MESNGTEFTGKRMKLA+ EQGKDT +SN+ ENEQ E  IRGSEEMESNIA LLEKIESFTQLVSELLESGKTAFKDLSNEFEE+IIAIHK++VE+WQHEI
Subjt:  MESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEI

Query:  KELRLLDSSNEEASTILCNARNLLQNGHIQF
        KELRLLDSSNEEASTILCNARNLLQNGHIQF
Subjt:  KELRLLDSSNEEASTILCNARNLLQNGHIQF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G03050.1 unknown protein1.5e-3160.48Show/hide
Query:  KRMKLAVEEQGKDT--GIS--NVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLL
        KRM+ + EE   D+  GIS  + +ENE++E  +  S+EME +IA +L+KIESFTQ VS LLE+GKT  K+LSNEFEER+I IHK+HVEKWQ EIKELRLL
Subjt:  KRMKLAVEEQGKDT--GIS--NVLENEQSEMSIRGSEEMESNIACLLEKIESFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLL

Query:  DSSNEEASTILCNARNLLQNGHIQ
        D+SNEE +++L NAR L+QN  I+
Subjt:  DSSNEEASTILCNARNLLQNGHIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGCGTCTAAAAAATTTAGCGCATGGCAACCTCAAATCCTTGCAATGATGTTGACTAGGTTCTTTCTCATTATACGAATATTTTTCTTTGAGAAACTTTTC
ACTATGCTACAGTTGATTGATAGCAGCTGCATATCTGGAATGGAGAGCAATGGAACTGAATTCACTGGCAAACGCATGAAATTAGCTGTGGAAGAGCAGGGAAAG
GATACAGGCATATCCAACGTTTTAGAAAATGAGCAATCTGAGATGAGCATTAGGGGATCCGAGGAGATGGAATCAAATATAGCTTGCCTACTTGAAAAGATCGAA
AGCTTCACACAGCTGGTGTCTGAACTGCTGGAGTCGGGAAAGACTGCTTTTAAAGATCTTAGTAATGAATTTGAAGAGCGAATCATAGCCATTCACAAGGATCAT
GTTGAAAAATGGCAACATGAGATTAAAGAGCTGCGGTTGCTTGATTCATCAAACGAGGAAGCCAGTACTATTTTATGCAATGCTCGAAATTTACTTCAGAATGGT
CATATCCAGTTTTGA
mRNA sequenceShow/hide mRNA sequence
GGAGAAGGCAACCAACTAGAGAAAATTGGTAAGGAATGTCGATATCGAACCGTAATTTTTCCATCTTACGAATGCTCCCTATCATGATTCATTTGATCTTGCTGT
TCTTCATTCATATGCAATTACTTCAAGTTGTCCTATAATTTGATCATCACAGTTTGGTAAACAAATAGCCGCTTGAATCAATTGCCCTAAGAATAGTGATGATCA
AACAGTTTAGTATCGATTCTTTATGAAACCTGTTCTTTTCGCCATTTTCTTCTCCTTTTCAAATCGTGCTACTGGAAAAACAACAATGATTCCGCCTTGTAATGT
CTCCCGGAATAATTTCTTGACGTTCATTTTGAGTAGACAAGACGGAAAATGTTTTGCTATGCTATCAAGAAGAAGTTTAACGTCGATTGATGTGTGTAACCTTAC
GTTTGAGTATCTTACTGAAGCTTCTGTTCTAATTTCAACTTCTTTCTACTTCAGAGTGTTACAGTTTCACACTTACTTCTACCTGTCCGGTTCCATATTCTGTTT
ATCTTTTCTCCTGAATTAGCCTAAGTTAAGCGTTTAATCAATCTACTTATTGTCGTATGAGTATCCCTCTCTCTGTGTGTGCATCAACGTATGCTTGCGTCTAAA
AAATTTAGCGCATGGCAACCTCAAATCCTTGCAATGATGTTGACTAGGTTCTTTCTCATTATACGAATATTTTTCTTTGAGAAACTTTTCACTATGCTACAGTTG
ATTGATAGCAGCTGCATATCTGGAATGGAGAGCAATGGAACTGAATTCACTGGCAAACGCATGAAATTAGCTGTGGAAGAGCAGGGAAAGGATACAGGCATATCC
AACGTTTTAGAAAATGAGCAATCTGAGATGAGCATTAGGGGATCCGAGGAGATGGAATCAAATATAGCTTGCCTACTTGAAAAGATCGAAAGCTTCACACAGCTG
GTGTCTGAACTGCTGGAGTCGGGAAAGACTGCTTTTAAAGATCTTAGTAATGAATTTGAAGAGCGAATCATAGCCATTCACAAGGATCATGTTGAAAAATGGCAA
CATGAGATTAAAGAGCTGCGGTTGCTTGATTCATCAAACGAGGAAGCCAGTACTATTTTATGCAATGCTCGAAATTTACTTCAGAATGGTCATATCCAGTTTTGA
AGGTAACTTCAAACAGCACTAGTTCCTTCCAGCATTGTTATTAGAAATTCGATTCGAACCACATTTTGTCAATGGCTTTCACTTCCAGAGAAGCTAAGCTAAAGA
GGTAAATAAGATTGTTGGTTTGAGGTGGTTGTTATTTGTTGGACTGTAGACATGGCTACTCTGTTTTTCAGTTGATACTTGTTAGATGCTTCCACTTTCATTATA
TTTGTTAAGTGTAACTGAAACCAATTCACTGAATCACTATAGTTTTTCTTCCAATCTCTATTTTATATATAAGAGAAATGGAAGTAAACAGGTTGGTTTAAAAAA
AGGCACCATTTTATCATGAAAGTATTTCCTTCTCTACTCTAAAATGTACATCCTGGCAAA
Protein sequenceShow/hide protein sequence
MLASKKFSAWQPQILAMMLTRFFLIIRIFFFEKLFTMLQLIDSSCISGMESNGTEFTGKRMKLAVEEQGKDTGISNVLENEQSEMSIRGSEEMESNIACLLEKIE
SFTQLVSELLESGKTAFKDLSNEFEERIIAIHKDHVEKWQHEIKELRLLDSSNEEASTILCNARNLLQNGHIQF