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Lsi03G013040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G013040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:23868222..23868620
RNA-Seq ExpressionLsi03G013040
SyntenyLsi03G013040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057194.1 hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa]5.6e-2554.76Show/hide
Query:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV
        MGLDDWEL+DCHED E+K R +++                  +SGQKLI D +KE     E +VEEEEK NSRR    ++A EK+KQ GR  +CS GIAV
Subjt:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV

Query:  AATICTVLLGSHSHRQGGASLVNKRH
        AATIC+VLLGSHSH  GG + VNKRH
Subjt:  AATICTVLLGSHSHRQGGASLVNKRH
KGN59752.1 hypothetical protein Csa_001232 [Cucumis sativus]1.4e-2857.14Show/hide
Query:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV
        MGLDDWEL+DCHED +++     +N+V               +SGQKLIGD + E     E DVEEEEKV+SR     ++AMEKRKQWGRT +CS GIAV
Subjt:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV

Query:  AATICTVLLGSHSHRQGGASLVNKRH
        AATIC+VLLGSHSH  GG + VNKRH
Subjt:  AATICTVLLGSHSHRQGGASLVNKRH
TrEMBL top hitse value%identityAlignment
A0A0A0LG95 Uncharacterized protein6.9e-2957.14Show/hide
Query:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV
        MGLDDWEL+DCHED +++     +N+V               +SGQKLIGD + E     E DVEEEEKV+SR     ++AMEKRKQWGRT +CS GIAV
Subjt:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV

Query:  AATICTVLLGSHSHRQGGASLVNKRH
        AATIC+VLLGSHSH  GG + VNKRH
Subjt:  AATICTVLLGSHSHRQGGASLVNKRH
A0A5D3D5E0 Uncharacterized protein2.7e-2554.76Show/hide
Query:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV
        MGLDDWEL+DCHED E+K R +++                  +SGQKLI D +KE     E +VEEEEK NSRR    ++A EK+KQ GR  +CS GIAV
Subjt:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV

Query:  AATICTVLLGSHSHRQGGASLVNKRH
        AATIC+VLLGSHSH  GG + VNKRH
Subjt:  AATICTVLLGSHSHRQGGASLVNKRH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTCGACGATTGGGAACTCATTGATTGCCATGAAGATGACGAGAAAAAGCATCGCAGTGACGACCAGAACATCGTTTTCGCTCTAAACCATACCGATCAATCTAT
TGTTTCTGTTTCGAAAGTTTCCGGCCAGAAATTGATCGGCGACATGAGAAAGGAGTCGGGAACCGCCGTGGAATTAGATGTGGAGGAGGAGGAAAAAGTAAATTCAAGAA
GAATGAATATGGCGAATCTGGCGATGGAGAAGAGGAAACAATGGGGGAGAACGGCAATTTGTTCGGTTGGAATTGCTGTGGCGGCTACGATTTGCACTGTGTTATTGGGA
AGCCATAGCCACCGCCAAGGCGGAGCTTCGCTTGTGAATAAGCGCCATTCTTTGAAGGCTGAACCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTCGACGATTGGGAACTCATTGATTGCCATGAAGATGACGAGAAAAAGCATCGCAGTGACGACCAGAACATCGTTTTCGCTCTAAACCATACCGATCAATCTAT
TGTTTCTGTTTCGAAAGTTTCCGGCCAGAAATTGATCGGCGACATGAGAAAGGAGTCGGGAACCGCCGTGGAATTAGATGTGGAGGAGGAGGAAAAAGTAAATTCAAGAA
GAATGAATATGGCGAATCTGGCGATGGAGAAGAGGAAACAATGGGGGAGAACGGCAATTTGTTCGGTTGGAATTGCTGTGGCGGCTACGATTTGCACTGTGTTATTGGGA
AGCCATAGCCACCGCCAAGGCGGAGCTTCGCTTGTGAATAAGCGCCATTCTTTGAAGGCTGAACCCTGA
Protein sequenceShow/hide protein sequence
MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAVAATICTVLLG
SHSHRQGGASLVNKRHSLKAEP