; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G012930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G012930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCCR4-NOT transcription complex subunit 3-like isoform X1
Genome locationchr03:23757945..23764223
RNA-Seq ExpressionLsi03G012930
SyntenyLsi03G012930
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
InterPro domainsIPR007282 - NOT2/NOT3/NOT5, C-terminal
IPR038635 - CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamily
IPR040168 - Not2/Not3/Not5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051276.1 general negative regulator of transcription subunit 3 [Cucumis melo var. makuwa]3.0e-14294.18Show/hide
Query:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
        DV HSKVEEE    QQQQQQQSL EDTTDSAA SVLGKNLMS+DDLKGSY VDTPVG   SLTETASV+REDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
Subjt:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL

Query:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
        GAIGDNL GS+MTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPA+TPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
Subjt:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL

Query:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
        AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
Subjt:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI

XP_004141143.1 general negative regulator of transcription subunit 3 isoform X1 [Cucumis sativus]2.8e-14395.27Show/hide
Query:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
        DV HSKVEEE    QQQQQQQSL EDTTDSAA SVLGKNLMS+DDLKGSY VDTPVG   SLTETASV+REDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
Subjt:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL

Query:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
        GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
Subjt:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL

Query:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
        AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
Subjt:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI

XP_008465329.1 PREDICTED: general negative regulator of transcription subunit 3 [Cucumis melo]3.0e-14294.18Show/hide
Query:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
        DV HSKVEEE    QQQQQQQSL EDTTDSAA SVLGKNLMS+DDLKGSY VDTPVG   SLTETASV+REDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
Subjt:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL

Query:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
        GAIGDNL GS+MTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPA+TPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
Subjt:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL

Query:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
        AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
Subjt:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI

XP_031738280.1 CCR4-NOT transcription complex subunit 3 isoform X2 [Cucumis sativus]2.8e-14395.27Show/hide
Query:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
        DV HSKVEEE    QQQQQQQSL EDTTDSAA SVLGKNLMS+DDLKGSY VDTPVG   SLTETASV+REDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
Subjt:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL

Query:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
        GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
Subjt:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL

Query:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
        AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
Subjt:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI

XP_038904035.1 general negative regulator of transcription subunit 3 [Benincasa hispida]2.7e-14697.06Show/hide
Query:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVGSLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDLGAI
        DVAHSKVEEE    QQQQQQQSLPEDTTDSAAGSVL KNLMS+DDLKGSYPVDTPVGSLTETASVSREDDLSPGQPLQ GQPSG LGVIGRRSVSDLGAI
Subjt:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVGSLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDLGAI

Query:  GDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAAR
        GDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAAR
Subjt:  GDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAAR

Query:  ELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
        ELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
Subjt:  ELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI

TrEMBL top hitse value%identityAlignment
A0A0A0LI87 Uncharacterized protein1.3e-14395.27Show/hide
Query:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
        DV HSKVEEE    QQQQQQQSL EDTTDSAA SVLGKNLMS+DDLKGSY VDTPVG   SLTETASV+REDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
Subjt:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL

Query:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
        GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
Subjt:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL

Query:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
        AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
Subjt:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI

A0A1S3CNL9 general negative regulator of transcription subunit 31.5e-14294.18Show/hide
Query:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
        DV HSKVEEE    QQQQQQQSL EDTTDSAA SVLGKNLMS+DDLKGSY VDTPVG   SLTETASV+REDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
Subjt:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL

Query:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
        GAIGDNL GS+MTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPA+TPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
Subjt:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL

Query:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
        AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
Subjt:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI

A0A5A7UAP5 General negative regulator of transcription subunit 31.5e-14294.18Show/hide
Query:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
        DV HSKVEEE    QQQQQQQSL EDTTDSAA SVLGKNLMS+DDLKGSY VDTPVG   SLTETASV+REDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
Subjt:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL

Query:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
        GAIGDNL GS+MTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPA+TPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
Subjt:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL

Query:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
        AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
Subjt:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI

A0A6J1DRP6 general negative regulator of transcription subunit 31.2e-14192.36Show/hide
Query:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL
        DVAH+K E+E    QQQQQQQS+PEDT+D AAGSVLGKNLMS+DDLKGSYP+D PVG   SLTETASVSREDDLSPGQPLQPGQPSG LGVIGRRSVSDL
Subjt:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDL

Query:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
        GAIGDNLGG SMTTGG+HDQ YNLQMLEAA+YKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL
Subjt:  GAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYL

Query:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
        AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
Subjt:  AARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI

A0A6J1EY06 CCR4-NOT transcription complex subunit 3-like isoform X11.4e-14091.81Show/hide
Query:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTD------SAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGR
        DVAHSKVEEE   QQQQQQQQSLPEDTTD      SA+ SVLGKNLM++DDLKGSY VDTP G   SLTETASVSREDDLSPGQPLQPGQPSG LGVIGR
Subjt:  DVAHSKVEEEQQQQQQQQQQQSLPEDTTD------SAAGSVLGKNLMSEDDLKGSYPVDTPVG---SLTETASVSREDDLSPGQPLQPGQPSGGLGVIGR

Query:  RSVSDLGAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPN
        RSVSDLGAIGD+LGGSSM TGGMHDQFYNLQMLEAA+YKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPA WDRLGLETYGTDTLFFAFYYQPN
Subjt:  RSVSDLGAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPN

Query:  TYQQYLAARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
        TYQQYLAARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
Subjt:  TYQQYLAARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI

SwissProt top hitse value%identityAlignment
O13870 General negative regulator of transcription subunit 33.5e-3248.92Show/hide
Query:  LPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELKKQSWRYHRKYQTWFQRHEEPKVATDEY
        +P   D+ +P+ Y P+ P   P  YPQ   P+ ++  +      E    DTLF+ FYY+P TYQQY+A +ELKKQSWR+H+KY TWFQRHEEPK+ TDE+
Subjt:  LPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELKKQSWRYHRKYQTWFQRHEEPKVATDEY

Query:  EQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDE
        E G+Y YFDF       +  W QR K +F F Y YLED+
Subjt:  EQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDE

O75175 CCR4-NOT transcription complex subunit 34.7e-3752.94Show/hide
Query:  DQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELKKQSWRYHRKYQT
        +Q Y   M EAA++ +P P DSER R Y PR+P  TPP + Q+  P  +    + RL      T+TLFF FYY   T  QYLAA+ LKKQSWR+H KY  
Subjt:  DQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELKKQSWRYHRKYQT

Query:  WFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLED
        WFQRHEEPK  TDE+EQGTY+YFD+          W QR K  FTFEY YLED
Subjt:  WFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLED

Q8K0V4 CCR4-NOT transcription complex subunit 34.7e-3751.52Show/hide
Query:  LGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELK
        LG  S+T     +Q Y   M EAA++ +P P DSER R Y PR+P  TPP + Q+  P  +    + RL      T+TLFF FYY   T  QYLAA+ LK
Subjt:  LGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELK

Query:  KQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLED
        KQSWR+H KY  WFQRHEEPK  TDE+EQGTY+YFD+          W QR K  FTFEY YLED
Subjt:  KQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLED

Arabidopsis top hitse value%identityAlignment
AT1G07705.2 NOT2 / NOT3 / NOT5 family6.2e-0834.78Show/hide
Query:  PAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFD
        P+   P +   Q     NP    +        +TLF+ FY  P    Q  AA EL  + W YH++++ WF R  EP V T+ YE+G+Y  FD
Subjt:  PAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELKKQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFD

AT5G18230.1 transcription regulator NOT2/NOT3/NOT5 family protein1.6e-8864.18Show/hide
Query:  VEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVGS---LTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDLGAIGDN
        V +    +   Q QQ+LP+D+   AA     K + SEDD K  +  DTP G    + +   VS   D SPGQP+QPGQ S  LGVIGRRS S+LGAIGD 
Subjt:  VEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVGS---LTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDLGAIGDN

Query:  LGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELK
                G MHDQ +NLQMLEAAFYK PQP DSERPR Y+PR+PAITP ++PQ QAPIINNP LW+RLG + YGTDTLFFAFYYQ N+YQQYLAA+ELK
Subjt:  LGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELK

Query:  KQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQH-GWCQRIKTEFTFEYNYLEDEL
        KQSWRYHRK+ TWFQRH+EPK+ATDEYEQG YVYFDF    D+ Q  GWCQRIK EFTFEY+YLEDEL
Subjt:  KQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQH-GWCQRIKTEFTFEYNYLEDEL

AT5G18230.2 transcription regulator NOT2/NOT3/NOT5 family protein1.6e-8864.18Show/hide
Query:  VEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVGS---LTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDLGAIGDN
        V +    +   Q QQ+LP+D+   AA     K + SEDD K  +  DTP G    + +   VS   D SPGQP+QPGQ S  LGVIGRRS S+LGAIGD 
Subjt:  VEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVGS---LTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDLGAIGDN

Query:  LGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELK
                G MHDQ +NLQMLEAAFYK PQP DSERPR Y+PR+PAITP ++PQ QAPIINNP LW+RLG + YGTDTLFFAFYYQ N+YQQYLAA+ELK
Subjt:  LGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELK

Query:  KQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQH-GWCQRIKTEFTFEYNYLEDEL
        KQSWRYHRK+ TWFQRH+EPK+ATDEYEQG YVYFDF    D+ Q  GWCQRIK EFTFEY+YLEDEL
Subjt:  KQSWRYHRKYQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQH-GWCQRIKTEFTFEYNYLEDEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGATGTTGCCCATTCAAAAGTTGAAGAGGAGCAGCAGCAGCAACAGCAACAGCAACAGCAGCAAAGTTTACCTGAGGATACTACTGATTCTGCTGCCGGTTCTGT
CCTTGGAAAGAATCTGATGAGCGAGGATGATTTAAAAGGATCATATCCAGTAGATACTCCAGTTGGATCATTGACTGAGACAGCTTCAGTGTCGAGAGAAGATGACCTTT
CTCCTGGTCAACCTTTACAGCCTGGCCAACCTTCTGGAGGTCTTGGTGTCATTGGCCGAAGAAGTGTTTCTGACTTGGGTGCCATTGGTGATAACCTTGGTGGGTCCTCG
ATGACTACTGGAGGAATGCATGATCAATTCTATAATTTGCAAATGCTTGAAGCTGCATTCTACAAGCTACCTCAGCCGAAAGACTCAGAGCGTCCAAGGAGCTATACTCC
AAGGCACCCTGCAATTACTCCTCCGAGCTATCCTCAAGTACAGGCCCCTATTATAAACAATCCTGCTTTATGGGACCGATTAGGTCTAGAGACCTATGGCACTGACACAT
TGTTCTTTGCATTTTACTATCAACCGAACACCTATCAACAATATTTGGCTGCTAGAGAATTAAAGAAGCAATCTTGGAGATACCACAGAAAATATCAGACATGGTTTCAA
CGACATGAAGAGCCAAAAGTTGCTACAGATGAATATGAGCAAGGAACGTATGTGTACTTCGATTTCCATGTTAACAATGATGACCTACAACATGGATGGTGCCAAAGGAT
TAAAACTGAGTTCACTTTTGAGTATAACTACCTCGAAGATGAACTCAATATATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTGATGTTGCCCATTCAAAAGTTGAAGAGGAGCAGCAGCAGCAACAGCAACAGCAACAGCAGCAAAGTTTACCTGAGGATACTACTGATTCTGCTGCCGGTTCTGT
CCTTGGAAAGAATCTGATGAGCGAGGATGATTTAAAAGGATCATATCCAGTAGATACTCCAGTTGGATCATTGACTGAGACAGCTTCAGTGTCGAGAGAAGATGACCTTT
CTCCTGGTCAACCTTTACAGCCTGGCCAACCTTCTGGAGGTCTTGGTGTCATTGGCCGAAGAAGTGTTTCTGACTTGGGTGCCATTGGTGATAACCTTGGTGGGTCCTCG
ATGACTACTGGAGGAATGCATGATCAATTCTATAATTTGCAAATGCTTGAAGCTGCATTCTACAAGCTACCTCAGCCGAAAGACTCAGAGCGTCCAAGGAGCTATACTCC
AAGGCACCCTGCAATTACTCCTCCGAGCTATCCTCAAGTACAGGCCCCTATTATAAACAATCCTGCTTTATGGGACCGATTAGGTCTAGAGACCTATGGCACTGACACAT
TGTTCTTTGCATTTTACTATCAACCGAACACCTATCAACAATATTTGGCTGCTAGAGAATTAAAGAAGCAATCTTGGAGATACCACAGAAAATATCAGACATGGTTTCAA
CGACATGAAGAGCCAAAAGTTGCTACAGATGAATATGAGCAAGGAACGTATGTGTACTTCGATTTCCATGTTAACAATGATGACCTACAACATGGATGGTGCCAAAGGAT
TAAAACTGAGTTCACTTTTGAGTATAACTACCTCGAAGATGAACTCAATATATAGAGAAACTAGAAAGAGAGATATATCCGTAGCTTGACAAGTACTTGTATTAATTATA
GTGGATAATGGGTGAAAAGAATGGAAGTCAGCACATTTTAGTCTTTGGTTCATTATCAGGGAAGGTTGCAGTCAGTTAAAGGTTGACTTAGCCTTTTTGTTTCCCTTTCT
GTTTTTAATTGTAAAGGACACATGGTTATCAGCTATAAAGATATTATATTAACATGCCTTCCCTTATAATATTTGTCTTTTTGTGGTGGTCATTGGATCGGATCAGACCC
TTTACTAAGCTATTTTATAATAGACTCTGGAGTGAGAACTTAGATTTTCCTAAGCTACAACAGGCCCAGGAGAAAATGAATTAAATCTCAACCTTAGCTTTAGTCTTGAC
AACTTATCTGAGTCGTATTTAATGATTTTGATTCCCAAGATCCATACTTGTTTTCATGTAATAAATGTTCTCAAGAAGCATTTAACAGTACCTCTGAGTTTTAAGAAGTA
TGGGCCTATCATCTGAATACATGGGCCTTTTACAGTGTAAAGATAATCCTTTTTCACAGATACATTCTCAACTTTTTGGTGCATGGATGAATTGATGGGAATGTATGGAG
GAATGGTTATTGCTTTCTGATGCGATTTATTATTATTAGTGCCTTGAAAATATTAGTCGACCAGTACAAATAAATCATGTATGTTCATCC
Protein sequenceShow/hide protein sequence
MRDVAHSKVEEEQQQQQQQQQQQSLPEDTTDSAAGSVLGKNLMSEDDLKGSYPVDTPVGSLTETASVSREDDLSPGQPLQPGQPSGGLGVIGRRSVSDLGAIGDNLGGSS
MTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITPPSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELKKQSWRYHRKYQTWFQ
RHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI