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Lsi03G012910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G012910
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:23730699..23731027
RNA-Seq ExpressionLsi03G012910
SyntenyLsi03G012910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651697.1 hypothetical protein Csa_006343 [Cucumis sativus]1.2e-1964.47Show/hide
Query:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCN
        M T K  TVSI++LM+  C VS+ K D+  ++C+RPCSDTYDD+SCYNDCIR N GAGFCY KLP+T  +KDCCCN
Subjt:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCN

KAE8651701.1 hypothetical protein Csa_006400, partial [Cucumis sativus]6.3e-1367.92Show/hide
Query:  AKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCN
        AK D+  M C++PCSDTYDD+SCYNDCI+ N GAGFCY KLP+T  +KDCCC+
Subjt:  AKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCN

KAG6586428.1 hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]5.7e-2268.42Show/hide
Query:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIYMSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCNN
        M + K FTV  IV+MMF  F SSAK D++M CIRPC D +DDDSCY+DC+R NKGAGFCY KLP+ +NEKDCCCNN
Subjt:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIYMSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCNN

KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]1.7e-1047.37Show/hide
Query:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIYMSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCNN
        M T K F VS++V + F+CF SS + D   +C+ PCS+   D  C   CI  ++GAGFC  KLP  S+ K CCCNN
Subjt:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIYMSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCNN

KGN61228.1 hypothetical protein Csa_006463 [Cucumis sativus]2.0e-1963.16Show/hide
Query:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCN
        M T K  T+SI+VLM+F C  S+ K D+  + C+RPCSDTYDD+SCYNDCI+ N GAGFCY KLP+T  +KDCCCN
Subjt:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCN

TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein8.3e-1147.37Show/hide
Query:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIYMSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCNN
        M T K F VS++V + F+CF SS + D   +C+ PCS+   D  C   CI  ++GAGFC  KLP  S+ K CCCNN
Subjt:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIYMSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCNN

A0A0A0LHG9 Uncharacterized protein9.8e-2063.16Show/hide
Query:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCN
        M T K  T+SI+VLM+F C  S+ K D+  + C+RPCSDTYDD+SCYNDCI+ N GAGFCY KLP+T  +KDCCCN
Subjt:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCN

A0A0A0LJG5 Uncharacterized protein2.2e-1962.34Show/hide
Query:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCNN
        M T K  T+SI+VL++F C VS+ K D+  + C+RPC DTYDD+SCYNDCIR N GAGFCY KLP+T  +KDCCCN+
Subjt:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCNN

A0A0A0LKF5 Uncharacterized protein1.6e-1472.22Show/hide
Query:  SAKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCN
        +AK DI  + C+RPCSDTYDD+SCYNDCIR N GAGFCY KLP+T  +KDCCCN
Subjt:  SAKEDIY-MSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCN

A0A5A7TJH1 Uncharacterized protein7.3e-0743.24Show/hide
Query:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIYMSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCC
        M T K   V + + ++  CFV+ ++     +CIRPCS+TY   SCY DC   NKG G C  K P  S+E  CCC
Subjt:  MTTHKFFTVSIIVLMMFTCFVSSAKEDIYMSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACTCATAAGTTTTTTACGGTGTCTATTATTGTCTTGATGATGTTCACTTGTTTTGTTTCATCAGCAAAAGAAGACATATACATGAGTTGTATTCGACCATGTTC
TGACACTTACGACGATGATTCATGTTATAATGATTGCATCCGACATAACAAAGGTGCTGGATTTTGCTATCTCAAGCTGCCTAACACTTCTAATGAAAAAGATTGTTGTT
GCAATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGACTCATAAGTTTTTTACGGTGTCTATTATTGTCTTGATGATGTTCACTTGTTTTGTTTCATCAGCAAAAGAAGACATATACATGAGTTGTATTCGACCATGTTC
TGACACTTACGACGATGATTCATGTTATAATGATTGCATCCGACATAACAAAGGTGCTGGATTTTGCTATCTCAAGCTGCCTAACACTTCTAATGAAAAAGATTGTTGTT
GCAATAATTGA
Protein sequenceShow/hide protein sequence
MTTHKFFTVSIIVLMMFTCFVSSAKEDIYMSCIRPCSDTYDDDSCYNDCIRHNKGAGFCYLKLPNTSNEKDCCCNN